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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.3TPM
GTEx:1.0RPKM
FANTOM5:5.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA003595

  

Antibody HPA024006

  

Antibody CAB009434

  

Antibody CAB056159

  

Adipocytes

 Not detected   Not detected   Low   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected  

Chondrocytes

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA003595

  

Antibody HPA024006

  

Antibody CAB009434

  

Antibody CAB056159

  

Adipocytes

 Not detected   Not detected   Not detected   Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

2.3
N/A Female, age 80
Sample 1
TPM: 0.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 0.0
N/A Female, age 57
Sample 3
TPM: 0.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 1.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 9.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

1.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 0.6
Samples: 350

Max RPKM: 7.8
Min RPKM: 0
Std RPKM: 0.7
Median RPKM: 0.4
GTEX-P44H-0326-SM-2XCES 7.8
GTEX-P4QT-0226-SM-3LK68 4.5
GTEX-SN8G-0226-SM-4DM6B 4.3
GTEX-ZTPG-0226-SM-5O99I 4.1
GTEX-144FL-0226-SM-5Q5D4 3.8
GTEX-YFCO-2026-SM-4W21Q 3.5
GTEX-S4Q7-1626-SM-3K2AE 3.4
GTEX-ZAJG-0226-SM-5HL81 3.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 1.7
Samples: 227

Max RPKM: 35.1
Min RPKM: 0
Std RPKM: 3.9
Median RPKM: 0.6
GTEX-ZVZP-1126-SM-5GICU 35.1
GTEX-WY7C-0926-SM-3NB34 28.7
GTEX-Y9LG-1226-SM-4VBQA 25.9
GTEX-11EM3-1126-SM-5A5KM 16.0
GTEX-XBED-1326-SM-4AT4F 15.0
GTEX-WWTW-1326-SM-4MVNT 13.2
GTEX-ZYVF-1026-SM-5E44V 10.6
GTEX-ZZPU-0326-SM-5N9BJ 7.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

5.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 5.7
FF:10010-101C1 65,65,76 years, mixed 5.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.