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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.3TPM
GTEx:10.8RPKM
FANTOM5:29.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
 

Antibody staining

Antibody HPA069520

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA069520

  

Adipocytes

 Medium  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

41.3
N/A Female, age 80
Sample 1
TPM: 34.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 35.0
N/A Female, age 57
Sample 3
TPM: 29.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 40.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 67.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

10.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.9
Samples: 350

Max RPKM: 23.7
Min RPKM: 4.5
Std RPKM: 2.7
Median RPKM: 10.7
GTEX-R55F-1426-SM-2TF53 23.7
GTEX-WFON-2226-SM-3TW8W 19.3
GTEX-XBEC-0326-SM-4AT4M 19.1
GTEX-1314G-1626-SM-5EQ67 18.2
GTEX-1211K-2226-SM-5FQU6 17.8
GTEX-Y8E4-0726-SM-4WWFN 17.2
GTEX-145MN-2626-SM-5NQAH 17.1
GTEX-XV7Q-2626-SM-4BRVA 17.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 10.7
Samples: 227

Max RPKM: 23.6
Min RPKM: 4.5
Std RPKM: 3.2
Median RPKM: 10.4
GTEX-ZT9X-0926-SM-5O9C4 23.6
GTEX-ZC5H-1626-SM-5HL7L 22.9
GTEX-14DAQ-2526-SM-5RQIO 19.1
GTEX-13X6I-1526-SM-5SIAC 18.9
GTEX-ZE9C-1326-SM-5S2OW 17.6
GTEX-XBEC-1826-SM-4QASN 17.0
GTEX-1212Z-0526-SM-5FQSQ 16.7
GTEX-ZAB5-1126-SM-5Q5AD 16.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

29.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 29.3
FF:10010-101C1 65,65,76 years, mixed 29.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.