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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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GNLY
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    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

GNLY

Gene description

Granulysin

Protein class

Predicted intracellular proteins
Predicted secreted proteins
Transporters

Predicted localization

Intracellular,Secreted

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enhanced (bone marrow, spleen, endometrium)
GTEx:Group enriched (spleen, lung)
FANTOM5:Tissue enhanced (placenta, endometrium)

Protein evidence

Evidence at protein level

Protein expression

Selective expression in a subset of immune cells.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA058021 , CAB025186
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Endometrium

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (bone marrow, spleen, endometrium)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (spleen, lung)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (placenta, endometrium)

GENE INFORMATION

Gene name

GNLY (HGNC Symbol)

Synonyms

D2S69E, LAG-2, LAG2, NKG5, TLA519

Description

Granulysin (HGNC Symbol)

Entrez gene summary

The product of this gene is a member of the saposin-like protein (SAPLIP) family and is located in the cytotoxic granules of T cells, which are released upon antigen stimulation. This protein is present in cytotoxic granules of cytotoxic T lymphocytes and natural killer cells, and it has antimicrobial activity against M. tuberculosis and other organisms. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

Chromosome

2

Cytoband

p11.2

Chromosome location (bp)

85685175 - 85698854

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000115523 (version 83.38)

Entrez gene

10578

UniProt

P22749 (UniProt - Evidence at protein level)

neXtProt

NX_P22749

Antibodypedia

GNLY antibodies

PROTEIN BROWSER

GNLY-001
GNLY-008
GNLY-010
GNLY-014

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GNLY-001
ENSP00000263863
ENST00000263863
P22749 [Direct mapping]
Granulysin
Show all
Transporters
   Transporter channels and pores
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005615 [extracellular space]
GO:0006968 [cellular defense response]
GO:0031640 [killing of cells of other organism]
GO:0042742 [defense response to bacterium]
GO:0050832 [defense response to fungus]
Show all
145 aa
16.4 kDa
Yes 0
GNLY-008
ENSP00000387116
ENST00000409696
P22749 [Direct mapping]
Granulysin
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005615 [extracellular space]
GO:0006968 [cellular defense response]
GO:0031640 [killing of cells of other organism]
GO:0042742 [defense response to bacterium]
GO:0050832 [defense response to fungus]
Show all
130 aa
14.9 kDa
No 0
GNLY-010
ENSP00000436423
ENST00000524600
B4E3H9 [Direct mapping]
Granulysin; cDNA FLJ51776, highly similar to Granulysin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
172 aa
19.3 kDa
Yes 0
GNLY-014
ENSP00000434467
ENST00000526018
H0YDW8 [Direct mapping]
Granulysin
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
187 aa
20.8 kDa
No 0

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The Human Protein Atlas project is funded
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