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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:127.8RPKM
FANTOM5:309.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Low
 

Antibody staining

Antibody HPA007730

 

Antibody CAB004682

 

Glial cells

Medium   Medium  

Neuronal cells

Not detected   Low  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

127.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 127.8
Samples: 117

Max RPKM: 285.1
Min RPKM: 67.6
Std RPKM: 35
Median RPKM: 122.2
GTEX-12WSA-0011-R5b-SM-5GU5I 285.1
GTEX-12WSB-0011-R5b-SM-5GU67 238.5
GTEX-144GO-0011-R5a-SM-5PNUR 220.5
GTEX-13JUV-0011-R5a-SM-5LZY5 212.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 210.3
GTEX-132Q8-0011-R5a-SM-5IJDM 196.6
GTEX-OHPN-0011-R5A-SM-2I5FF 195.3
GTEX-XMD1-0011-R5A-SM-4AT47 191.6
GTEX-139TT-0011-R5b-SM-5K7W8 188.4
GTEX-11H98-0011-R5b-SM-57WCF 182.2
GTEX-13NYS-0011-R5a-SM-5MR4D 175.0
GTEX-NL4W-0011-R5a-SM-2I3GD 162.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 160.6
GTEX-NL3H-0011-R5a-SM-2I3GB 158.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 157.2
GTEX-13CZV-0011-R5a-SM-5K7XA 154.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 154.6
GTEX-13X6K-0011-R5b-SM-5PNUE 154.2
GTEX-TSE9-0011-R5A-SM-3DB7J 153.4
GTEX-X4XX-0011-R5A-SM-46MWN 151.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 151.0
GTEX-13X6I-0011-R5a-SM-5PNWW 149.8
GTEX-13FLV-0011-R5a-SM-5LZWT 149.3
GTEX-13JVG-0011-R5a-SM-5MR4O 149.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 149.0
GTEX-P44H-0011-R5A-SM-2XCEX 148.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 148.6
GTEX-11WQC-0011-R5a-SM-5BC74 148.4
GTEX-QVJO-0011-R5A-SM-2S1QM 147.0
GTEX-13CIG-0011-R5b-SM-5L3F2 144.9
GTEX-NPJ7-0011-R5a-SM-33HBK 144.9
GTEX-RU72-0011-R5A-SM-2TF6U 144.4
GTEX-1445S-0011-R5a-SM-5PNUS 143.6
GTEX-12WSC-0011-R5b-SM-5CVNS 142.3
GTEX-S7SE-0011-R5A-SM-2XCDA 141.6
GTEX-T6MN-0011-R5A-SM-32QPD 140.3
GTEX-N7MT-0011-R5a-SM-2I3G6 139.3
GTEX-ZV68-0011-R5a-SM-4YCDW 138.2
GTEX-WWYW-0011-R5A-SM-3NB3E 135.9
GTEX-13OW6-0011-R5a-SM-5O9BK 135.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 134.6
GTEX-139T8-0011-R5b-SM-5J1MO 133.2
GTEX-ZE7O-0011-R5a-SM-57WBO 131.7
GTEX-T2IS-0011-R5A-SM-32QP4 131.6
GTEX-11GSP-0011-R5a-SM-57WBE 129.1
GTEX-12WSF-0011-R5a-SM-5HL8K 128.8
GTEX-X585-0011-R5A-SM-46MVI 128.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 127.3
GTEX-X261-0011-R5A-SM-3NMB4 126.5
GTEX-13OW5-0011-R5b-SM-5L3FR 126.2
GTEX-12WSD-0011-R5b-SM-5CVNG 126.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 126.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 126.0
GTEX-12ZZX-0011-R5a-SM-5HL89 125.8
GTEX-OXRN-0011-R5A-SM-2I5EF 125.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 124.5
GTEX-11OF3-0011-R5a-SM-57WB4 123.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 122.4
GTEX-139TS-0011-R5b-SM-5J2MZ 122.2
GTEX-QMR6-0011-R5A-SM-32PKT 121.5
GTEX-14BIM-0011-R5b-SM-5S2RM 120.9
GTEX-13G51-0011-R5a-SM-5L3EB 120.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 120.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 120.4
GTEX-RVPV-0011-R5A-SM-2TF69 120.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 119.8
GTEX-WVLH-0011-R5A-SM-3MJFW 119.7
GTEX-RVPU-0011-R5A-SM-2XCAD 119.0
GTEX-ZVT3-0011-R5a-SM-51MSI 118.1
GTEX-ZUA1-0011-R5b-SM-51MTG 117.1
GTEX-1399T-0011-R5b-SM-5IJDK 116.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 113.7
GTEX-ZXG5-0011-R5b-SM-57WBN 113.0
GTEX-12WSH-0011-R5b-SM-5P9F3 112.7
GTEX-13NYB-0011-R5a-SM-5MR45 112.7
GTEX-WZTO-0011-R5B-SM-3NMC5 112.7
GTEX-131YS-0011-R5b-SM-5K7YB 112.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 112.0
GTEX-13FLW-0011-R5a-SM-5LZX6 110.9
GTEX-UTHO-0011-R5A-SM-3GIJD 108.8
GTEX-WL46-0011-R5A-SM-3LK6V 108.7
GTEX-13OVH-0011-R5b-SM-5KM4L 106.7
GTEX-R55E-0011-R5A-SM-2TC5N 106.7
GTEX-N7MS-0011-R5a-SM-2HMK8 104.6
GTEX-YFC4-0011-R5a-SM-4RGLR 104.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 104.4
GTEX-13112-0011-R5b-SM-5DUV8 104.2
GTEX-11UD1-0011-R5b-SM-5P9FP 103.5
GTEX-1477Z-0011-R5b-SM-5PNUO 102.8
GTEX-T5JC-0011-R5A-SM-32PLK 102.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 102.2
GTEX-13OVL-0011-R5b-SM-5L3FU 102.1
GTEX-13VXU-0011-R5a-SM-5O9D7 101.9
GTEX-13X6J-0011-R5b-SM-5PNWT 101.9
GTEX-13SLX-0011-R5a-SM-5O9BV 101.5
GTEX-PVOW-0011-R5A-SM-32PL7 101.4
GTEX-145LS-0011-R5a-SM-5SI65 101.1
GTEX-XOTO-0011-R5A-SM-4B657 100.9
GTEX-14ABY-0011-R5b-SM-5SI7B 100.1
GTEX-13CF2-0011-R5a-SM-5LZWS 97.0
GTEX-S7PM-0011-R5A-SM-3NM8G 96.9
GTEX-1313W-0011-R5b-SM-5L3EP 95.8
GTEX-11NV4-0011-R5a-SM-5NQ88 93.8
GTEX-13FXS-0011-R5b-SM-5LZYE 92.4
GTEX-13OW7-0011-R5b-SM-5O9DM 92.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 89.6
GTEX-14BIN-0011-R5b-SM-5SI78 88.8
GTEX-13S7M-0011-R5b-SM-5P9HS 88.4
GTEX-144GL-0011-R5b-SM-5PNUJ 87.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 84.0
GTEX-YJ89-0011-R5a-SM-4V6GM 82.8
GTEX-145MH-0011-R5a-SM-5P9JT 79.1
GTEX-13O3O-0011-R5b-SM-5KM44 77.3
GTEX-145MG-0011-R5b-SM-5S2VU 75.8
GTEX-13NZA-0011-R5b-SM-5KM4K 75.7
GTEX-13FHP-0011-R5b-SM-5LZY2 71.0
GTEX-Z93S-0011-R5b-SM-4RGNI 67.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

309.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 309.4
FF:10164-103B2 76 years, female 360.5
FF:10379-105H1 89 years, female 258.2

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