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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:158.1TPM
GTEx:74.5RPKM
FANTOM5:66.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA008297

 

Antibody HPA025922

 

Antibody CAB019277

 

Adipocytes

Not detected   Not detected   Medium  

Glandular cells

Medium   Medium   High  

Myoepithelial cells

Medium   Medium   Medium  
     
     

BREAST - HPA RNA-seq

Average TPM

158.1

overview Female, age 52
Sample 1
TPM: 111.8
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 128.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 218.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 173.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

74.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 74.5
Samples: 214

Max RPKM: 138.6
Min RPKM: 36.8
Std RPKM: 18.3
Median RPKM: 71.7
GTEX-14ABY-2126-SM-5QGQZ 138.6
GTEX-11TT1-2126-SM-5GU5Y 137.7
GTEX-XYKS-1326-SM-4BRUN 129.9
GTEX-13S86-1226-SM-5S2OA 129.4
GTEX-ZY6K-1626-SM-5GZWV 125.5
GTEX-145LT-0726-SM-5S2VM 116.7
GTEX-ZTTD-1026-SM-51MRD 116.4
GTEX-X4XY-0926-SM-4E3JD 115.9
GTEX-132AR-0826-SM-5EGK6 114.4
GTEX-T5JW-2026-SM-4DM63 113.5
GTEX-VUSG-2226-SM-4KKZO 112.1
GTEX-146FH-0826-SM-5SI8T 109.8
GTEX-QEG5-0726-SM-4R1JQ 108.5
GTEX-1211K-1926-SM-5EQLB 106.1
GTEX-13O3O-0826-SM-5K7WE 105.7
GTEX-RUSQ-2026-SM-4GIAK 103.1
GTEX-XUZC-1626-SM-4BRVP 102.0
GTEX-SIU7-1626-SM-4BRUK 100.6
GTEX-QEL4-2126-SM-447AE 100.5
GTEX-13W3W-1226-SM-5LU4H 100.0
GTEX-11TUW-1826-SM-5BC5D 99.9
GTEX-13NZ9-1026-SM-5MR5K 99.6
GTEX-ZVT2-1826-SM-5NQ8W 99.4
GTEX-Y114-2026-SM-4TT7L 98.2
GTEX-13NZB-2126-SM-5MR4Y 97.5
GTEX-VJWN-0726-SM-3GIJ8 96.4
GTEX-TKQ1-0226-SM-33HB5 94.5
GTEX-ZTX8-1226-SM-4YCE9 93.6
GTEX-QDT8-0626-SM-48TYW 93.2
GTEX-WY7C-2726-SM-3NB3P 92.8
GTEX-11PRG-0826-SM-5EQ6A 92.0
GTEX-131YS-0626-SM-5EGKL 91.7
GTEX-Y5V6-2126-SM-4WWFX 90.2
GTEX-U8XE-0826-SM-4E3J1 90.1
GTEX-13CF3-2126-SM-5IFJP 89.9
GTEX-147F4-2826-SM-5NQBN 89.9
GTEX-11P7K-0726-SM-5EGKX 89.6
GTEX-ZF29-1926-SM-5S2P1 88.5
GTEX-13QIC-2326-SM-5LU5N 88.4
GTEX-13FHO-0826-SM-5L3E8 88.3
GTEX-T6MN-0726-SM-32PML 88.1
GTEX-13OW5-2226-SM-5L3HC 87.7
GTEX-14AS3-1626-SM-5S2OY 87.2
GTEX-ZAJG-0626-SM-5HL8X 87.2
GTEX-SE5C-2126-SM-4BRUJ 86.8
GTEX-S33H-0326-SM-4AD6N 86.7
GTEX-12WSN-1326-SM-5GCNT 86.3
GTEX-11EMC-2026-SM-5A5JV 85.9
GTEX-1122O-1226-SM-5H113 85.8
GTEX-13O3P-0826-SM-5L3DH 85.2
GTEX-13O3Q-2226-SM-5KM4O 85.2
GTEX-Y3IK-2326-SM-4WWDT 84.8
GTEX-XBED-1626-SM-47JYN 84.7
GTEX-111YS-1926-SM-5GICC 84.0
GTEX-13NZ8-0126-SM-5IJCT 83.9
GTEX-XUJ4-1926-SM-4BOOV 83.8
GTEX-ZV7C-1826-SM-5NQ83 83.8
GTEX-WXYG-2226-SM-4E3IM 83.7
GTEX-133LE-1726-SM-5K7VQ 83.1
GTEX-S341-1526-SM-4AD6K 83.0
GTEX-11GS4-2126-SM-5A5KR 82.9
GTEX-U3ZH-1426-SM-4DXSR 82.8
GTEX-ZU9S-1926-SM-5NQBP 82.8
GTEX-XOT4-0726-SM-4GIAW 82.4
GTEX-S32W-2026-SM-4AD6E 82.2
GTEX-ZZPU-0626-SM-5E43T 82.0
GTEX-WYBS-0926-SM-3NM94 81.4
GTEX-13113-1726-SM-5GCOO 81.3
GTEX-13CF2-2026-SM-5K7VI 80.8
GTEX-1399U-1826-SM-5PNZ1 80.1
GTEX-ZLV1-1426-SM-4WWES 79.9
GTEX-ZYWO-2326-SM-5GZY4 79.9
GTEX-X261-0626-SM-3NMD9 79.4
GTEX-13N11-1726-SM-5J1OJ 78.6
GTEX-R55F-1726-SM-2TF4R 77.8
GTEX-R3RS-0626-SM-48FE1 77.4
GTEX-14E6E-1326-SM-5S2NR 77.2
GTEX-ZC5H-2626-SM-5J2MG 77.1
GTEX-ZF2S-2026-SM-5E461 77.0
GTEX-ZDYS-1126-SM-5K7UB 76.7
GTEX-T5JC-2126-SM-32PMO 76.6
GTEX-Y3I4-1526-SM-4TT7K 75.7
GTEX-11WQC-1726-SM-5GU4W 75.5
GTEX-WI4N-1426-SM-3LK7H 75.5
GTEX-WFON-1826-SM-3GILG 75.3
GTEX-117YX-1426-SM-5H12H 75.2
GTEX-X15G-1626-SM-3NMB3 75.0
GTEX-11EQ9-1826-SM-5Q5AJ 74.6
GTEX-11P81-1926-SM-5BC53 74.5
GTEX-11ZTT-2326-SM-5EQLG 74.2
GTEX-WOFL-0826-SM-3MJG1 74.0
GTEX-YEC3-1026-SM-5IFI5 73.8
GTEX-11DZ1-0326-SM-5N9BN 73.6
GTEX-S4Q7-1126-SM-4AD6R 73.6
GTEX-XV7Q-2326-SM-4BRVZ 73.6
GTEX-11DXW-0626-SM-5N9ER 73.5
GTEX-REY6-2426-SM-48FF5 73.5
GTEX-11EM3-1326-SM-5N9C6 73.3
GTEX-11O72-2126-SM-5N9FO 73.2
GTEX-13D11-1026-SM-5IJFB 73.2
GTEX-T2IS-1526-SM-32QPR 73.2
GTEX-TMMY-0726-SM-33HBE 73.1
GTEX-ZVE2-1226-SM-5NQ8R 72.5
GTEX-ZPIC-1126-SM-5BC7F 72.3
GTEX-ZVT4-1026-SM-57WC4 72.3
GTEX-UJHI-1426-SM-3DB9C 72.0
GTEX-139T6-1626-SM-5PNYZ 71.8
GTEX-1117F-2826-SM-5GZXL 71.6
GTEX-139TU-0626-SM-5KM3X 71.6
GTEX-131XW-0726-SM-5EGK3 71.5
GTEX-ZXES-0826-SM-5E43C 71.2
GTEX-WYJK-1326-SM-3NB2T 71.0
GTEX-WRHU-0326-SM-3MJFY 70.9
GTEX-132NY-0826-SM-5K7Y7 70.8
GTEX-13FTY-2226-SM-5J1ND 70.7
GTEX-1313W-0826-SM-5EQ4T 70.5
GTEX-Y5LM-1726-SM-4VDSX 70.5
GTEX-S4P3-1326-SM-4AD6V 70.4
GTEX-ZVTK-0326-SM-51MRR 70.3
GTEX-RWS6-1926-SM-47JXY 69.8
GTEX-11LCK-2426-SM-5HL5F 69.7
GTEX-ZF3C-2326-SM-5S2MZ 69.5
GTEX-13PL6-2926-SM-5L3I2 69.2
GTEX-Q2AG-0326-SM-48U1O 68.8
GTEX-13FTW-1426-SM-5LZWZ 68.7
GTEX-145MO-0826-SM-5NQBL 68.7
GTEX-YFC4-1426-SM-5IFJG 68.6
GTEX-13O61-1826-SM-5KM4I 68.4
GTEX-12ZZX-1126-SM-5EGKB 68.1
GTEX-ZDTT-2126-SM-5S2OJ 68.0
GTEX-11WQK-2426-SM-5GU5C 67.8
GTEX-U412-1826-SM-4DXTJ 67.8
GTEX-ZV6S-1826-SM-5NQ8D 67.8
GTEX-ZVZQ-0826-SM-51MRF 67.3
GTEX-X4EP-2926-SM-3P5YQ 67.1
GTEX-145MN-1926-SM-5SIAI 67.0
GTEX-11P82-1326-SM-5HL62 66.9
GTEX-WYVS-1726-SM-3NMAY 66.9
GTEX-11ONC-2126-SM-5HL6E 66.6
GTEX-1314G-1226-SM-5BC6D 66.0
GTEX-ZWKS-2826-SM-5NQ74 65.8
GTEX-ZLFU-2126-SM-4WWEV 65.1
GTEX-12BJ1-1826-SM-5HL9N 64.9
GTEX-UPK5-2326-SM-3P5Z8 64.6
GTEX-YB5K-1626-SM-5IFIN 64.5
GTEX-Y5V5-2126-SM-4WWFO 64.4
GTEX-Y8LW-1626-SM-5IFHX 64.3
GTEX-ZDXO-0126-SM-5S2ND 63.8
GTEX-ZQG8-0726-SM-5P9H9 63.8
GTEX-11I78-2226-SM-5PNYA 63.5
GTEX-XUW1-2326-SM-4BOO5 63.5
GTEX-1192X-2326-SM-5987X 63.4
GTEX-TKQ2-1826-SM-33HB2 63.4
GTEX-1269C-2426-SM-5FQSN 63.2
GTEX-YFCO-1826-SM-4W1YH 63.2
GTEX-139T8-0826-SM-5L3DE 63.0
GTEX-YJ8O-2226-SM-5IFHW 62.9
GTEX-11NSD-0926-SM-5N9DR 62.2
GTEX-12WSK-2226-SM-5GCO5 62.0
GTEX-ZYW4-0826-SM-5GIDG 61.9
GTEX-13PVQ-1026-SM-5KM3M 61.7
GTEX-145ME-1526-SM-5Q5F2 61.5
GTEX-12WSM-1726-SM-5BC6J 61.3
GTEX-XMD2-0926-SM-4WWEF 61.3
GTEX-Y111-2026-SM-4SOJA 61.2
GTEX-RU72-0626-SM-46MUI 60.8
GTEX-13N1W-0626-SM-5MR4U 60.7
GTEX-ZT9W-2026-SM-51MRA 60.7
GTEX-144GM-0926-SM-5O994 60.5
GTEX-Y8E4-1626-SM-5S2MW 59.9
GTEX-11ZUS-0826-SM-5FQUY 59.5
GTEX-T6MO-0326-SM-32QOK 59.2
GTEX-TML8-1226-SM-32QON 59.0
GTEX-U3ZN-1926-SM-4DXSG 58.7
GTEX-11NV4-2026-SM-5N9DG 58.4
GTEX-ZA64-1526-SM-5CVMD 58.2
GTEX-ZYFC-0826-SM-5E44K 58.0
GTEX-ZAB4-2526-SM-5HL8M 57.9
GTEX-ZEX8-2226-SM-57WC6 57.7
GTEX-13FTX-1126-SM-5N9EN 57.4
GTEX-T2YK-2226-SM-32QPT 57.2
GTEX-11DXY-2326-SM-5GICW 57.0
GTEX-R53T-1526-SM-48FEK 56.8
GTEX-S4UY-0726-SM-4AD6X 56.5
GTEX-11EI6-0626-SM-5985T 55.5
GTEX-R55D-0826-SM-48FEA 55.5
GTEX-144GL-2026-SM-5LU3O 55.4
GTEX-13W46-0826-SM-5LU3H 54.8
GTEX-ZZ64-1226-SM-5E43R 54.8
GTEX-QMRM-1626-SM-4R1KV 54.6
GTEX-11OF3-1926-SM-59889 54.5
GTEX-XMD1-0826-SM-4AT52 54.5
GTEX-S7SE-0826-SM-4AT4D 54.4
GTEX-PSDG-1626-SM-48TCQ 54.2
GTEX-W5X1-2326-SM-3GIL6 54.1
GTEX-Y9LG-1426-SM-5IFJZ 54.0
GTEX-13OW8-0226-SM-5K7UP 53.9
GTEX-XQ3S-1326-SM-4BOPQ 53.8
GTEX-XGQ4-0926-SM-4AT4U 52.8
GTEX-14753-2426-SM-5LU8U 51.7
GTEX-11GSO-1926-SM-5A5K3 50.5
GTEX-YB5E-1726-SM-5IFJ3 50.1
GTEX-ZQUD-1926-SM-51MSA 49.8
GTEX-XQ8I-2426-SM-4WAXY 49.5
GTEX-QVJO-1826-SM-447C9 48.7
GTEX-ZUA1-1526-SM-59HLS 48.4
GTEX-ZYT6-0126-SM-5E45J 48.2
GTEX-12WSB-0626-SM-59HJO 47.3
GTEX-12KS4-0126-SM-5Q5A5 45.9
GTEX-UTHO-1026-SM-3GAF7 45.2
GTEX-11DXZ-1926-SM-5GZZL 43.5
GTEX-117XS-1926-SM-5GICO 43.1
GTEX-132Q8-1426-SM-5EGK7 39.5
GTEX-XMK1-1126-SM-4IHJ8 36.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

66.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 66.9
FF:10080-102A8 77 years, female 66.9

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