We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RRAGC
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.2TPM
GTEx:11.6RPKM
FANTOM5:20.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA018247

 

Adipocytes

Medium  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 
 

BREAST - HPA RNA-seq

Average TPM

22.2

overview Female, age 52
Sample 1
TPM: 18.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 32.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 20.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 16.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 11.6
Samples: 214

Max RPKM: 29
Min RPKM: 5.6
Std RPKM: 4.2
Median RPKM: 10.6
GTEX-11TUW-1826-SM-5BC5D 29.0
GTEX-TKQ2-1826-SM-33HB2 26.7
GTEX-XMK1-1126-SM-4IHJ8 24.1
GTEX-X4XY-0926-SM-4E3JD 23.5
GTEX-144GM-0926-SM-5O994 23.1
GTEX-RUSQ-2026-SM-4GIAK 21.9
GTEX-QMRM-1626-SM-4R1KV 21.6
GTEX-Y8E4-1626-SM-5S2MW 21.0
GTEX-TKQ1-0226-SM-33HB5 20.9
GTEX-UTHO-1026-SM-3GAF7 20.8
GTEX-XGQ4-0926-SM-4AT4U 20.6
GTEX-145ME-1526-SM-5Q5F2 20.1
GTEX-ZT9W-2026-SM-51MRA 19.6
GTEX-11DXZ-1926-SM-5GZZL 19.5
GTEX-ZDXO-0126-SM-5S2ND 19.4
GTEX-ZDYS-1126-SM-5K7UB 19.1
GTEX-R53T-1526-SM-48FEK 18.9
GTEX-ZZ64-1226-SM-5E43R 18.5
GTEX-13CF3-2126-SM-5IFJP 18.2
GTEX-13W46-0826-SM-5LU3H 18.1
GTEX-REY6-2426-SM-48FF5 18.0
GTEX-PSDG-1626-SM-48TCQ 17.7
GTEX-ZPIC-1126-SM-5BC7F 17.3
GTEX-S33H-0326-SM-4AD6N 17.1
GTEX-11WQK-2426-SM-5GU5C 16.7
GTEX-Y114-2026-SM-4TT7L 16.7
GTEX-W5X1-2326-SM-3GIL6 16.5
GTEX-12KS4-0126-SM-5Q5A5 16.3
GTEX-SE5C-2126-SM-4BRUJ 16.1
GTEX-11ZTT-2326-SM-5EQLG 15.9
GTEX-VJWN-0726-SM-3GIJ8 15.9
GTEX-WFON-1826-SM-3GILG 15.9
GTEX-ZAB4-2526-SM-5HL8M 15.9
GTEX-117YX-1426-SM-5H12H 15.8
GTEX-YB5K-1626-SM-5IFIN 15.8
GTEX-1313W-0826-SM-5EQ4T 15.6
GTEX-XYKS-1326-SM-4BRUN 15.3
GTEX-13O61-1826-SM-5KM4I 15.2
GTEX-11P82-1326-SM-5HL62 15.1
GTEX-13FTW-1426-SM-5LZWZ 15.1
GTEX-13N1W-0626-SM-5MR4U 15.1
GTEX-ZV6S-1826-SM-5NQ8D 15.1
GTEX-11ONC-2126-SM-5HL6E 15.0
GTEX-YEC3-1026-SM-5IFI5 14.9
GTEX-11I78-2226-SM-5PNYA 14.8
GTEX-ZQUD-1926-SM-51MSA 14.8
GTEX-11NSD-0926-SM-5N9DR 14.7
GTEX-WY7C-2726-SM-3NB3P 14.4
GTEX-14E6E-1326-SM-5S2NR 14.3
GTEX-U8XE-0826-SM-4E3J1 14.3
GTEX-13S86-1226-SM-5S2OA 14.2
GTEX-12BJ1-1826-SM-5HL9N 14.1
GTEX-13FTX-1126-SM-5N9EN 14.1
GTEX-11ZUS-0826-SM-5FQUY 13.6
GTEX-X261-0626-SM-3NMD9 13.6
GTEX-13O3Q-2226-SM-5KM4O 13.4
GTEX-117XS-1926-SM-5GICO 13.3
GTEX-U412-1826-SM-4DXTJ 13.3
GTEX-11EQ9-1826-SM-5Q5AJ 13.2
GTEX-ZQG8-0726-SM-5P9H9 13.1
GTEX-144GL-2026-SM-5LU3O 12.9
GTEX-TMMY-0726-SM-33HBE 12.9
GTEX-Y5V5-2126-SM-4WWFO 12.9
GTEX-U3ZN-1926-SM-4DXSG 12.8
GTEX-139T6-1626-SM-5PNYZ 12.7
GTEX-T6MO-0326-SM-32QOK 12.7
GTEX-13PVQ-1026-SM-5KM3M 12.6
GTEX-ZYT6-0126-SM-5E45J 12.6
GTEX-12WSK-2226-SM-5GCO5 12.4
GTEX-Y5LM-1726-SM-4VDSX 12.3
GTEX-YB5E-1726-SM-5IFJ3 12.3
GTEX-YFCO-1826-SM-4W1YH 12.3
GTEX-ZLFU-2126-SM-4WWEV 12.2
GTEX-S32W-2026-SM-4AD6E 12.1
GTEX-ZYFC-0826-SM-5E44K 12.1
GTEX-12WSM-1726-SM-5BC6J 12.0
GTEX-TML8-1226-SM-32QON 12.0
GTEX-XMD2-0926-SM-4WWEF 12.0
GTEX-1211K-1926-SM-5EQLB 11.9
GTEX-XQ8I-2426-SM-4WAXY 11.9
GTEX-146FH-0826-SM-5SI8T 11.8
GTEX-132NY-0826-SM-5K7Y7 11.7
GTEX-14753-2426-SM-5LU8U 11.6
GTEX-R55D-0826-SM-48FEA 11.6
GTEX-ZVT4-1026-SM-57WC4 11.6
GTEX-11P81-1926-SM-5BC53 11.5
GTEX-XOT4-0726-SM-4GIAW 11.4
GTEX-Y9LG-1426-SM-5IFJZ 11.4
GTEX-ZDTT-2126-SM-5S2OJ 11.4
GTEX-11NV4-2026-SM-5N9DG 11.2
GTEX-S4Q7-1126-SM-4AD6R 11.2
GTEX-T2IS-1526-SM-32QPR 11.2
GTEX-XQ3S-1326-SM-4BOPQ 11.2
GTEX-11OF3-1926-SM-59889 11.1
GTEX-ZYWO-2326-SM-5GZY4 11.1
GTEX-WYVS-1726-SM-3NMAY 11.0
GTEX-XUW1-2326-SM-4BOO5 10.9
GTEX-XV7Q-2326-SM-4BRVZ 10.9
GTEX-ZA64-1526-SM-5CVMD 10.9
GTEX-ZUA1-1526-SM-59HLS 10.9
GTEX-13NZ8-0126-SM-5IJCT 10.8
GTEX-YJ8O-2226-SM-5IFHW 10.8
GTEX-ZVZQ-0826-SM-51MRF 10.7
GTEX-1192X-2326-SM-5987X 10.6
GTEX-R3RS-0626-SM-48FE1 10.6
GTEX-Y3I4-1526-SM-4TT7K 10.6
GTEX-ZV7C-1826-SM-5NQ83 10.6
GTEX-1314G-1226-SM-5BC6D 10.5
GTEX-132AR-0826-SM-5EGK6 10.5
GTEX-139TU-0626-SM-5KM3X 10.5
GTEX-WI4N-1426-SM-3LK7H 10.4
GTEX-Y5V6-2126-SM-4WWFX 10.4
GTEX-13D11-1026-SM-5IJFB 10.3
GTEX-13NZ9-1026-SM-5MR5K 10.3
GTEX-S7SE-0826-SM-4AT4D 10.3
GTEX-1122O-1226-SM-5H113 10.1
GTEX-WOFL-0826-SM-3MJG1 10.1
GTEX-12WSN-1326-SM-5GCNT 10.0
GTEX-1117F-2826-SM-5GZXL 9.8
GTEX-T2YK-2226-SM-32QPT 9.8
GTEX-1399U-1826-SM-5PNZ1 9.7
GTEX-ZY6K-1626-SM-5GZWV 9.7
GTEX-147F4-2826-SM-5NQBN 9.6
GTEX-S4P3-1326-SM-4AD6V 9.6
GTEX-XBED-1626-SM-47JYN 9.6
GTEX-13N11-1726-SM-5J1OJ 9.5
GTEX-S4UY-0726-SM-4AD6X 9.5
GTEX-11EI6-0626-SM-5985T 9.4
GTEX-11GSO-1926-SM-5A5K3 9.4
GTEX-11WQC-1726-SM-5GU4W 9.4
GTEX-T6MN-0726-SM-32PML 9.4
GTEX-ZVE2-1226-SM-5NQ8R 9.4
GTEX-11DXY-2326-SM-5GICW 9.3
GTEX-QEL4-2126-SM-447AE 9.3
GTEX-QDT8-0626-SM-48TYW 9.2
GTEX-U3ZH-1426-SM-4DXSR 9.2
GTEX-WXYG-2226-SM-4E3IM 9.2
GTEX-Y8LW-1626-SM-5IFHX 9.2
GTEX-ZVTK-0326-SM-51MRR 9.2
GTEX-13CF2-2026-SM-5K7VI 9.1
GTEX-13QIC-2326-SM-5LU5N 9.1
GTEX-T5JC-2126-SM-32PMO 9.1
GTEX-X15G-1626-SM-3NMB3 9.1
GTEX-13OW8-0226-SM-5K7UP 9.0
GTEX-ZF2S-2026-SM-5E461 9.0
GTEX-ZWKS-2826-SM-5NQ74 9.0
GTEX-11PRG-0826-SM-5EQ6A 8.9
GTEX-13113-1726-SM-5GCOO 8.9
GTEX-Q2AG-0326-SM-48U1O 8.9
GTEX-QVJO-1826-SM-447C9 8.9
GTEX-ZU9S-1926-SM-5NQBP 8.9
GTEX-ZZPU-0626-SM-5E43T 8.9
GTEX-11DZ1-0326-SM-5N9BN 8.8
GTEX-11LCK-2426-SM-5HL5F 8.8
GTEX-11O72-2126-SM-5N9FO 8.7
GTEX-133LE-1726-SM-5K7VQ 8.7
GTEX-145MN-1926-SM-5SIAI 8.7
GTEX-RWS6-1926-SM-47JXY 8.7
GTEX-UPK5-2326-SM-3P5Z8 8.7
GTEX-VUSG-2226-SM-4KKZO 8.7
GTEX-WRHU-0326-SM-3MJFY 8.7
GTEX-ZF3C-2326-SM-5S2MZ 8.7
GTEX-WYJK-1326-SM-3NB2T 8.6
GTEX-X4EP-2926-SM-3P5YQ 8.6
GTEX-ZYW4-0826-SM-5GIDG 8.5
GTEX-13O3O-0826-SM-5K7WE 8.4
GTEX-13PL6-2926-SM-5L3I2 8.3
GTEX-T5JW-2026-SM-4DM63 8.3
GTEX-WYBS-0926-SM-3NM94 8.3
GTEX-RU72-0626-SM-46MUI 8.2
GTEX-UJHI-1426-SM-3DB9C 8.2
GTEX-ZF29-1926-SM-5S2P1 8.2
GTEX-ZTX8-1226-SM-4YCE9 8.2
GTEX-S341-1526-SM-4AD6K 8.0
GTEX-11DXW-0626-SM-5N9ER 7.9
GTEX-ZEX8-2226-SM-57WC6 7.9
GTEX-14AS3-1626-SM-5S2OY 7.8
GTEX-Y3IK-2326-SM-4WWDT 7.8
GTEX-13W3W-1226-SM-5LU4H 7.7
GTEX-QEG5-0726-SM-4R1JQ 7.7
GTEX-ZXES-0826-SM-5E43C 7.7
GTEX-111YS-1926-SM-5GICC 7.6
GTEX-11TT1-2126-SM-5GU5Y 7.5
GTEX-1269C-2426-SM-5FQSN 7.5
GTEX-13FHO-0826-SM-5L3E8 7.5
GTEX-Y111-2026-SM-4SOJA 7.5
GTEX-XMD1-0826-SM-4AT52 7.4
GTEX-12WSB-0626-SM-59HJO 7.3
GTEX-12ZZX-1126-SM-5EGKB 7.3
GTEX-131XW-0726-SM-5EGK3 7.3
GTEX-13NZB-2126-SM-5MR4Y 7.3
GTEX-11EM3-1326-SM-5N9C6 7.2
GTEX-131YS-0626-SM-5EGKL 7.1
GTEX-11GS4-2126-SM-5A5KR 7.0
GTEX-11P7K-0726-SM-5EGKX 7.0
GTEX-13O3P-0826-SM-5L3DH 7.0
GTEX-R55F-1726-SM-2TF4R 7.0
GTEX-YFC4-1426-SM-5IFJG 6.9
GTEX-13FTY-2226-SM-5J1ND 6.8
GTEX-ZAJG-0626-SM-5HL8X 6.8
GTEX-ZVT2-1826-SM-5NQ8W 6.8
GTEX-145MO-0826-SM-5NQBL 6.6
GTEX-SIU7-1626-SM-4BRUK 6.6
GTEX-14ABY-2126-SM-5QGQZ 6.4
GTEX-11EMC-2026-SM-5A5JV 6.2
GTEX-139T8-0826-SM-5L3DE 6.2
GTEX-ZLV1-1426-SM-4WWES 6.2
GTEX-ZTTD-1026-SM-51MRD 6.2
GTEX-13OW5-2226-SM-5L3HC 5.9
GTEX-XUJ4-1926-SM-4BOOV 5.9
GTEX-XUZC-1626-SM-4BRVP 5.9
GTEX-145LT-0726-SM-5S2VM 5.7
GTEX-132Q8-1426-SM-5EGK7 5.6
GTEX-ZC5H-2626-SM-5J2MG 5.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

20.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 20.2
FF:10080-102A8 77 years, female 20.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.