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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:62.9TPM
GTEx:4.6RPKM
FANTOM5:3.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA007338

 

Antibody CAB018603

 

Antibody CAB019276

 

Adipocytes

Not detected   Not detected   Not detected  

Glandular cells

Low   Not detected   Medium  

Myoepithelial cells

Not detected   Not detected   Not detected  
     
     
     

BREAST - HPA RNA-seq

Average TPM

62.9

overview Female, age 52
Sample 1
TPM: 22.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 36.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 158.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 34.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

4.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 4.6
Samples: 214

Max RPKM: 62
Min RPKM: 0.1
Std RPKM: 6
Median RPKM: 2.8
GTEX-14ABY-2126-SM-5QGQZ 62.0
GTEX-YFC4-1426-SM-5IFJG 34.2
GTEX-11PRG-0826-SM-5EQ6A 31.6
GTEX-11P7K-0726-SM-5EGKX 24.5
GTEX-13NZB-2126-SM-5MR4Y 18.3
GTEX-XOT4-0726-SM-4GIAW 15.2
GTEX-13N11-1726-SM-5J1OJ 13.7
GTEX-11DXW-0626-SM-5N9ER 12.8
GTEX-13FTY-2226-SM-5J1ND 12.0
GTEX-111YS-1926-SM-5GICC 11.7
GTEX-ZEX8-2226-SM-57WC6 11.6
GTEX-WYBS-0926-SM-3NM94 11.4
GTEX-13OW5-2226-SM-5L3HC 11.1
GTEX-T5JW-2026-SM-4DM63 11.1
GTEX-13O3P-0826-SM-5L3DH 10.9
GTEX-147F4-2826-SM-5NQBN 10.8
GTEX-ZC5H-2626-SM-5J2MG 10.8
GTEX-ZTX8-1226-SM-4YCE9 10.8
GTEX-ZAJG-0626-SM-5HL8X 10.7
GTEX-ZY6K-1626-SM-5GZWV 10.5
GTEX-SIU7-1626-SM-4BRUK 10.3
GTEX-131YS-0626-SM-5EGKL 9.6
GTEX-13PL6-2926-SM-5L3I2 9.4
GTEX-U3ZH-1426-SM-4DXSR 9.3
GTEX-ZF2S-2026-SM-5E461 9.1
GTEX-11WQC-1726-SM-5GU4W 9.0
GTEX-1269C-2426-SM-5FQSN 9.0
GTEX-14AS3-1626-SM-5S2OY 9.0
GTEX-11EMC-2026-SM-5A5JV 8.7
GTEX-145LT-0726-SM-5S2VM 8.7
GTEX-ZU9S-1926-SM-5NQBP 8.6
GTEX-R3RS-0626-SM-48FE1 8.4
GTEX-ZVT2-1826-SM-5NQ8W 8.4
GTEX-S4P3-1326-SM-4AD6V 8.1
GTEX-1399U-1826-SM-5PNZ1 8.0
GTEX-X4EP-2926-SM-3P5YQ 8.0
GTEX-T2IS-1526-SM-32QPR 7.9
GTEX-ZVTK-0326-SM-51MRR 7.9
GTEX-13CF2-2026-SM-5K7VI 7.7
GTEX-T5JC-2126-SM-32PMO 7.6
GTEX-X15G-1626-SM-3NMB3 7.6
GTEX-WYVS-1726-SM-3NMAY 7.5
GTEX-11EI6-0626-SM-5985T 7.3
GTEX-VUSG-2226-SM-4KKZO 7.3
GTEX-Y3IK-2326-SM-4WWDT 7.2
GTEX-ZXES-0826-SM-5E43C 6.9
GTEX-U3ZN-1926-SM-4DXSG 6.6
GTEX-ZLV1-1426-SM-4WWES 6.6
GTEX-13QIC-2326-SM-5LU5N 6.5
GTEX-R55F-1726-SM-2TF4R 6.5
GTEX-ZF29-1926-SM-5S2P1 6.3
GTEX-ZVT4-1026-SM-57WC4 6.3
GTEX-S341-1526-SM-4AD6K 6.2
GTEX-QEL4-2126-SM-447AE 6.0
GTEX-1122O-1226-SM-5H113 5.7
GTEX-11TT1-2126-SM-5GU5Y 5.7
GTEX-WRHU-0326-SM-3MJFY 5.7
GTEX-UJHI-1426-SM-3DB9C 5.6
GTEX-XBED-1626-SM-47JYN 5.6
GTEX-XMD1-0826-SM-4AT52 5.6
GTEX-131XW-0726-SM-5EGK3 5.4
GTEX-13NZ9-1026-SM-5MR5K 5.3
GTEX-13O3O-0826-SM-5K7WE 5.2
GTEX-ZZPU-0626-SM-5E43T 5.2
GTEX-13FHO-0826-SM-5L3E8 5.1
GTEX-U412-1826-SM-4DXTJ 5.1
GTEX-XUJ4-1926-SM-4BOOV 5.1
GTEX-TMMY-0726-SM-33HBE 5.0
GTEX-12ZZX-1126-SM-5EGKB 4.9
GTEX-T6MN-0726-SM-32PML 4.9
GTEX-ZF3C-2326-SM-5S2MZ 4.9
GTEX-13W3W-1226-SM-5LU4H 4.8
GTEX-WI4N-1426-SM-3LK7H 4.8
GTEX-1211K-1926-SM-5EQLB 4.6
GTEX-TML8-1226-SM-32QON 4.6
GTEX-UPK5-2326-SM-3P5Z8 4.6
GTEX-XMD2-0926-SM-4WWEF 4.6
GTEX-XUW1-2326-SM-4BOO5 4.6
GTEX-ZVZQ-0826-SM-51MRF 4.6
GTEX-RU72-0626-SM-46MUI 4.5
GTEX-132Q8-1426-SM-5EGK7 4.4
GTEX-QEG5-0726-SM-4R1JQ 4.4
GTEX-133LE-1726-SM-5K7VQ 4.3
GTEX-Y5LM-1726-SM-4VDSX 4.3
GTEX-Y8LW-1626-SM-5IFHX 4.2
GTEX-XUZC-1626-SM-4BRVP 4.1
GTEX-13NZ8-0126-SM-5IJCT 4.0
GTEX-ZTTD-1026-SM-51MRD 4.0
GTEX-13113-1726-SM-5GCOO 3.8
GTEX-QDT8-0626-SM-48TYW 3.7
GTEX-11ZTT-2326-SM-5EQLG 3.6
GTEX-T2YK-2226-SM-32QPT 3.6
GTEX-ZV7C-1826-SM-5NQ83 3.6
GTEX-ZVE2-1226-SM-5NQ8R 3.6
GTEX-RWS6-1926-SM-47JXY 3.5
GTEX-11GS4-2126-SM-5A5KR 3.4
GTEX-WYJK-1326-SM-3NB2T 3.3
GTEX-QVJO-1826-SM-447C9 3.2
GTEX-R53T-1526-SM-48FEK 3.2
GTEX-ZYWO-2326-SM-5GZY4 3.2
GTEX-11EM3-1326-SM-5N9C6 3.1
GTEX-13O3Q-2226-SM-5KM4O 3.1
GTEX-1313W-0826-SM-5EQ4T 3.0
GTEX-XYKS-1326-SM-4BRUN 3.0
GTEX-W5X1-2326-SM-3GIL6 2.9
GTEX-Y114-2026-SM-4TT7L 2.9
GTEX-1117F-2826-SM-5GZXL 2.8
GTEX-WXYG-2226-SM-4E3IM 2.8
GTEX-YB5K-1626-SM-5IFIN 2.8
GTEX-1314G-1226-SM-5BC6D 2.7
GTEX-139T6-1626-SM-5PNYZ 2.7
GTEX-139T8-0826-SM-5L3DE 2.7
GTEX-13D11-1026-SM-5IJFB 2.7
GTEX-Q2AG-0326-SM-48U1O 2.7
GTEX-XQ3S-1326-SM-4BOPQ 2.7
GTEX-ZYFC-0826-SM-5E44K 2.6
GTEX-11P81-1926-SM-5BC53 2.5
GTEX-S4UY-0726-SM-4AD6X 2.5
GTEX-VJWN-0726-SM-3GIJ8 2.3
GTEX-Y5V5-2126-SM-4WWFO 2.3
GTEX-ZYT6-0126-SM-5E45J 2.3
GTEX-1192X-2326-SM-5987X 2.2
GTEX-11I78-2226-SM-5PNYA 2.2
GTEX-13CF3-2126-SM-5IFJP 2.2
GTEX-UTHO-1026-SM-3GAF7 2.2
GTEX-11DXY-2326-SM-5GICW 2.1
GTEX-11NV4-2026-SM-5N9DG 2.1
GTEX-PSDG-1626-SM-48TCQ 2.1
GTEX-139TU-0626-SM-5KM3X 2.0
GTEX-144GM-0926-SM-5O994 2.0
GTEX-U8XE-0826-SM-4E3J1 2.0
GTEX-Y111-2026-SM-4SOJA 2.0
GTEX-11OF3-1926-SM-59889 1.9
GTEX-13OW8-0226-SM-5K7UP 1.9
GTEX-SE5C-2126-SM-4BRUJ 1.9
GTEX-ZPIC-1126-SM-5BC7F 1.9
GTEX-ZYW4-0826-SM-5GIDG 1.9
GTEX-12WSK-2226-SM-5GCO5 1.8
GTEX-132AR-0826-SM-5EGK6 1.8
GTEX-132NY-0826-SM-5K7Y7 1.8
GTEX-146FH-0826-SM-5SI8T 1.8
GTEX-ZDXO-0126-SM-5S2ND 1.8
GTEX-S33H-0326-SM-4AD6N 1.7
GTEX-ZAB4-2526-SM-5HL8M 1.7
GTEX-T6MO-0326-SM-32QOK 1.6
GTEX-XMK1-1126-SM-4IHJ8 1.6
GTEX-YJ8O-2226-SM-5IFHW 1.6
GTEX-11ONC-2126-SM-5HL6E 1.5
GTEX-REY6-2426-SM-48FF5 1.5
GTEX-S7SE-0826-SM-4AT4D 1.5
GTEX-117YX-1426-SM-5H12H 1.4
GTEX-11P82-1326-SM-5HL62 1.4
GTEX-12KS4-0126-SM-5Q5A5 1.4
GTEX-ZDYS-1126-SM-5K7UB 1.4
GTEX-11DXZ-1926-SM-5GZZL 1.3
GTEX-12WSN-1326-SM-5GCNT 1.3
GTEX-13W46-0826-SM-5LU3H 1.3
GTEX-QMRM-1626-SM-4R1KV 1.3
GTEX-XV7Q-2326-SM-4BRVZ 1.3
GTEX-ZQG8-0726-SM-5P9H9 1.3
GTEX-11GSO-1926-SM-5A5K3 1.2
GTEX-11O72-2126-SM-5N9FO 1.2
GTEX-145MO-0826-SM-5NQBL 1.2
GTEX-S32W-2026-SM-4AD6E 1.2
GTEX-S4Q7-1126-SM-4AD6R 1.2
GTEX-TKQ2-1826-SM-33HB2 1.2
GTEX-X261-0626-SM-3NMD9 1.2
GTEX-WOFL-0826-SM-3MJG1 1.1
GTEX-ZUA1-1526-SM-59HLS 1.1
GTEX-11LCK-2426-SM-5HL5F 1.0
GTEX-12BJ1-1826-SM-5HL9N 1.0
GTEX-13PVQ-1026-SM-5KM3M 1.0
GTEX-Y5V6-2126-SM-4WWFX 1.0
GTEX-Y8E4-1626-SM-5S2MW 1.0
GTEX-ZDTT-2126-SM-5S2OJ 1.0
GTEX-11ZUS-0826-SM-5FQUY 0.9
GTEX-13N1W-0626-SM-5MR4U 0.9
GTEX-13S86-1226-SM-5S2OA 0.9
GTEX-117XS-1926-SM-5GICO 0.8
GTEX-11EQ9-1826-SM-5Q5AJ 0.8
GTEX-145ME-1526-SM-5Q5F2 0.8
GTEX-RUSQ-2026-SM-4GIAK 0.8
GTEX-WY7C-2726-SM-3NB3P 0.8
GTEX-X4XY-0926-SM-4E3JD 0.8
GTEX-XGQ4-0926-SM-4AT4U 0.8
GTEX-Y3I4-1526-SM-4TT7K 0.8
GTEX-Y9LG-1426-SM-5IFJZ 0.8
GTEX-YB5E-1726-SM-5IFJ3 0.8
GTEX-145MN-1926-SM-5SIAI 0.7
GTEX-14E6E-1326-SM-5S2NR 0.7
GTEX-YFCO-1826-SM-4W1YH 0.7
GTEX-ZV6S-1826-SM-5NQ8D 0.7
GTEX-ZWKS-2826-SM-5NQ74 0.7
GTEX-11WQK-2426-SM-5GU5C 0.6
GTEX-13FTW-1426-SM-5LZWZ 0.6
GTEX-144GL-2026-SM-5LU3O 0.6
GTEX-R55D-0826-SM-48FEA 0.6
GTEX-ZA64-1526-SM-5CVMD 0.6
GTEX-11DZ1-0326-SM-5N9BN 0.5
GTEX-11TUW-1826-SM-5BC5D 0.5
GTEX-12WSB-0626-SM-59HJO 0.5
GTEX-13FTX-1126-SM-5N9EN 0.5
GTEX-ZT9W-2026-SM-51MRA 0.5
GTEX-11NSD-0926-SM-5N9DR 0.4
GTEX-12WSM-1726-SM-5BC6J 0.4
GTEX-14753-2426-SM-5LU8U 0.4
GTEX-XQ8I-2426-SM-4WAXY 0.4
GTEX-ZLFU-2126-SM-4WWEV 0.4
GTEX-ZZ64-1226-SM-5E43R 0.4
GTEX-WFON-1826-SM-3GILG 0.3
GTEX-13O61-1826-SM-5KM4I 0.2
GTEX-YEC3-1026-SM-5IFI5 0.2
GTEX-ZQUD-1926-SM-51MSA 0.2
GTEX-TKQ1-0226-SM-33HB5 0.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

3.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 3.7
FF:10080-102A8 77 years, female 3.7

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