Expression of FAM20B in cancer - Summary

CANCER ATLAS

Gene description

Family with sequence similarity 20, member B

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA007409

GENE INFORMATION
Gene name	FAM20B (HGNC Symbol)
Synonyms	GXK1, KIAA0475
Description	Family with sequence similarity 20, member B (HGNC Symbol)
Entrez gene summary
Chromosome	1
Cytoband	q25.2
Chromosome location (bp)	179025804 - 179076562
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000116199 (version 83.38)
Entrez gene	9917
UniProt	O75063 (UniProt - Evidence at protein level)
neXtProt	NX_O75063
Antibodypedia	FAM20B antibodies

PROTEIN BROWSER

FAM20B-001	FAM20B-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM20B-001 ENSP00000263733 ENST00000263733	O75063 [Direct mapping] Glycosaminoglycan xylosylkinase A0A024R918 [Target identity:100%; Query identity:100%] Family with sequence similarity 20, member B, isoform CRA_a Show all	MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Phobius predicted secreted proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000139 [Golgi membrane] GO:0005524 [ATP binding] GO:0005654 [nucleoplasm] GO:0005794 [Golgi apparatus] GO:0016021 [integral component of membrane] GO:0016301 [kinase activity] GO:0016310 [phosphorylation] GO:0016773 [phosphotransferase activity, alcohol group as acceptor] GO:0046872 [metal ion binding] GO:1903955 [positive regulation of protein targeting to mitochondrion] Show all	409 aa 46.4 kDa	No	0
FAM20B-002 ENSP00000404005 ENST00000440702	X6RH03 [Direct mapping] Glycosaminoglycan xylosylkinase Show all	MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Phobius predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		138 aa 15.8 kDa	No	0