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RTN4
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    TISSUE

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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:280.6TPM
GTEx:24.8RPKM
FANTOM5:192.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA023977

 

Antibody CAB005388

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Not detected   Medium  
   
   
   

LIVER - HPA RNA-seq

Average TPM

280.6

N/A Female, age 60
Sample 1
TPM: 289.3
overview Male, age 54
Sample 2
TPM: 198.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 335.1
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 339.0
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 270.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 285.2
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 231.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 241.3
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 263.9
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 351.7
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

24.8

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 24.8
Samples: 119

Max RPKM: 47.7
Min RPKM: 1.7
Std RPKM: 10.9
Median RPKM: 25.1
GTEX-13SLX-1226-SM-5S2Q6 47.7
GTEX-14AS3-0126-SM-5Q5F4 47.3
GTEX-ZVT3-1626-SM-5GU66 46.2
GTEX-ZYT6-0626-SM-5E45V 44.7
GTEX-Y5V5-0926-SM-4VBPZ 44.4
GTEX-13VXU-0926-SM-5IFFH 43.6
GTEX-11OF3-0726-SM-5BC4Z 43.1
GTEX-T6MN-1226-SM-3NMA5 42.7
GTEX-11NV4-1326-SM-5HL6V 42.6
GTEX-Y5LM-0426-SM-4VBRO 41.6
GTEX-12WSD-1426-SM-5GCN9 40.4
GTEX-YB5E-0326-SM-5IFHU 39.9
GTEX-13NYB-1026-SM-5IFH3 38.3
GTEX-RNOR-1426-SM-48FDJ 37.9
GTEX-13FTW-1126-SM-5J2NV 36.8
GTEX-OOBJ-0826-SM-3NB2K 35.8
GTEX-R53T-0326-SM-48FEC 35.7
GTEX-12WSM-0726-SM-5GCOW 35.5
GTEX-147JS-1126-SM-5RQIW 34.9
GTEX-1399R-1226-SM-5P9GF 34.8
GTEX-1399T-0826-SM-5IFES 34.7
GTEX-Q2AG-1126-SM-48U1P 34.7
GTEX-QV44-0326-SM-4R1KD 34.7
GTEX-13FLV-0326-SM-5N9DJ 34.4
GTEX-SJXC-1226-SM-4DM78 34.4
GTEX-131XH-0626-SM-5LZWH 34.3
GTEX-QESD-2026-SM-447BI 34.2
GTEX-11DXY-0526-SM-5EGGQ 34.0
GTEX-131YS-1626-SM-5HL6C 33.9
GTEX-12WSI-0226-SM-5GCNA 33.5
GTEX-11NUK-1226-SM-5P9GM 33.1
GTEX-11ZTS-1426-SM-5EQMM 32.7
GTEX-ZAB5-0426-SM-5CVMI 32.2
GTEX-WFON-1726-SM-4LVMQ 32.1
GTEX-14A5I-1726-SM-5QGQ5 32.0
GTEX-RTLS-1326-SM-46MUN 31.3
GTEX-14DAQ-1726-SM-5S2R2 31.0
GTEX-11EQ9-0526-SM-5A5JZ 30.6
GTEX-1269C-0626-SM-5FQSS 30.2
GTEX-13FTZ-0726-SM-5IFFY 30.1
GTEX-ZF2S-3026-SM-4WWCH 30.1
GTEX-11WQC-0726-SM-5EQMR 30.0
GTEX-ZZPU-0426-SM-5GZYH 30.0
GTEX-13OW6-2626-SM-5IFF2 29.9
GTEX-14753-1626-SM-5NQ9L 29.7
GTEX-11DXZ-0126-SM-5EGGY 29.6
GTEX-145LU-1326-SM-5LU9N 29.6
GTEX-145MF-0826-SM-5QGQA 29.2
GTEX-PX3G-0826-SM-48TZS 28.4
GTEX-1212Z-0226-SM-59HLF 26.8
GTEX-ZVP2-0626-SM-51MSO 26.7
GTEX-WZTO-0626-SM-4PQYY 26.1
GTEX-11ZUS-2526-SM-59872 25.9
GTEX-13112-1426-SM-5EGH8 25.9
GTEX-WYVS-1926-SM-4PQZ2 25.9
GTEX-YECK-1926-SM-4W21H 25.9
GTEX-UPK5-1426-SM-4JBHH 25.8
GTEX-ZVT4-0626-SM-5E45T 25.6
GTEX-QEG4-1826-SM-4R1JN 25.2
GTEX-139TS-1426-SM-5IFJD 25.1
GTEX-RN64-1826-SM-48FDV 25.0
GTEX-1497J-0726-SM-5Q5D1 24.9
GTEX-S4Z8-0526-SM-4AD4T 24.7
GTEX-13N11-0926-SM-5IJG2 24.4
GTEX-XOTO-0826-SM-4B65O 23.7
GTEX-11GSP-0626-SM-5986T 23.4
GTEX-RU72-1426-SM-46MUF 23.4
GTEX-ZF29-2026-SM-4WWB7 23.3
GTEX-U3ZN-0226-SM-3DB8D 23.1
GTEX-139TU-0826-SM-5IJFG 22.9
GTEX-11ZVC-0726-SM-5FQT9 22.7
GTEX-13QJC-0726-SM-5RQJK 22.5
GTEX-X4EO-1126-SM-4QARQ 22.5
GTEX-14E1K-0326-SM-5S2PE 21.8
GTEX-ZPU1-0826-SM-57WG2 21.7
GTEX-X261-1726-SM-4PQYT 21.2
GTEX-UPIC-0926-SM-4IHLV 21.0
GTEX-13NZB-0626-SM-5IFH6 20.8
GTEX-RM2N-1926-SM-48FCU 19.6
GTEX-ZYY3-0626-SM-5NQ6W 19.5
GTEX-P78B-1326-SM-3P611 19.2
GTEX-X4EP-1026-SM-4QAS5 19.1
GTEX-147F4-1426-SM-5LUA8 18.8
GTEX-Q734-0326-SM-48U15 18.2
GTEX-13PVR-0126-SM-5S2PY 16.7
GTEX-Z9EW-0426-SM-5CVM9 16.6
GTEX-12KS4-1326-SM-5LUB3 16.5
GTEX-ZTPG-1426-SM-51MT3 16.5
GTEX-X3Y1-2726-SM-4PQZH 16.3
GTEX-12ZZZ-1326-SM-59HKW 15.5
GTEX-13O3O-1826-SM-5IFGW 15.4
GTEX-131XE-0326-SM-5LZVO 15.3
GTEX-13N2G-0926-SM-5IFGJ 15.3
GTEX-UTHO-2426-SM-4JBHD 15.0
GTEX-ZAB4-0826-SM-5LU9D 14.3
GTEX-132NY-0926-SM-5P9G3 14.1
GTEX-TKQ2-1726-SM-4DXUP 14.1
GTEX-145MO-2326-SM-5NQ9K 13.9
GTEX-S33H-1626-SM-4AD68 13.7
GTEX-VUSG-0126-SM-4KL1X 13.7
GTEX-XBEC-1526-SM-4AT68 13.0
GTEX-RWSA-1426-SM-47JXA 12.9
GTEX-WQUQ-1926-SM-4OOSA 12.5
GTEX-REY6-1226-SM-48FDR 12.0
GTEX-13113-1326-SM-5GCOI 10.7
GTEX-12696-0826-SM-5EGGE 10.2
GTEX-13NZ9-1326-SM-5MR3V 10.1
GTEX-139YR-0226-SM-5IFEM 9.4
GTEX-YFC4-1526-SM-5IFJS 9.1
GTEX-QEL4-1226-SM-447A4 8.0
GTEX-12WSG-0626-SM-5FQTQ 7.5
GTEX-146FH-1526-SM-5NQBU 6.7
GTEX-14C38-1526-SM-5RQJ7 6.7
GTEX-YEC4-0826-SM-5P9FV 6.3
GTEX-QDVN-0826-SM-48TZ2 6.1
GTEX-S32W-1926-SM-4AD63 6.0
GTEX-144GM-1326-SM-5LU5E 4.8
GTEX-12WSL-0226-SM-5CVMJ 3.8
GTEX-X4XY-1626-SM-46MVN 1.7
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

192.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 192.5
FF:10018-101C9 64,69,70 years, mixed 192.5

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