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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:52.7TPM
GTEx:16.9RPKM
FANTOM5:50.2Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA002967

 

Antibody HPA018505

 

Cells in red pulp

Medium   Not detected  

Cells in white pulp

High   Not detected  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

52.7

overview Female, age 60
Sample 1
TPM: 46.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 46.1
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 50.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 41.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 79.2
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

16.9

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 16.9
Samples: 104

Max RPKM: 32.2
Min RPKM: 9.6
Std RPKM: 3.6
Median RPKM: 16.5
GTEX-13FH7-1326-SM-5IFG8 32.2
GTEX-146FR-1926-SM-5NQA6 27.3
GTEX-13U4I-1626-SM-5IFFR 24.6
GTEX-147F3-0126-SM-5NQBJ 23.7
GTEX-XMK1-0126-SM-4B65F 23.2
GTEX-11P7K-0426-SM-5BC5H 22.7
GTEX-11P81-1326-SM-5GU5S 22.6
GTEX-Y5LM-0326-SM-4VBRN 22.5
GTEX-ZP4G-0326-SM-4YCEF 22.1
GTEX-OOBJ-0926-SM-48TDO 21.7
GTEX-XGQ4-0126-SM-4AT4H 21.7
GTEX-11DXX-0726-SM-5H12X 21.0
GTEX-11NSD-0426-SM-5N9CR 21.0
GTEX-ZVP2-0526-SM-51MSC 21.0
GTEX-11VI4-0126-SM-5GU6Z 20.8
GTEX-VJYA-0126-SM-4KL1P 20.8
GTEX-1399S-0226-SM-5IFFG 20.7
GTEX-13VXT-1326-SM-5LU3Y 20.5
GTEX-13N11-0126-SM-5KM2Z 20.2
GTEX-ZPU1-1026-SM-4YCEQ 20.0
GTEX-ZV6S-0826-SM-5NQ6Z 19.9
GTEX-1211K-0426-SM-5FQTP 19.7
GTEX-144GN-2126-SM-5O99D 19.5
GTEX-XAJ8-0126-SM-47JYG 19.3
GTEX-QV31-0126-SM-447BP 18.7
GTEX-Z9EW-0726-SM-5HL9H 18.7
GTEX-X3Y1-0126-SM-4PQZA 18.6
GTEX-X4LF-0226-SM-4QAS8 18.3
GTEX-ZYWO-0226-SM-5GZX3 18.2
GTEX-ZZPU-0126-SM-5E446 18.1
GTEX-11XUK-0426-SM-5EQML 18.0
GTEX-U3ZH-0126-SM-4DXUK 18.0
GTEX-Y8LW-0126-SM-4VBS1 17.9
GTEX-XXEK-0126-SM-4BRVU 17.8
GTEX-W5WG-0626-SM-4SOID 17.7
GTEX-1122O-0526-SM-5N9DM 17.6
GTEX-11LCK-0126-SM-5A5M5 17.6
GTEX-QLQW-0126-SM-447BK 17.6
GTEX-139YR-0426-SM-5IFFV 17.5
GTEX-ZYFG-0726-SM-5GIDX 17.5
GTEX-Y3IK-0126-SM-4WWE9 17.4
GTEX-1399R-0226-SM-5IJGG 17.3
GTEX-WFON-0126-SM-4LVM9 17.3
GTEX-145MN-0126-SM-5RQHY 17.1
GTEX-UJHI-0126-SM-4IHLP 17.0
GTEX-13PVR-0326-SM-5RQJY 16.9
GTEX-ZAB5-0526-SM-5CVMU 16.9
GTEX-11EQ9-0426-SM-5A5JY 16.7
GTEX-131XE-1126-SM-5EGHW 16.7
GTEX-Q2AH-0226-SM-48U1I 16.6
GTEX-WHWD-0126-SM-4OORS 16.6
GTEX-13111-0126-SM-5EGHO 16.5
GTEX-YFCO-0926-SM-5LUA5 16.5
GTEX-PX3G-0926-SM-48U12 16.4
GTEX-QCQG-0226-SM-48U28 16.4
GTEX-R55G-0226-SM-48FEI 16.4
GTEX-QV44-0126-SM-4R1KH 16.3
GTEX-ZDTT-1026-SM-5KM19 16.3
GTEX-14DAR-0326-SM-5S2PS 16.2
GTEX-U3ZN-0126-SM-4DXUM 16.1
GTEX-139T6-0226-SM-5IFGZ 16.0
GTEX-T5JW-0126-SM-4DM6K 16.0
GTEX-YEC4-0126-SM-4W21T 16.0
GTEX-13PL7-1126-SM-5MR5O 15.9
GTEX-ZLFU-0526-SM-4WWBN 15.7
GTEX-146FQ-0626-SM-5LU9U 15.6
GTEX-12WSK-0126-SM-5GCO7 15.4
GTEX-PLZ6-0126-SM-48TC6 15.4
GTEX-ZVZP-0726-SM-59HKA 15.3
GTEX-117YX-2126-SM-5GIEL 15.2
GTEX-13S86-0126-SM-5S2PI 15.2
GTEX-13X6H-0726-SM-5Q5BX 15.2
GTEX-QMRM-0226-SM-4R1K7 15.1
GTEX-XQ8I-1726-SM-4BOQB 15.1
GTEX-12BJ1-0726-SM-5EGGF 15.0
GTEX-ZLWG-0426-SM-4WWFA 15.0
GTEX-POMQ-0126-SM-48TD6 14.9
GTEX-UPK5-1626-SM-4JBHI 14.9
GTEX-PW2O-0126-SM-48TC8 14.7
GTEX-Y3I4-0126-SM-4TT26 14.5
GTEX-Y114-0726-SM-4TT6U 14.4
GTEX-13CF3-0226-SM-5J1NW 14.3
GTEX-X585-1826-SM-4QAS3 14.3
GTEX-14E6E-1226-SM-5S2R5 14.1
GTEX-132QS-0226-SM-5IFFZ 13.8
GTEX-XUJ4-0226-SM-4BOP8 13.7
GTEX-U4B1-0526-SM-4DXTK 13.6
GTEX-YB5K-1926-SM-4VDT4 13.5
GTEX-P4PP-0926-SM-48TBZ 13.3
GTEX-O5YT-0926-SM-48TDG 13.0
GTEX-S4Z8-0226-SM-4AD5K 12.9
GTEX-XPVG-0626-SM-4B65B 12.7
GTEX-12WSG-0926-SM-5EGIH 12.6
GTEX-12WSJ-0526-SM-5GCOZ 12.5
GTEX-OIZH-0926-SM-48TBR 12.5
GTEX-QDVN-0526-SM-48TZ4 12.5
GTEX-12WSN-0126-SM-5DUX5 12.4
GTEX-YB5E-0426-SM-5IFHR 12.3
GTEX-S3XE-0626-SM-4AD6B 11.2
GTEX-Q734-0226-SM-48U1A 11.1
GTEX-P4QS-0926-SM-48TBS 10.8
GTEX-XV7Q-0126-SM-4BRVK 10.6
GTEX-RUSQ-0126-SM-47JWV 9.8
GTEX-131XG-0426-SM-5IFGD 9.6
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

50.2

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 50.2
FF:10025-101D7 39,50,70 years, male 50.2

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