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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:4712.3TPM
GTEx:4443.2RPKM
FANTOM5:2178.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA045549

 

Antibody HPA045579

 

Antibody CAB025138

 

Glandular cells

Medium   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

4712.3

overview Male, age 65
Sample 1
TPM: 4331.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 2231.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 6445.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 5840.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

4443.2

GTEx sample id

RPKM

656.71751.25168.05.411308.805,00010,00015,00020,00025,00030,00035,000
 
656.71751.25168.05.411308.805,00010,00015,00020,00025,00030,00035,000

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 4443.2
Samples: 88

Max RPKM: 39606.7
Min RPKM: 5.4
Std RPKM: 6591.3
Median RPKM: 1751.2
GTEX-13FTW-2026-SM-5IJE2 39606.7
GTEX-13CF3-1226-SM-5LZXN 24017.8
GTEX-ZVT2-2126-SM-5NQ93 23398.9
GTEX-ZA64-1226-SM-5HL7B 21572.2
GTEX-Y5LM-1626-SM-4VDTB 17601.3
GTEX-13RTK-0826-SM-5Q5C6 17276.6
GTEX-WFG8-1626-SM-4LVMB 14026.6
GTEX-XAJ8-0526-SM-47JYK 13353.3
GTEX-ZYFG-2026-SM-5E43Y 13299.8
GTEX-ZPIC-2326-SM-57WDW 11308.8
GTEX-139T6-1026-SM-5IJGC 10914.2
GTEX-ZVP2-1726-SM-5GU5P 10470.0
GTEX-145LT-1026-SM-5LU9O 10204.3
GTEX-139YR-2226-SM-5IFFW 9084.2
GTEX-ZTX8-0526-SM-59HLD 8731.1
GTEX-13FH7-1226-SM-5IJFK 8567.2
GTEX-13D11-0726-SM-5LZZB 8537.3
GTEX-Z9EW-0926-SM-5CVMM 7583.3
GTEX-ZP4G-1626-SM-57WGD 7186.5
GTEX-XGQ4-1326-SM-4GIDU 6886.4
GTEX-X5EB-1626-SM-4E3IV 6701.9
GTEX-XBED-1426-SM-4AT4G 5968.7
GTEX-13PL7-2626-SM-5IFH4 4901.1
GTEX-133LE-1426-SM-5IFH1 4804.3
GTEX-VJYA-0926-SM-4KL1N 4256.0
GTEX-WFJO-0926-SM-4LVM2 4211.0
GTEX-YB5E-1526-SM-5IFIE 3828.0
GTEX-XXEK-1026-SM-4BRUW 3332.7
GTEX-1399U-2126-SM-5IFEZ 3331.8
GTEX-ZYWO-1526-SM-5SIAL 3207.2
GTEX-ZQG8-2526-SM-57WEQ 3184.5
GTEX-14E6E-1626-SM-5RQI7 2944.1
GTEX-ZXES-1526-SM-5NQ95 2851.0
GTEX-14DAR-1426-SM-5RQIR 2739.7
GTEX-1399S-2026-SM-5KM4B 2253.7
GTEX-131XG-1726-SM-5LZUR 2247.0
GTEX-11P7K-1626-SM-5GU63 2222.5
GTEX-X15G-1426-SM-4PQZK 2141.6
GTEX-ZEX8-1826-SM-57WBH 2049.5
GTEX-145ME-0926-SM-5O9AR 1923.9
GTEX-11DXX-1626-SM-5H11H 1918.9
GTEX-XUZC-1426-SM-4BRV3 1874.6
GTEX-11EQ9-1326-SM-5985X 1871.0
GTEX-WFG7-1726-SM-4LVME 1774.6
GTEX-ZTPG-2626-SM-57WFX 1727.7
GTEX-WQUQ-2426-SM-4MVNW 1647.6
GTEX-1399R-2026-SM-5K7WN 1557.3
GTEX-Y3IK-1726-SM-4YCCR 1557.2
GTEX-ZLV1-1126-SM-4WWBW 1479.1
GTEX-11I78-1126-SM-5A5K5 1471.0
GTEX-131XF-1326-SM-5GCMQ 1333.1
GTEX-11P82-0826-SM-5P9GU 1242.0
GTEX-11VI4-1626-SM-5EQKO 1236.6
GTEX-1122O-1326-SM-5H11F 1214.3
GTEX-13QBU-1926-SM-5IJEW 1091.4
GTEX-ZZ64-0526-SM-5GZXM 1071.9
GTEX-11NSD-1726-SM-5N9C3 988.6
GTEX-Y9LG-1626-SM-5IFHM 986.7
GTEX-ZVZP-1826-SM-5GZXB 932.8
GTEX-13111-1426-SM-5DUW3 875.2
GTEX-YF7O-1826-SM-5IFIU 802.4
GTEX-13113-1226-SM-5EGHT 777.9
GTEX-11XUK-1426-SM-5EQMG 771.9
GTEX-ZLFU-1526-SM-4WWBT 737.2
GTEX-WH7G-1626-SM-4LVMY 700.5
GTEX-11DXZ-1326-SM-5H11X 666.8
GTEX-WRHK-1026-SM-4MVOD 626.5
GTEX-13O61-1326-SM-5KM31 600.5
GTEX-13O21-1026-SM-5IJDU 600.4
GTEX-Y114-1426-SM-4TT6W 557.2
GTEX-12BJ1-1926-SM-5HL9Z 446.9
GTEX-ZTSS-0926-SM-59865 394.0
GTEX-111CU-1326-SM-5NQ8L 374.4
GTEX-YEC4-1726-SM-4W21E 373.3
GTEX-XMK1-1826-SM-4B66F 363.7
GTEX-12WSK-1526-SM-5CVNO 286.0
GTEX-148VJ-2226-SM-5NQ9M 270.4
GTEX-VUSG-1726-SM-4KKZL 244.4
GTEX-ZPCL-1726-SM-57WEO 194.1
GTEX-111YS-1426-SM-5GID8 189.0
GTEX-UPK5-2026-SM-4JBIM 164.9
GTEX-WEY5-1526-SM-4LMJF 115.2
GTEX-ZC5H-2326-SM-4WAYT 55.3
GTEX-13OVI-1926-SM-5IJCG 48.5
GTEX-117YX-0326-SM-5GICL 24.4
GTEX-1192X-2526-SM-59868 17.4
GTEX-ZF2S-1726-SM-57WFT 12.8
GTEX-ZQUD-0926-SM-57WE3 5.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

2178.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 2178.7
FF:10024-101D6 15,40,85 years, mixed 2178.7

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The Human Protein Atlas project is funded
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