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TNFAIP3
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

TNFAIP3

Gene description

Tumor necrosis factor, alpha-induced protein 3

Protein class

Cancer-related genes
Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

10
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Mixed
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in all tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
HPA002116
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
N/A
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Bone marrow

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

TNFAIP3 (HGNC Symbol)

Synonyms

A20, OTUD7C

Description

Tumor necrosis factor, alpha-induced protein 3 (HGNC Symbol)

Entrez gene summary

This gene was identified as a gene whose expression is rapidly induced by the tumor necrosis factor (TNF). The protein encoded by this gene is a zinc finger protein and ubiqitin-editing enzyme, and has been shown to inhibit NF-kappa B activation as well as TNF-mediated apoptosis. The encoded protein, which has both ubiquitin ligase and deubiquitinase activities, is involved in the cytokine-mediated immune and inflammatory responses. Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2012]

Chromosome

6

Cytoband

q23.3

Chromosome location (bp)

137867188 - 137883312

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000118503 (version 83.38)

Entrez gene

7128

UniProt

P21580 (UniProt - Evidence at protein level)

neXtProt

NX_P21580

Antibodypedia

TNFAIP3 antibodies

PROTEIN BROWSER

TNFAIP3-001
TNFAIP3-002
TNFAIP3-003
TNFAIP3-004
TNFAIP3-201
TNFAIP3-202
TNFAIP3-203
TNFAIP3-204
TNFAIP3-205
TNFAIP3-206

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TNFAIP3-001
ENSP00000237289
ENST00000237289
P21580 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3 A20p50 A20p37
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001922 [B-1 B cell homeostasis]
GO:0002020 [protease binding]
GO:0002237 [response to molecule of bacterial origin]
GO:0002634 [regulation of germinal center formation]
GO:0003677 [DNA binding]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0004843 [ubiquitin-specific protease activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005813 [centrosome]
GO:0005829 [cytosol]
GO:0006915 [apoptotic process]
GO:0006954 [inflammatory response]
GO:0007166 [cell surface receptor signaling pathway]
GO:0008270 [zinc ion binding]
GO:0010803 [regulation of tumor necrosis factor-mediated signaling pathway]
GO:0016579 [protein deubiquitination]
GO:0016874 [ligase activity]
GO:0031397 [negative regulation of protein ubiquitination]
GO:0032088 [negative regulation of NF-kappaB transcription factor activity]
GO:0032480 [negative regulation of type I interferon production]
GO:0032703 [negative regulation of interleukin-2 production]
GO:0032715 [negative regulation of interleukin-6 production]
GO:0032720 [negative regulation of tumor necrosis factor production]
GO:0033209 [tumor necrosis factor-mediated signaling pathway]
GO:0034136 [negative regulation of toll-like receptor 2 signaling pathway]
GO:0034140 [negative regulation of toll-like receptor 3 signaling pathway]
GO:0034144 [negative regulation of toll-like receptor 4 signaling pathway]
GO:0035871 [protein K11-linked deubiquitination]
GO:0035872 [nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway]
GO:0043124 [negative regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043130 [ubiquitin binding]
GO:0043621 [protein self-association]
GO:0045087 [innate immune response]
GO:0045732 [positive regulation of protein catabolic process]
GO:0045779 [negative regulation of bone resorption]
GO:0045824 [negative regulation of innate immune response]
GO:0048662 [negative regulation of smooth muscle cell proliferation]
GO:0050691 [regulation of defense response to virus by host]
GO:0050727 [regulation of inflammatory response]
GO:0050728 [negative regulation of inflammatory response]
GO:0050869 [negative regulation of B cell activation]
GO:0051259 [protein oligomerization]
GO:0061043 [regulation of vascular wound healing]
GO:0070062 [extracellular exosome]
GO:0070301 [cellular response to hydrogen peroxide]
GO:0070423 [nucleotide-binding oligomerization domain containing signaling pathway]
GO:0070530 [K63-linked polyubiquitin binding]
GO:0070536 [protein K63-linked deubiquitination]
GO:0070936 [protein K48-linked ubiquitination]
GO:0071108 [protein K48-linked deubiquitination]
GO:0071222 [cellular response to lipopolysaccharide]
GO:0071947 [protein deubiquitination involved in ubiquitin-dependent protein catabolic process]
GO:0072573 [tolerance induction to lipopolysaccharide]
GO:0090291 [negative regulation of osteoclast proliferation]
GO:1902042 [negative regulation of extrinsic apoptotic signaling pathway via death domain receptors]
GO:2000349 [negative regulation of CD40 signaling pathway]
GO:2000352 [negative regulation of endothelial cell apoptotic process]
Show all
790 aa
89.6 kDa
No 0
TNFAIP3-002
ENSP00000393577
ENST00000421450
Q5VXR0 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
26 aa
3 kDa
No 0
TNFAIP3-003
ENSP00000401562
ENST00000420009
Q5VXQ8 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
162 aa
19.2 kDa
No 0
TNFAIP3-004
ENSP00000409845
ENST00000433680
Q5VXQ9 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
98 aa
11.8 kDa
No 0
TNFAIP3-201
ENSP00000481570
ENST00000612899
P21580 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3 A20p50 A20p37
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001922 [B-1 B cell homeostasis]
GO:0002020 [protease binding]
GO:0002237 [response to molecule of bacterial origin]
GO:0002634 [regulation of germinal center formation]
GO:0002677 [negative regulation of chronic inflammatory response]
GO:0003677 [DNA binding]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0004843 [ubiquitin-specific protease activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005813 [centrosome]
GO:0005829 [cytosol]
GO:0006915 [apoptotic process]
GO:0006954 [inflammatory response]
GO:0007166 [cell surface receptor signaling pathway]
GO:0008270 [zinc ion binding]
GO:0010803 [regulation of tumor necrosis factor-mediated signaling pathway]
GO:0016579 [protein deubiquitination]
GO:0016874 [ligase activity]
GO:0019900 [kinase binding]
GO:0031397 [negative regulation of protein ubiquitination]
GO:0032088 [negative regulation of NF-kappaB transcription factor activity]
GO:0032480 [negative regulation of type I interferon production]
GO:0032495 [response to muramyl dipeptide]
GO:0032691 [negative regulation of interleukin-1 beta production]
GO:0032703 [negative regulation of interleukin-2 production]
GO:0032715 [negative regulation of interleukin-6 production]
GO:0032720 [negative regulation of tumor necrosis factor production]
GO:0033209 [tumor necrosis factor-mediated signaling pathway]
GO:0034136 [negative regulation of toll-like receptor 2 signaling pathway]
GO:0034140 [negative regulation of toll-like receptor 3 signaling pathway]
GO:0034144 [negative regulation of toll-like receptor 4 signaling pathway]
GO:0034148 [negative regulation of toll-like receptor 5 signaling pathway]
GO:0035871 [protein K11-linked deubiquitination]
GO:0035872 [nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway]
GO:0043124 [negative regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043130 [ubiquitin binding]
GO:0043621 [protein self-association]
GO:0045087 [innate immune response]
GO:0045732 [positive regulation of protein catabolic process]
GO:0045736 [negative regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0045779 [negative regulation of bone resorption]
GO:0045824 [negative regulation of innate immune response]
GO:0048662 [negative regulation of smooth muscle cell proliferation]
GO:0050691 [regulation of defense response to virus by host]
GO:0050727 [regulation of inflammatory response]
GO:0050728 [negative regulation of inflammatory response]
GO:0050869 [negative regulation of B cell activation]
GO:0051259 [protein oligomerization]
GO:0060548 [negative regulation of cell death]
GO:0061043 [regulation of vascular wound healing]
GO:0070062 [extracellular exosome]
GO:0070301 [cellular response to hydrogen peroxide]
GO:0070423 [nucleotide-binding oligomerization domain containing signaling pathway]
GO:0070429 [negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway]
GO:0070433 [negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway]
GO:0070530 [K63-linked polyubiquitin binding]
GO:0070536 [protein K63-linked deubiquitination]
GO:0070936 [protein K48-linked ubiquitination]
GO:0071108 [protein K48-linked deubiquitination]
GO:0071222 [cellular response to lipopolysaccharide]
GO:0071947 [protein deubiquitination involved in ubiquitin-dependent protein catabolic process]
GO:0072573 [tolerance induction to lipopolysaccharide]
GO:0072666 [establishment of protein localization to vacuole]
GO:0090291 [negative regulation of osteoclast proliferation]
GO:1902042 [negative regulation of extrinsic apoptotic signaling pathway via death domain receptors]
GO:1903364 [positive regulation of cellular protein catabolic process]
GO:2000347 [positive regulation of hepatocyte proliferation]
GO:2000349 [negative regulation of CD40 signaling pathway]
GO:2000352 [negative regulation of endothelial cell apoptotic process]
Show all
790 aa
89.6 kDa
No 0
TNFAIP3-202
ENSP00000481122
ENST00000614035
A0A087WXL5 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0008270 [zinc ion binding]
Show all
470 aa
54.3 kDa
No 0
TNFAIP3-203
ENSP00000479556
ENST00000615468
A0A087WVN3 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
214 aa
25.5 kDa
No 0
TNFAIP3-204
ENSP00000478438
ENST00000619035
A0A087WU80 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0008270 [zinc ion binding]
Show all
749 aa
84.9 kDa
No 0
TNFAIP3-205
ENSP00000481454
ENST00000620204
D3TTY5 [Direct mapping]
Truncated tumor necrosis factor alpha-induced protein 3; Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0008270 [zinc ion binding]
Show all
669 aa
76.2 kDa
No 0
TNFAIP3-206
ENSP00000484332
ENST00000621150
A0A087X1N1 [Direct mapping]
Tumor necrosis factor alpha-induced protein 3
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Nonsense Mutations
   COSMIC Large Deletions
   COSMIC Frameshift Mutations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0008270 [zinc ion binding]
Show all
531 aa
61.1 kDa
No 0

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