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Field

Term
Gene name

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Subclass

Chromosome

External id

In atlas

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Reliability

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Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA URINARY BLADDER

GENE/PROTEIN

Antibody validation


Dictionary

Urinary bladder

URINARY BLADDER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.3TPM
GTEx:9.8RPKM
FANTOM5:14.7Tags Per Million

URINARY BLADDER - Annotated protein expression

Annotated protein
expression

Urothelial cells:High
 

Antibody staining

Antibody HPA023626

 

Antibody CAB073536

 

Urothelial cells

High   High  
   
   
   

URINARY BLADDER - HPA RNA-seq

Average TPM

31.3

overview Male, age 74
Sample 1
TPM: 11.6
Cell types%
Urothelial cells: 5
Smooth muscle cells: 60
Fibroblasts: 20
Endothelial cells: 10
Other cell types: 5
overview Male, age 80
Sample 2
TPM: 51.0
Cell types%
Urothelial cells: 10
Smooth muscle cells: 45
Fibroblasts: 15
Endothelial cells: 10
Other cell types: 20

URINARY BLADDER - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

RPKM

0.68.217.40.223.40246810121416182022
 
0.68.217.40.223.40246810121416182022

Bladder

Bladder
RPKM: 9.8
Samples: 11

Max RPKM: 23.4
Min RPKM: 0.2
Std RPKM: 9.1
Median RPKM: 8.2
GTEX-SNMC-0826-SM-4DM66 23.4
GTEX-SNOS-0526-SM-4DM54 22.6
GTEX-U3ZN-1226-SM-4DXUD 17.9
GTEX-S4UY-0926-SM-4AD6O 16.8
GTEX-S3XE-1226-SM-4AD4L 15.8
GTEX-S4Q7-0926-SM-4AD5D 8.2
GTEX-U4B1-1226-SM-4DXT7 2.0
GTEX-TMMY-1526-SM-4DXST 0.7
GTEX-U3ZM-0826-SM-4DXU6 0.4
GTEX-SE5C-1026-SM-4BRUG 0.3
GTEX-S32W-1126-SM-4AD5V 0.2
Show all

URINARY BLADDER - FANTOM5 CAGE

Average Tags Per Million

14.7

FANTOM5 sample id

Sample description

Tags Per Million

Bladder
Tags Per Million: 14.7
FF:10011-101C2 55,58,79 years, mixed 14.7

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