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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:30.9TPM
GTEx:22.5RPKM
FANTOM5:57.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA002116

 

Glandular cells

Low  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

30.9

overview Male, age 65
Sample 1
TPM: 21.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 30.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 39.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 32.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

22.5

GTEx sample id

RPKM

11.618.329.05.453.20102030405060708090
 
11.618.329.05.453.20102030405060708090

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 22.5
Samples: 88

Max RPKM: 90.3
Min RPKM: 5.4
Std RPKM: 14.5
Median RPKM: 18.3
GTEX-1399U-2126-SM-5IFEZ 90.3
GTEX-UPK5-2026-SM-4JBIM 66.8
GTEX-131XG-1726-SM-5LZUR 61.8
GTEX-WRHK-1026-SM-4MVOD 53.2
GTEX-VUSG-1726-SM-4KKZL 44.2
GTEX-ZVP2-1726-SM-5GU5P 43.3
GTEX-13O61-1326-SM-5KM31 41.7
GTEX-14E6E-1626-SM-5RQI7 41.5
GTEX-ZVT2-2126-SM-5NQ93 41.3
GTEX-X15G-1426-SM-4PQZK 41.2
GTEX-12BJ1-1926-SM-5HL9Z 40.5
GTEX-ZZ64-0526-SM-5GZXM 38.3
GTEX-XAJ8-0526-SM-47JYK 36.6
GTEX-Z9EW-0926-SM-5CVMM 36.6
GTEX-WFJO-0926-SM-4LVM2 36.1
GTEX-11XUK-1426-SM-5EQMG 34.4
GTEX-13FH7-1226-SM-5IJFK 34.1
GTEX-ZVZP-1826-SM-5GZXB 32.6
GTEX-13FTW-2026-SM-5IJE2 30.8
GTEX-11NSD-1726-SM-5N9C3 30.0
GTEX-XBED-1426-SM-4AT4G 29.6
GTEX-WFG8-1626-SM-4LVMB 29.6
GTEX-1399S-2026-SM-5KM4B 28.8
GTEX-ZC5H-2326-SM-4WAYT 28.5
GTEX-ZQUD-0926-SM-57WE3 27.4
GTEX-13QBU-1926-SM-5IJEW 26.5
GTEX-13CF3-1226-SM-5LZXN 26.5
GTEX-ZLFU-1526-SM-4WWBT 25.4
GTEX-14DAR-1426-SM-5RQIR 25.1
GTEX-1192X-2526-SM-59868 24.9
GTEX-11P82-0826-SM-5P9GU 24.6
GTEX-Y114-1426-SM-4TT6W 24.6
GTEX-WEY5-1526-SM-4LMJF 23.7
GTEX-ZEX8-1826-SM-57WBH 23.6
GTEX-145ME-0926-SM-5O9AR 21.9
GTEX-ZP4G-1626-SM-57WGD 21.9
GTEX-11VI4-1626-SM-5EQKO 21.7
GTEX-13111-1426-SM-5DUW3 21.6
GTEX-11DXX-1626-SM-5H11H 21.3
GTEX-WH7G-1626-SM-4LVMY 20.8
GTEX-ZTX8-0526-SM-59HLD 20.5
GTEX-139T6-1026-SM-5IJGC 19.6
GTEX-ZYFG-2026-SM-5E43Y 19.3
GTEX-13RTK-0826-SM-5Q5C6 18.5
GTEX-148VJ-2226-SM-5NQ9M 18.1
GTEX-XGQ4-1326-SM-4GIDU 17.6
GTEX-ZQG8-2526-SM-57WEQ 17.2
GTEX-11P7K-1626-SM-5GU63 17.0
GTEX-117YX-0326-SM-5GICL 15.8
GTEX-WFG7-1726-SM-4LVME 15.6
GTEX-XXEK-1026-SM-4BRUW 15.4
GTEX-VJYA-0926-SM-4KL1N 15.2
GTEX-ZPIC-2326-SM-57WDW 15.1
GTEX-145LT-1026-SM-5LU9O 15.1
GTEX-ZYWO-1526-SM-5SIAL 15.1
GTEX-1399R-2026-SM-5K7WN 14.8
GTEX-111CU-1326-SM-5NQ8L 14.5
GTEX-11I78-1126-SM-5A5K5 14.2
GTEX-ZA64-1226-SM-5HL7B 14.0
GTEX-13O21-1026-SM-5IJDU 13.5
GTEX-11EQ9-1326-SM-5985X 13.3
GTEX-ZTPG-2626-SM-57WFX 13.1
GTEX-11DXZ-1326-SM-5H11X 12.8
GTEX-13PL7-2626-SM-5IFH4 12.6
GTEX-ZTSS-0926-SM-59865 11.9
GTEX-ZLV1-1126-SM-4WWBW 11.6
GTEX-133LE-1426-SM-5IFH1 11.4
GTEX-131XF-1326-SM-5GCMQ 11.2
GTEX-X5EB-1626-SM-4E3IV 10.8
GTEX-111YS-1426-SM-5GID8 10.7
GTEX-1122O-1326-SM-5H11F 10.7
GTEX-XUZC-1426-SM-4BRV3 10.6
GTEX-139YR-2226-SM-5IFFW 10.5
GTEX-YEC4-1726-SM-4W21E 10.4
GTEX-Y9LG-1626-SM-5IFHM 10.3
GTEX-13113-1226-SM-5EGHT 10.0
GTEX-YF7O-1826-SM-5IFIU 9.9
GTEX-YB5E-1526-SM-5IFIE 9.8
GTEX-13D11-0726-SM-5LZZB 9.4
GTEX-Y5LM-1626-SM-4VDTB 9.2
GTEX-WQUQ-2426-SM-4MVNW 9.1
GTEX-ZXES-1526-SM-5NQ95 9.1
GTEX-12WSK-1526-SM-5CVNO 8.7
GTEX-ZPCL-1726-SM-57WEO 7.8
GTEX-XMK1-1826-SM-4B66F 6.9
GTEX-ZF2S-1726-SM-57WFT 6.3
GTEX-Y3IK-1726-SM-4YCCR 6.0
GTEX-13OVI-1926-SM-5IJCG 5.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

57.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 57.0
FF:10024-101D6 15,40,85 years, mixed 57.0

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The Human Protein Atlas project is funded
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