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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:896.9TPM
GTEx:156.5RPKM
FANTOM5:1168.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Low
 

Antibody staining

Antibody HPA027066

 

Antibody CAB000126

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Low   Medium  
   
   
   

LIVER - HPA RNA-seq

Average TPM

896.9

N/A Female, age 60
Sample 1
TPM: 750.4
overview Male, age 54
Sample 2
TPM: 1266.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 1045.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 686.1
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 678.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 1045.7
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 949.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 623.0
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 826.7
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 1096.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

156.5

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 156.5
Samples: 119

Max RPKM: 376.7
Min RPKM: 37.4
Std RPKM: 63.3
Median RPKM: 146.8
GTEX-U3ZN-0226-SM-3DB8D 376.7
GTEX-Z9EW-0426-SM-5CVM9 328.7
GTEX-1399R-1226-SM-5P9GF 326.5
GTEX-ZF2S-3026-SM-4WWCH 306.6
GTEX-TKQ2-1726-SM-4DXUP 299.0
GTEX-11DXZ-0126-SM-5EGGY 293.7
GTEX-QESD-2026-SM-447BI 291.7
GTEX-ZZPU-0426-SM-5GZYH 271.1
GTEX-R53T-0326-SM-48FEC 256.1
GTEX-1399T-0826-SM-5IFES 253.0
GTEX-145MF-0826-SM-5QGQA 248.0
GTEX-YB5E-0326-SM-5IFHU 235.6
GTEX-WFON-1726-SM-4LVMQ 230.8
GTEX-S4Z8-0526-SM-4AD4T 230.1
GTEX-ZAB5-0426-SM-5CVMI 225.6
GTEX-QEG4-1826-SM-4R1JN 223.8
GTEX-12WSI-0226-SM-5GCNA 221.3
GTEX-ZYT6-0626-SM-5E45V 217.2
GTEX-13FTW-1126-SM-5J2NV 216.1
GTEX-T6MN-1226-SM-3NMA5 215.8
GTEX-Q734-0326-SM-48U15 209.7
GTEX-11EQ9-0526-SM-5A5JZ 202.8
GTEX-13FTZ-0726-SM-5IFFY 201.5
GTEX-QV44-0326-SM-4R1KD 200.0
GTEX-13VXU-0926-SM-5IFFH 193.6
GTEX-1497J-0726-SM-5Q5D1 193.5
GTEX-P78B-1326-SM-3P611 192.3
GTEX-14DAQ-1726-SM-5S2R2 191.9
GTEX-14E1K-0326-SM-5S2PE 191.0
GTEX-Y5LM-0426-SM-4VBRO 190.9
GTEX-12WSD-1426-SM-5GCN9 190.4
GTEX-X3Y1-2726-SM-4PQZH 188.3
GTEX-ZPU1-0826-SM-57WG2 187.7
GTEX-13112-1426-SM-5EGH8 185.9
GTEX-RWSA-1426-SM-47JXA 183.5
GTEX-147JS-1126-SM-5RQIW 183.3
GTEX-13OW6-2626-SM-5IFF2 183.0
GTEX-14AS3-0126-SM-5Q5F4 182.8
GTEX-11OF3-0726-SM-5BC4Z 182.7
GTEX-YEC4-0826-SM-5P9FV 178.1
GTEX-VUSG-0126-SM-4KL1X 177.4
GTEX-QEL4-1226-SM-447A4 177.2
GTEX-11ZTS-1426-SM-5EQMM 175.9
GTEX-144GM-1326-SM-5LU5E 170.8
GTEX-PX3G-0826-SM-48TZS 169.2
GTEX-ZF29-2026-SM-4WWB7 168.7
GTEX-ZAB4-0826-SM-5LU9D 163.0
GTEX-WYVS-1926-SM-4PQZ2 162.2
GTEX-SJXC-1226-SM-4DM78 161.4
GTEX-11NV4-1326-SM-5HL6V 161.2
GTEX-11NUK-1226-SM-5P9GM 160.5
GTEX-131YS-1626-SM-5HL6C 158.5
GTEX-UPIC-0926-SM-4IHLV 156.7
GTEX-RM2N-1926-SM-48FCU 155.9
GTEX-YECK-1926-SM-4W21H 154.7
GTEX-UPK5-1426-SM-4JBHH 154.6
GTEX-11WQC-0726-SM-5EQMR 150.0
GTEX-1212Z-0226-SM-59HLF 148.2
GTEX-X261-1726-SM-4PQYT 147.2
GTEX-145LU-1326-SM-5LU9N 146.8
GTEX-RN64-1826-SM-48FDV 142.7
GTEX-Y5V5-0926-SM-4VBPZ 142.6
GTEX-WZTO-0626-SM-4PQYY 140.6
GTEX-XOTO-0826-SM-4B65O 140.2
GTEX-RTLS-1326-SM-46MUN 139.2
GTEX-11DXY-0526-SM-5EGGQ 138.2
GTEX-12KS4-1326-SM-5LUB3 138.1
GTEX-REY6-1226-SM-48FDR 137.2
GTEX-147F4-1426-SM-5LUA8 136.0
GTEX-OOBJ-0826-SM-3NB2K 133.9
GTEX-13113-1326-SM-5GCOI 133.4
GTEX-ZVT3-1626-SM-5GU66 132.0
GTEX-ZVT4-0626-SM-5E45T 132.0
GTEX-13SLX-1226-SM-5S2Q6 131.6
GTEX-13NZ9-1326-SM-5MR3V 130.9
GTEX-ZTPG-1426-SM-51MT3 127.8
GTEX-13NYB-1026-SM-5IFH3 127.7
GTEX-RNOR-1426-SM-48FDJ 125.0
GTEX-13PVR-0126-SM-5S2PY 124.3
GTEX-Q2AG-1126-SM-48U1P 121.9
GTEX-S33H-1626-SM-4AD68 119.2
GTEX-ZYY3-0626-SM-5NQ6W 118.5
GTEX-13FLV-0326-SM-5N9DJ 118.0
GTEX-UTHO-2426-SM-4JBHD 117.5
GTEX-12WSL-0226-SM-5CVMJ 116.7
GTEX-12WSM-0726-SM-5GCOW 116.7
GTEX-11ZUS-2526-SM-59872 116.6
GTEX-ZVP2-0626-SM-51MSO 115.0
GTEX-139TS-1426-SM-5IFJD 114.2
GTEX-132NY-0926-SM-5P9G3 114.1
GTEX-12WSG-0626-SM-5FQTQ 111.9
GTEX-11GSP-0626-SM-5986T 109.4
GTEX-13N2G-0926-SM-5IFGJ 107.9
GTEX-131XH-0626-SM-5LZWH 107.6
GTEX-11ZVC-0726-SM-5FQT9 105.8
GTEX-139TU-0826-SM-5IJFG 103.0
GTEX-X4EO-1126-SM-4QARQ 95.9
GTEX-XBEC-1526-SM-4AT68 95.8
GTEX-RU72-1426-SM-46MUF 93.9
GTEX-14753-1626-SM-5NQ9L 92.7
GTEX-YFC4-1526-SM-5IFJS 92.4
GTEX-QDVN-0826-SM-48TZ2 90.8
GTEX-X4XY-1626-SM-46MVN 89.4
GTEX-14A5I-1726-SM-5QGQ5 85.4
GTEX-13QJC-0726-SM-5RQJK 85.2
GTEX-13O3O-1826-SM-5IFGW 84.3
GTEX-13NZB-0626-SM-5IFH6 83.2
GTEX-X4EP-1026-SM-4QAS5 79.6
GTEX-131XE-0326-SM-5LZVO 79.4
GTEX-14C38-1526-SM-5RQJ7 79.3
GTEX-146FH-1526-SM-5NQBU 78.1
GTEX-13N11-0926-SM-5IJG2 77.3
GTEX-S32W-1926-SM-4AD63 76.2
GTEX-WQUQ-1926-SM-4OOSA 75.1
GTEX-139YR-0226-SM-5IFEM 71.9
GTEX-1269C-0626-SM-5FQSS 69.7
GTEX-12ZZZ-1326-SM-59HKW 65.6
GTEX-12696-0826-SM-5EGGE 55.5
GTEX-145MO-2326-SM-5NQ9K 37.4
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

1168.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 1168.1
FF:10018-101C9 64,69,70 years, mixed 1168.1

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