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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:356.7TPM
GTEx:122.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA007730

 

Antibody CAB004682

 

Endothelial cells

Low   Not detected  

Glial cells

Medium   Medium  

Neuronal cells

Low   Medium  

Neuropil

Low   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

356.7

N/A Male, age 5
Sample 1
TPM: 437.9
overview Female, age 40
Sample 2
TPM: 218.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 413.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

122.0

GTEx sample id

RPKM

105.3118.7131.579.1166.2020406080100120140160180200220240
 
105.3118.7131.579.1166.2020406080100120140160180200220240

Brain - Cortex

Brain - Cortex
RPKM: 121.9
Samples: 114

Max RPKM: 258.5
Min RPKM: 62.7
Std RPKM: 24.9
Median RPKM: 118.7
GTEX-144FL-3026-SM-5O99C 258.5
GTEX-139T8-1026-SM-5J2MC 187.8
GTEX-NPJ8-1526-SM-2D7VU 166.2
GTEX-13X6K-2926-SM-5Q5D5 166.0
GTEX-NPJ7-2726-SM-2I3FT 165.7
GTEX-QVJO-1426-SM-2S1QY 164.8
GTEX-ZE7O-3126-SM-5HL5X 162.5
GTEX-PWO3-0926-SM-2I5EY 161.6
GTEX-1192X-3126-SM-5N9BY 160.3
GTEX-QVUS-2826-SM-3GADB 159.5
GTEX-RU72-3026-SM-5SI7Y 159.4
GTEX-132Q8-3026-SM-5PNVG 157.5
GTEX-13FHO-3026-SM-5J1O9 148.5
GTEX-13NYS-3126-SM-5KLYV 147.2
GTEX-12WSD-3126-SM-5HL7P 147.1
GTEX-11GSP-3226-SM-5986O 146.7
GTEX-ZZPT-3026-SM-5GZXH 145.1
GTEX-11EI6-3026-SM-5GZZO 142.7
GTEX-13G51-3026-SM-5IJB8 142.1
GTEX-UTHO-3026-SM-3GAFB 141.5
GTEX-13JUV-2926-SM-5LZX7 141.4
GTEX-12WSA-2926-SM-5EQ4D 139.2
GTEX-13OW8-2826-SM-5L3GC 136.7
GTEX-OXRN-2426-SM-2I5EQ 136.2
GTEX-11TTK-2926-SM-5PNYP 135.4
GTEX-ZAK1-3026-SM-5S2MJ 134.5
GTEX-14A5I-2926-SM-5Q5CQ 132.2
GTEX-13QIC-2926-SM-5J2NF 131.9
GTEX-11DXY-3226-SM-5GIDE 131.5
GTEX-1399T-3026-SM-5KLZC 131.5
GTEX-X4XX-3026-SM-3NMB2 131.2
GTEX-13IVO-2926-SM-5L3CZ 130.7
GTEX-1445S-3026-SM-5O9BR 130.3
GTEX-12ZZW-2926-SM-5LZUP 129.2
GTEX-12ZZZ-3026-SM-5BC67 128.8
GTEX-X585-3026-SM-46MWF 128.1
GTEX-13JVG-3126-SM-5L3FH 128.0
GTEX-14BMV-3026-SM-5S2PQ 128.0
GTEX-145MG-3026-SM-5RQJA 127.9
GTEX-12ZZY-3026-SM-5GCOU 126.9
GTEX-11OC5-0726-SM-5P9JK 126.6
GTEX-13NYC-2826-SM-5K7WR 126.6
GTEX-ZVT3-3026-SM-5E43N 126.0
GTEX-11EMC-3226-SM-5EGKW 125.7
GTEX-11GSO-2926-SM-5HL73 125.7
GTEX-131XW-3126-SM-5LZUC 125.6
GTEX-144GL-3026-SM-5Q5CW 122.9
GTEX-11NUK-2926-SM-5A5MD 122.6
GTEX-11ONC-2926-SM-5P9JM 122.6
GTEX-XLM4-3026-SM-4AT6L 122.0
GTEX-R55F-1326-SM-5S2V4 121.5
GTEX-WZTO-2926-SM-3NM9I 120.5
GTEX-1128S-2726-SM-5H12C 120.3
GTEX-13OW6-3026-SM-5J2MI 120.1
GTEX-QMR6-1426-SM-32PLA 119.3
GTEX-11GS4-3126-SM-5A5LH 118.9
GTEX-145LS-3126-SM-5Q5BY 118.8
GTEX-14ASI-3026-SM-5S2PN 118.5
GTEX-13FLW-1426-SM-5K7YE 117.6
GTEX-Y8DK-0826-SM-4TT3T 117.6
GTEX-13NYB-3026-SM-5IJD7 116.9
GTEX-WWYW-3126-SM-3NB39 116.0
GTEX-11PRG-2926-SM-5987A 115.9
GTEX-QDT8-2926-SM-32PKC 115.8
GTEX-111FC-3126-SM-5GZZ2 115.6
GTEX-12WSC-3026-SM-5GCNF 115.4
GTEX-N7MT-1126-SM-5SI7V 114.3
GTEX-WHSE-3026-SM-3P5ZH 114.0
GTEX-13FHP-3026-SM-5IJBS 113.6
GTEX-WVLH-3026-SM-3MJG9 111.9
GTEX-13X6J-3026-SM-5Q5CU 111.8
GTEX-1117F-3226-SM-5N9CT 111.6
GTEX-11DXW-1126-SM-5H12Q 111.6
GTEX-13FXS-3126-SM-5J2NN 110.9
GTEX-YJ89-3026-SM-5IFJI 110.9
GTEX-13OVH-3026-SM-5MR4N 110.5
GTEX-12WSH-3026-SM-5CVNI 110.2
GTEX-13S7M-3126-SM-5RQJQ 109.4
GTEX-131YS-3126-SM-5KLYT 107.9
GTEX-13SLX-3126-SM-5S2Q5 107.8
GTEX-1313W-3126-SM-5LZUI 106.8
GTEX-13O3Q-2926-SM-5KM45 106.5
GTEX-RNOR-2326-SM-2TF4I 106.2
GTEX-117XS-3026-SM-5N9CA 105.9
GTEX-13O3O-3126-SM-5KM3H 105.4
GTEX-13OVJ-2826-SM-5L3GW 105.3
GTEX-145MF-2726-SM-5O995 105.3
GTEX-T2IS-3026-SM-32QPM 104.8
GTEX-13OW7-3026-SM-5L3GY 104.2
GTEX-ZYFD-3026-SM-5E44C 103.7
GTEX-ZUA1-3026-SM-59HJC 103.0
GTEX-T6MN-2626-SM-32PMQ 102.9
GTEX-147GR-3026-SM-5S2ML 102.4
GTEX-12ZZX-2926-SM-5GCOQ 102.3
GTEX-145MH-3026-SM-5Q5DZ 102.0
GTEX-PVOW-2526-SM-2XCF7 101.9
GTEX-YFC4-3126-SM-5PNV6 101.7
GTEX-13PL6-3126-SM-5LUAR 101.4
GTEX-XOTO-3026-SM-4B65M 101.1
GTEX-Y111-2726-SM-4TT3N 100.3
GTEX-WL46-2926-SM-3LK82 98.6
GTEX-Q2AG-2926-SM-2HMJ3 98.5
GTEX-13VXU-2926-SM-5LU5C 97.9
GTEX-11NV4-2126-SM-5N9DS 97.6
GTEX-TSE9-3026-SM-3DB76 97.0
GTEX-T5JC-2426-SM-3NMDB 95.4
GTEX-11WQK-3026-SM-5EQL6 94.9
GTEX-12126-1026-SM-5P9JJ 93.9
GTEX-13PVQ-3026-SM-5SI93 91.0
GTEX-11O72-2926-SM-5BC4V 85.0
GTEX-ZAJG-3126-SM-5HL9J 85.0
GTEX-11ZUS-2926-SM-5FQSL 81.6
GTEX-Z93S-2926-SM-57WB9 79.1
GTEX-11OF3-2926-SM-5HL78 62.7
Show all
104.4114.3134.776.8176.5020406080100120140160180200220240260
 
104.4114.3134.776.8176.5020406080100120140160180200220240260

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 122.1
Samples: 108

Max RPKM: 279
Min RPKM: 76.8
Std RPKM: 29.5
Median RPKM: 114.3
GTEX-12WSD-0011-R10b-SM-5GU79 279.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 200.7
GTEX-1445S-0011-R10a-SM-5PNWB 196.9
GTEX-12WSA-0011-R10b-SM-5P9ET 190.0
GTEX-13NYS-0011-R10a-SM-5MR4S 176.5
GTEX-QVUS-0011-R10A-SM-3GIK3 168.2
GTEX-13JUV-0011-R10b-SM-5LZXR 166.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 165.8
GTEX-RVPU-0011-R10A-SM-2XCAH 165.4
GTEX-139TS-0011-R10a-SM-5K7TU 164.1
GTEX-NL4W-0011-R10A-SM-2I3DY 158.0
GTEX-XMD1-0011-R10A-SM-4AT4A 156.8
GTEX-11H98-0011-R10b-SM-5NQ98 156.1
GTEX-P44H-0011-R10A-SM-2XCEK 154.8
GTEX-13X6K-0011-R10a-SM-5P9JR 152.8
GTEX-13N2G-0011-R10a-SM-5MR34 151.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 149.3
GTEX-13SLW-0011-R10a-SM-5S2UI 147.9
GTEX-14BIL-0011-R10a-SM-5SI75 147.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 146.6
GTEX-11WQC-0011-R10a-SM-57WCT 145.9
GTEX-ZV68-0011-R10a-SM-51MT7 144.5
GTEX-147GR-0011-R10b-SM-5S2UM 142.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 142.1
GTEX-WWYW-0011-R10A-SM-3NB35 140.8
GTEX-13OW8-0011-R10a-SM-5L3H6 138.7
GTEX-13X6I-0011-R10a-SM-5PNWI 136.8
GTEX-1477Z-0011-R10b-SM-5S2RF 134.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 132.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 129.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 128.9
GTEX-13O3O-0011-R10a-SM-5LUA9 128.0
GTEX-X4EP-0011-R10B-SM-4QASJ 127.7
GTEX-OXRN-0011-R10A-SM-2I5GC 127.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 126.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 126.4
GTEX-XLM4-0011-R10A-SM-4AT5P 124.1
GTEX-QMR6-0011-R10A-SM-32PKO 123.9
GTEX-13FHO-0011-R10b-SM-5J2MM 123.7
GTEX-145LU-0011-R10a-SM-5PNWJ 123.7
GTEX-145MG-0011-R10a-SM-5PNWG 122.9
GTEX-131XW-0011-R10a-SM-5DUVA 122.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 121.7
GTEX-ZF28-0011-R10a-SM-4WWEH 121.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 120.7
GTEX-OXRO-0011-R10A-SM-2I5EH 118.7
GTEX-ZUA1-0011-R10a-SM-51MT6 117.4
GTEX-ZVT3-0011-R10b-SM-57WB6 116.6
GTEX-13OW6-0011-R10a-SM-5L3HE 115.4
GTEX-14BIN-0011-R10a-SM-5S2UA 115.3
GTEX-S7SE-0011-R10A-SM-2XCDF 115.0
GTEX-12WSH-0011-R10a-SM-5LZUS 114.6
GTEX-13FXS-0011-R10a-SM-5J2MA 114.5
GTEX-13O3Q-0011-R10b-SM-5KM39 114.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 114.2
GTEX-147F4-0011-R10b-SM-5S2WC 114.1
GTEX-N7MT-0011-R10A-SM-2I3E1 113.7
GTEX-13QIC-0011-R10a-SM-5O9C7 113.3
GTEX-13CZV-0011-R10b-SM-5LZYD 113.2
GTEX-TSE9-0011-R10A-SM-3DB7O 113.1
GTEX-12WSF-0011-R10a-SM-5LZVH 112.4
GTEX-X4XX-0011-R10B-SM-46MWO 112.1
GTEX-YFC4-0011-R10a-SM-4SOK5 111.8
GTEX-13FLW-0011-R10b-SM-5LZZF 111.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 111.3
GTEX-YJ89-0011-R10a-SM-4SOK9 111.2
GTEX-13SLX-0011-R10a-SM-5P9HV 111.0
GTEX-13X6J-0011-R10b-SM-5PNWA 110.3
GTEX-12WSC-0011-R10a-SM-5GU57 109.8
GTEX-X585-0011-R10A-SM-46MUY 108.4
GTEX-NL3H-0011-R10A-SM-2I3E9 108.1
GTEX-11ZUS-0011-R10b-SM-5BC79 107.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 107.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 107.7
GTEX-14753-0011-R10b-SM-5S2WE 107.7
GTEX-T5JC-0011-R10A-SM-32PM2 106.2
GTEX-T6MN-0011-R10A-SM-32QP7 105.6
GTEX-13QJC-0011-R10a-SM-5SI63 105.3
GTEX-13S7M-0011-R10b-SM-5PNZB 105.2
GTEX-12WSM-0011-R10a-SM-5DUWV 104.5
GTEX-WVLH-0011-R10A-SM-3MJFM 104.5
GTEX-13NYB-0011-R10a-SM-5KM43 104.1
GTEX-13JVG-0011-R10b-SM-5KM2P 104.0
GTEX-N7MS-0011-R10A-SM-2HMJK 102.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 102.6
GTEX-13OVL-0011-R10a-SM-5L3GS 102.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 101.1
GTEX-Z93S-0011-R10a-SM-4RGNM 100.7
GTEX-13OW7-0011-R10a-SM-5L3H3 99.5
GTEX-131YS-0011-R10b-SM-5EQ5N 99.1
GTEX-131XH-0011-R10a-SM-5EGLJ 98.9
GTEX-145LS-0011-R10a-SM-5PNUQ 97.5
GTEX-QDT8-0011-R10A-SM-32PKG 97.1
GTEX-12126-0011-R10b-SM-5BC6T 96.9
GTEX-13NZA-0011-R10b-SM-5KM54 96.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 94.9
GTEX-1313W-0011-R10b-SM-5DUXA 93.6
GTEX-ZXG5-0011-R10a-SM-57WDD 93.6
GTEX-145MH-0011-R10b-SM-5PNUK 93.5
GTEX-11WQK-0011-R10a-SM-5BC6R 92.5
GTEX-WZTO-0011-R10B-SM-4E3KB 91.4
GTEX-13G51-0011-R10b-SM-5LZYF 87.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 87.3
GTEX-13IVO-0011-R10a-SM-5LZY3 83.5
GTEX-WL46-0011-R10A-SM-3MJFQ 80.8
GTEX-12WSE-0011-R10b-SM-5P9JV 80.0
GTEX-X261-0011-R10B-SM-4E3JT 77.2
GTEX-13N1W-0011-R10b-SM-5MR4H 76.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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