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RTN4
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:84.3RPKM
FANTOM5:697.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA023977

 

Antibody CAB005388

 

Glial cells

High   High  

Neuronal cells

Not detected   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

84.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 84.3
Samples: 117

Max RPKM: 232.9
Min RPKM: 19.1
Std RPKM: 34.4
Median RPKM: 81
GTEX-T2IS-0011-R5A-SM-32QP4 232.9
GTEX-131YS-0011-R5b-SM-5K7YB 159.0
GTEX-PVOW-0011-R5A-SM-32PL7 158.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 155.8
GTEX-12WSC-0011-R5b-SM-5CVNS 146.1
GTEX-WL46-0011-R5A-SM-3LK6V 141.8
GTEX-X585-0011-R5A-SM-46MVI 139.5
GTEX-1313W-0011-R5b-SM-5L3EP 138.0
GTEX-WZTO-0011-R5B-SM-3NMC5 130.3
GTEX-QVJO-0011-R5A-SM-2S1QM 125.6
GTEX-ZUA1-0011-R5b-SM-51MTG 125.3
GTEX-P44H-0011-R5A-SM-2XCEX 123.9
GTEX-S7SE-0011-R5A-SM-2XCDA 123.9
GTEX-13G51-0011-R5a-SM-5L3EB 120.3
GTEX-13X6J-0011-R5b-SM-5PNWT 119.4
GTEX-T6MN-0011-R5A-SM-32QPD 118.9
GTEX-Z93S-0011-R5b-SM-4RGNI 117.7
GTEX-11NV4-0011-R5a-SM-5NQ88 117.3
GTEX-139TT-0011-R5b-SM-5K7W8 117.2
GTEX-N7MS-0011-R5a-SM-2HMK8 114.7
GTEX-145LS-0011-R5a-SM-5SI65 114.1
GTEX-145MH-0011-R5a-SM-5P9JT 113.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 113.1
GTEX-WVLH-0011-R5A-SM-3MJFW 113.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 112.7
GTEX-WWYW-0011-R5A-SM-3NB3E 110.7
GTEX-13SLX-0011-R5a-SM-5O9BV 110.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 110.5
GTEX-1399T-0011-R5b-SM-5IJDK 110.4
GTEX-14ABY-0011-R5b-SM-5SI7B 110.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 108.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 104.9
GTEX-13O3O-0011-R5b-SM-5KM44 104.9
GTEX-13VXU-0011-R5a-SM-5O9D7 102.5
GTEX-12WSB-0011-R5b-SM-5GU67 102.4
GTEX-11OF3-0011-R5a-SM-57WB4 101.5
GTEX-13FXS-0011-R5b-SM-5LZYE 99.7
GTEX-14BIM-0011-R5b-SM-5S2RM 99.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 99.5
GTEX-12WSF-0011-R5a-SM-5HL8K 98.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 97.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 94.5
GTEX-12WSA-0011-R5b-SM-5GU5I 92.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 92.4
GTEX-UTHO-0011-R5A-SM-3GIJD 92.4
GTEX-R55E-0011-R5A-SM-2TC5N 92.2
GTEX-13NYS-0011-R5a-SM-5MR4D 91.6
GTEX-132Q8-0011-R5a-SM-5IJDM 91.0
GTEX-13X6I-0011-R5a-SM-5PNWW 89.4
GTEX-13OW7-0011-R5b-SM-5O9DM 89.1
GTEX-13X6K-0011-R5b-SM-5PNUE 87.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 86.9
GTEX-T5JC-0011-R5A-SM-32PLK 86.6
GTEX-12WSD-0011-R5b-SM-5CVNG 86.0
GTEX-N7MT-0011-R5a-SM-2I3G6 85.9
GTEX-13FLW-0011-R5a-SM-5LZX6 83.7
GTEX-11H98-0011-R5b-SM-57WCF 83.3
GTEX-11GSP-0011-R5a-SM-57WBE 83.0
GTEX-QMR6-0011-R5A-SM-32PKT 81.0
GTEX-13NYB-0011-R5a-SM-5MR45 80.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 79.0
GTEX-13JUV-0011-R5a-SM-5LZY5 78.9
GTEX-NL4W-0011-R5a-SM-2I3GD 78.8
GTEX-13JVG-0011-R5a-SM-5MR4O 78.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 77.3
GTEX-13FLV-0011-R5a-SM-5LZWT 76.9
GTEX-RU72-0011-R5A-SM-2TF6U 75.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 75.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 74.5
GTEX-RVPV-0011-R5A-SM-2TF69 73.8
GTEX-13OW6-0011-R5a-SM-5O9BK 73.3
GTEX-13OVL-0011-R5b-SM-5L3FU 72.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 72.6
GTEX-X4XX-0011-R5A-SM-46MWN 72.6
GTEX-13OW5-0011-R5b-SM-5L3FR 72.4
GTEX-13S7M-0011-R5b-SM-5P9HS 70.9
GTEX-YFC4-0011-R5a-SM-4RGLR 70.1
GTEX-TSE9-0011-R5A-SM-3DB7J 69.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 69.3
GTEX-NL3H-0011-R5a-SM-2I3GB 68.3
GTEX-XMD1-0011-R5A-SM-4AT47 68.3
GTEX-13CZV-0011-R5a-SM-5K7XA 68.0
GTEX-11WQC-0011-R5a-SM-5BC74 66.1
GTEX-XOTO-0011-R5A-SM-4B657 65.0
GTEX-14BIN-0011-R5b-SM-5SI78 64.5
GTEX-13OVH-0011-R5b-SM-5KM4L 63.8
GTEX-RVPU-0011-R5A-SM-2XCAD 62.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 61.5
GTEX-ZXG5-0011-R5b-SM-57WBN 61.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 58.7
GTEX-OHPN-0011-R5A-SM-2I5FF 57.5
GTEX-ZE7O-0011-R5a-SM-57WBO 57.3
GTEX-12ZZX-0011-R5a-SM-5HL89 56.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 55.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 54.7
GTEX-144GO-0011-R5a-SM-5PNUR 53.9
GTEX-ZVT3-0011-R5a-SM-51MSI 49.8
GTEX-144GL-0011-R5b-SM-5PNUJ 48.6
GTEX-OXRN-0011-R5A-SM-2I5EF 45.6
GTEX-13CIG-0011-R5b-SM-5L3F2 45.1
GTEX-X261-0011-R5A-SM-3NMB4 44.9
GTEX-13FHP-0011-R5b-SM-5LZY2 43.4
GTEX-139TS-0011-R5b-SM-5J2MZ 43.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 42.3
GTEX-ZV68-0011-R5a-SM-4YCDW 41.5
GTEX-13112-0011-R5b-SM-5DUV8 40.0
GTEX-NPJ7-0011-R5a-SM-33HBK 39.0
GTEX-1445S-0011-R5a-SM-5PNUS 38.2
GTEX-12WSH-0011-R5b-SM-5P9F3 37.7
GTEX-YJ89-0011-R5a-SM-4V6GM 36.7
GTEX-139T8-0011-R5b-SM-5J1MO 29.8
GTEX-11UD1-0011-R5b-SM-5P9FP 29.0
GTEX-13CF2-0011-R5a-SM-5LZWS 28.3
GTEX-1477Z-0011-R5b-SM-5PNUO 27.8
GTEX-S7PM-0011-R5A-SM-3NM8G 25.8
GTEX-145MG-0011-R5b-SM-5S2VU 24.1
GTEX-13NZA-0011-R5b-SM-5KM4K 19.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

697.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 697.9
FF:10164-103B2 76 years, female 716.6
FF:10379-105H1 89 years, female 679.3

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