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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:58.4TPM
GTEx:9.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA027066

 

Antibody CAB000126

 

Endothelial cells

Medium   High  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

58.4

N/A Male, age 5
Sample 1
TPM: 52.0
overview Female, age 40
Sample 2
TPM: 46.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 76.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 9.5
Samples: 114

Max RPKM: 40
Min RPKM: 2.3
Std RPKM: 5.3
Median RPKM: 8.3
GTEX-13JVG-3126-SM-5L3FH 40.0
GTEX-WZTO-2926-SM-3NM9I 26.9
GTEX-X585-3026-SM-46MWF 25.7
GTEX-NPJ7-2726-SM-2I3FT 20.9
GTEX-11OC5-0726-SM-5P9JK 20.5
GTEX-ZZPT-3026-SM-5GZXH 18.1
GTEX-13JUV-2926-SM-5LZX7 17.3
GTEX-144FL-3026-SM-5O99C 16.9
GTEX-132Q8-3026-SM-5PNVG 16.7
GTEX-11WQK-3026-SM-5EQL6 16.4
GTEX-12WSD-3126-SM-5HL7P 16.2
GTEX-13NYC-2826-SM-5K7WR 15.3
GTEX-11TTK-2926-SM-5PNYP 14.8
GTEX-12126-1026-SM-5P9JJ 14.8
GTEX-1399T-3026-SM-5KLZC 14.5
GTEX-13OVJ-2826-SM-5L3GW 14.5
GTEX-NPJ8-1526-SM-2D7VU 14.3
GTEX-11PRG-2926-SM-5987A 14.2
GTEX-11ONC-2926-SM-5P9JM 14.1
GTEX-12ZZZ-3026-SM-5BC67 14.0
GTEX-13X6K-2926-SM-5Q5D5 13.8
GTEX-1445S-3026-SM-5O9BR 13.6
GTEX-139T8-1026-SM-5J2MC 13.4
GTEX-ZVT3-3026-SM-5E43N 13.2
GTEX-145LS-3126-SM-5Q5BY 12.7
GTEX-11GSP-3226-SM-5986O 12.0
GTEX-11O72-2926-SM-5BC4V 11.9
GTEX-13NYS-3126-SM-5KLYV 11.6
GTEX-13IVO-2926-SM-5L3CZ 11.5
GTEX-11DXY-3226-SM-5GIDE 11.1
GTEX-12WSA-2926-SM-5EQ4D 11.1
GTEX-117XS-3026-SM-5N9CA 10.8
GTEX-14ASI-3026-SM-5S2PN 10.8
GTEX-131YS-3126-SM-5KLYT 10.7
GTEX-WWYW-3126-SM-3NB39 10.6
GTEX-ZAK1-3026-SM-5S2MJ 10.6
GTEX-13QIC-2926-SM-5J2NF 10.5
GTEX-13PVQ-3026-SM-5SI93 10.3
GTEX-QVJO-1426-SM-2S1QY 10.3
GTEX-13OW7-3026-SM-5L3GY 10.0
GTEX-144GL-3026-SM-5Q5CW 9.8
GTEX-11EMC-3226-SM-5EGKW 9.7
GTEX-PWO3-0926-SM-2I5EY 9.7
GTEX-11NV4-2126-SM-5N9DS 9.6
GTEX-13X6J-3026-SM-5Q5CU 9.6
GTEX-11EI6-3026-SM-5GZZO 9.5
GTEX-13S7M-3126-SM-5RQJQ 9.4
GTEX-R55F-1326-SM-5S2V4 9.4
GTEX-131XW-3126-SM-5LZUC 9.1
GTEX-145MH-3026-SM-5Q5DZ 8.9
GTEX-ZE7O-3126-SM-5HL5X 8.9
GTEX-WHSE-3026-SM-3P5ZH 8.8
GTEX-13VXU-2926-SM-5LU5C 8.7
GTEX-11NUK-2926-SM-5A5MD 8.5
GTEX-13PL6-3126-SM-5LUAR 8.5
GTEX-1192X-3126-SM-5N9BY 8.4
GTEX-14BMV-3026-SM-5S2PQ 8.4
GTEX-12WSC-3026-SM-5GCNF 8.1
GTEX-RU72-3026-SM-5SI7Y 8.1
GTEX-Y8DK-0826-SM-4TT3T 8.1
GTEX-QVUS-2826-SM-3GADB 8.0
GTEX-Y111-2726-SM-4TT3N 7.6
GTEX-ZYFD-3026-SM-5E44C 7.6
GTEX-13SLX-3126-SM-5S2Q5 7.3
GTEX-QMR6-1426-SM-32PLA 7.2
GTEX-XLM4-3026-SM-4AT6L 7.2
GTEX-OXRN-2426-SM-2I5EQ 7.1
GTEX-ZAJG-3126-SM-5HL9J 7.1
GTEX-N7MT-1126-SM-5SI7V 7.0
GTEX-ZUA1-3026-SM-59HJC 6.9
GTEX-11GSO-2926-SM-5HL73 6.8
GTEX-12ZZY-3026-SM-5GCOU 6.7
GTEX-145MG-3026-SM-5RQJA 6.6
GTEX-13O3O-3126-SM-5KM3H 6.5
GTEX-13FXS-3126-SM-5J2NN 6.4
GTEX-1128S-2726-SM-5H12C 6.3
GTEX-13FLW-1426-SM-5K7YE 6.2
GTEX-13NYB-3026-SM-5IJD7 6.2
GTEX-11ZUS-2926-SM-5FQSL 6.1
GTEX-PVOW-2526-SM-2XCF7 6.1
GTEX-T6MN-2626-SM-32PMQ 6.1
GTEX-13FHP-3026-SM-5IJBS 6.0
GTEX-13O3Q-2926-SM-5KM45 6.0
GTEX-14A5I-2926-SM-5Q5CQ 6.0
GTEX-RNOR-2326-SM-2TF4I 6.0
GTEX-YFC4-3126-SM-5PNV6 6.0
GTEX-13FHO-3026-SM-5J1O9 5.8
GTEX-13OW8-2826-SM-5L3GC 5.8
GTEX-Q2AG-2926-SM-2HMJ3 5.8
GTEX-WVLH-3026-SM-3MJG9 5.8
GTEX-12WSH-3026-SM-5CVNI 5.7
GTEX-1313W-3126-SM-5LZUI 5.7
GTEX-11DXW-1126-SM-5H12Q 5.6
GTEX-11GS4-3126-SM-5A5LH 5.6
GTEX-T2IS-3026-SM-32QPM 5.6
GTEX-WL46-2926-SM-3LK82 5.5
GTEX-13OW6-3026-SM-5J2MI 5.3
GTEX-XOTO-3026-SM-4B65M 5.3
GTEX-Z93S-2926-SM-57WB9 5.3
GTEX-12ZZX-2926-SM-5GCOQ 5.2
GTEX-111FC-3126-SM-5GZZ2 5.0
GTEX-QDT8-2926-SM-32PKC 4.9
GTEX-X4XX-3026-SM-3NMB2 4.9
GTEX-T5JC-2426-SM-3NMDB 4.7
GTEX-UTHO-3026-SM-3GAFB 4.5
GTEX-12ZZW-2926-SM-5LZUP 4.3
GTEX-145MF-2726-SM-5O995 4.3
GTEX-13OVH-3026-SM-5MR4N 3.9
GTEX-13G51-3026-SM-5IJB8 3.8
GTEX-YJ89-3026-SM-5IFJI 3.8
GTEX-147GR-3026-SM-5S2ML 3.5
GTEX-TSE9-3026-SM-3DB76 3.4
GTEX-1117F-3226-SM-5N9CT 3.0
GTEX-11OF3-2926-SM-5HL78 2.3
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.0
Samples: 108

Max RPKM: 51.4
Min RPKM: 2.4
Std RPKM: 6.7
Median RPKM: 8
GTEX-11ZUS-0011-R10b-SM-5BC79 51.4
GTEX-X261-0011-R10B-SM-4E3JT 36.2
GTEX-XMD1-0011-R10A-SM-4AT4A 27.5
GTEX-NL4W-0011-R10A-SM-2I3DY 26.7
GTEX-QVUS-0011-R10A-SM-3GIK3 23.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 20.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 19.1
GTEX-X4EP-0011-R10B-SM-4QASJ 19.0
GTEX-13N2G-0011-R10a-SM-5MR34 17.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 17.3
GTEX-1445S-0011-R10a-SM-5PNWB 17.0
GTEX-XLM4-0011-R10A-SM-4AT5P 16.9
GTEX-X585-0011-R10A-SM-46MUY 16.8
GTEX-131YS-0011-R10b-SM-5EQ5N 16.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 15.5
GTEX-12WSA-0011-R10b-SM-5P9ET 15.4
GTEX-ZV68-0011-R10a-SM-51MT7 15.4
GTEX-13NZA-0011-R10b-SM-5KM54 14.1
GTEX-T5JC-0011-R10A-SM-32PM2 14.1
GTEX-13X6I-0011-R10a-SM-5PNWI 14.0
GTEX-ZUA1-0011-R10a-SM-51MT6 13.8
GTEX-N7MT-0011-R10A-SM-2I3E1 12.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 12.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 12.1
GTEX-11WQK-0011-R10a-SM-5BC6R 11.8
GTEX-13JUV-0011-R10b-SM-5LZXR 11.7
GTEX-13QJC-0011-R10a-SM-5SI63 11.7
GTEX-WZTO-0011-R10B-SM-4E3KB 11.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 11.5
GTEX-14753-0011-R10b-SM-5S2WE 11.4
GTEX-13NYB-0011-R10a-SM-5KM43 11.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 10.8
GTEX-147F4-0011-R10b-SM-5S2WC 10.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 10.3
GTEX-14BIL-0011-R10a-SM-5SI75 10.1
GTEX-13G51-0011-R10b-SM-5LZYF 10.0
GTEX-13OW8-0011-R10a-SM-5L3H6 10.0
GTEX-13SLW-0011-R10a-SM-5S2UI 10.0
GTEX-QMR6-0011-R10A-SM-32PKO 10.0
GTEX-12126-0011-R10b-SM-5BC6T 9.8
GTEX-ZVT3-0011-R10b-SM-57WB6 9.8
GTEX-N7MS-0011-R10A-SM-2HMJK 9.6
GTEX-13FHO-0011-R10b-SM-5J2MM 9.5
GTEX-WWYW-0011-R10A-SM-3NB35 9.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 9.4
GTEX-13OVL-0011-R10a-SM-5L3GS 9.3
GTEX-13QIC-0011-R10a-SM-5O9C7 8.7
GTEX-145LU-0011-R10a-SM-5PNWJ 8.7
GTEX-WL46-0011-R10A-SM-3MJFQ 8.6
GTEX-131XW-0011-R10a-SM-5DUVA 8.4
GTEX-P44H-0011-R10A-SM-2XCEK 8.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 8.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 8.2
GTEX-S7SE-0011-R10A-SM-2XCDF 8.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 7.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.8
GTEX-OXRN-0011-R10A-SM-2I5GC 7.8
GTEX-13JVG-0011-R10b-SM-5KM2P 7.7
GTEX-WVLH-0011-R10A-SM-3MJFM 7.7
GTEX-13IVO-0011-R10a-SM-5LZY3 7.6
GTEX-13X6K-0011-R10a-SM-5P9JR 7.6
GTEX-11WQC-0011-R10a-SM-57WCT 7.5
GTEX-13NYS-0011-R10a-SM-5MR4S 7.5
GTEX-T6MN-0011-R10A-SM-32QP7 7.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 7.4
GTEX-1313W-0011-R10b-SM-5DUXA 7.3
GTEX-1477Z-0011-R10b-SM-5S2RF 7.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 7.2
GTEX-RVPU-0011-R10A-SM-2XCAH 7.0
GTEX-145LS-0011-R10a-SM-5PNUQ 6.9
GTEX-147GR-0011-R10b-SM-5S2UM 6.7
GTEX-12WSC-0011-R10a-SM-5GU57 6.6
GTEX-13SLX-0011-R10a-SM-5P9HV 6.6
GTEX-12WSF-0011-R10a-SM-5LZVH 6.5
GTEX-13FLW-0011-R10b-SM-5LZZF 6.5
GTEX-13OW6-0011-R10a-SM-5L3HE 6.5
GTEX-ZXG5-0011-R10a-SM-57WDD 6.4
GTEX-145MH-0011-R10b-SM-5PNUK 6.3
GTEX-13S7M-0011-R10b-SM-5PNZB 6.2
GTEX-OXRO-0011-R10A-SM-2I5EH 6.2
GTEX-X4XX-0011-R10B-SM-46MWO 6.2
GTEX-YFC4-0011-R10a-SM-4SOK5 6.2
GTEX-11H98-0011-R10b-SM-5NQ98 6.1
GTEX-13FXS-0011-R10a-SM-5J2MA 6.1
GTEX-Z93S-0011-R10a-SM-4RGNM 6.0
GTEX-QDT8-0011-R10A-SM-32PKG 5.9
GTEX-145MG-0011-R10a-SM-5PNWG 5.8
GTEX-131XH-0011-R10a-SM-5EGLJ 5.7
GTEX-13O3O-0011-R10a-SM-5LUA9 5.6
GTEX-13OW7-0011-R10a-SM-5L3H3 5.6
GTEX-13O3Q-0011-R10b-SM-5KM39 5.2
GTEX-ZF28-0011-R10a-SM-4WWEH 5.2
GTEX-NL3H-0011-R10A-SM-2I3E9 5.1
GTEX-12WSH-0011-R10a-SM-5LZUS 5.0
GTEX-12WSE-0011-R10b-SM-5P9JV 4.9
GTEX-YJ89-0011-R10a-SM-4SOK9 4.9
GTEX-TSE9-0011-R10A-SM-3DB7O 4.8
GTEX-13X6J-0011-R10b-SM-5PNWA 4.6
GTEX-14BIN-0011-R10a-SM-5S2UA 4.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 4.5
GTEX-13N1W-0011-R10b-SM-5MR4H 4.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 4.1
GTEX-12WSM-0011-R10a-SM-5DUWV 4.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 3.9
GTEX-13CZV-0011-R10b-SM-5LZYD 3.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 3.0
GTEX-12WSD-0011-R10b-SM-5GU79 2.4
GTEX-139TS-0011-R10a-SM-5K7TU 2.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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