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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:95.9TPM
GTEx:68.4RPKM
FANTOM5:80.5Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA008297

 

Antibody HPA025922

 

Antibody CAB019277

 

Squamous epithelial cells

Medium   Medium   High  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

95.9

overview Female, age 70
Sample 1
TPM: 93.8
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 98.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 95.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

68.4

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 68.4
Samples: 286

Max RPKM: 133.2
Min RPKM: 29
Std RPKM: 16.9
Median RPKM: 67.3
GTEX-RUSQ-0826-SM-47JWW 133.2
GTEX-XGQ4-1526-SM-4AT6H 121.4
GTEX-TMMY-1126-SM-4DXSX 120.4
GTEX-ZTX8-0226-SM-5E44D 111.8
GTEX-13X6H-1326-SM-5LU42 108.0
GTEX-145ME-0526-SM-5QGQV 107.3
GTEX-S32W-0926-SM-4AD5X 106.0
GTEX-13CF3-1626-SM-5IFG9 105.7
GTEX-ZT9X-0526-SM-5GCOP 103.8
GTEX-11LCK-1726-SM-5S2OQ 102.7
GTEX-133LE-0626-SM-5IFFJ 99.7
GTEX-WFJO-0826-SM-4LVM5 99.6
GTEX-QDVJ-0726-SM-48U1W 98.5
GTEX-12WSL-1526-SM-5GCP8 98.4
GTEX-146FQ-1026-SM-5LU8I 98.3
GTEX-ZAB5-0926-SM-5CVMV 97.3
GTEX-13FH7-0526-SM-5IJF8 95.9
GTEX-11TT1-0526-SM-5P9JO 95.5
GTEX-RU1J-0326-SM-46MUM 95.0
GTEX-11DXX-1126-SM-5GZZK 94.4
GTEX-13X6I-1026-SM-5LU4C 92.9
GTEX-144GN-0626-SM-5O9B2 92.1
GTEX-Y3I4-1226-SM-4TT8N 91.1
GTEX-P4QS-0626-SM-3NMD1 90.5
GTEX-R55D-1126-SM-48FEB 90.4
GTEX-14BMU-0926-SM-5S2QB 90.0
GTEX-111YS-0926-SM-5EGGI 89.6
GTEX-XMK1-1326-SM-4B65Q 89.2
GTEX-13S86-0826-SM-5SI6J 88.5
GTEX-VJYA-0726-SM-4KL1T 88.3
GTEX-146FR-0426-SM-5SI97 88.2
GTEX-ZPU1-1426-SM-4WWFU 88.0
GTEX-ZXES-1126-SM-5GZXN 87.9
GTEX-S3XE-0926-SM-4AD4S 87.5
GTEX-131XF-0826-SM-5GICG 87.4
GTEX-OXRL-0626-SM-3NM9C 86.8
GTEX-145MN-1026-SM-5NQ9G 86.6
GTEX-14ICL-0526-SM-5RQJ6 86.6
GTEX-11EM3-0826-SM-5N9CC 86.3
GTEX-13U4I-1126-SM-5LU3S 86.3
GTEX-U3ZH-1026-SM-4DXUZ 86.3
GTEX-X15G-0826-SM-4PQZD 86.0
GTEX-144GO-2726-SM-5O9A2 85.9
GTEX-S4P3-0426-SM-4AD56 85.6
GTEX-ZGAY-1126-SM-4WWBS 85.4
GTEX-11NSD-1126-SM-5N9BQ 85.3
GTEX-146FH-1726-SM-5QGQ2 85.0
GTEX-PSDG-1326-SM-48TD2 84.9
GTEX-13O21-0626-SM-5IJDI 84.4
GTEX-ZYWO-1026-SM-5E45U 84.1
GTEX-1399U-1026-SM-5J1OC 83.6
GTEX-V955-1126-SM-4JBH3 83.5
GTEX-ZDYS-0826-SM-4WWCR 83.3
GTEX-Y8E4-1726-SM-5LU9G 83.1
GTEX-13111-0826-SM-5LZV3 82.9
GTEX-132QS-1426-SM-5P9GE 82.9
GTEX-Q2AI-0626-SM-48TZU 82.5
GTEX-T5JW-1326-SM-4DM5G 82.4
GTEX-13W3W-1626-SM-5LU35 82.1
GTEX-WFG7-1126-SM-4LMK3 81.9
GTEX-OXRK-1326-SM-3NB1A 80.6
GTEX-ZYFG-1126-SM-5GICY 80.6
GTEX-ZY6K-0626-SM-59HJL 80.5
GTEX-QDVN-1026-SM-48TZA 80.2
GTEX-QESD-0826-SM-47J4G 80.2
GTEX-14E6E-0726-SM-5S2R3 80.1
GTEX-RM2N-0726-SM-48FD5 80.1
GTEX-UJHI-0826-SM-4IHLM 80.0
GTEX-WFG8-1226-SM-4V6EI 80.0
GTEX-U4B1-0826-SM-4DXTW 79.6
GTEX-SUCS-0726-SM-4DM7J 79.3
GTEX-11EMC-2226-SM-5A5JW 78.7
GTEX-XYKS-1526-SM-4BRUP 78.7
GTEX-S7SF-0926-SM-4AD4M 78.6
GTEX-RU72-0726-SM-46MUW 78.3
GTEX-Y5V6-1026-SM-4VBS2 78.0
GTEX-139YR-1726-SM-5IFFK 77.9
GTEX-TKQ1-0326-SM-4DXSM 77.9
GTEX-YF7O-0926-SM-5IFIF 77.5
GTEX-NPJ8-1926-SM-3MJGB 77.4
GTEX-W5WG-1626-SM-4LMKG 77.4
GTEX-144GM-1426-SM-5LU31 77.3
GTEX-SNOS-0626-SM-4DM5F 77.2
GTEX-QEL4-1426-SM-447AC 77.1
GTEX-WOFM-0626-SM-4OOS3 76.6
GTEX-S341-0526-SM-4AD5U 75.9
GTEX-Y114-0926-SM-4TT7J 75.8
GTEX-WRHK-0526-SM-4MVOF 75.7
GTEX-SNMC-0526-SM-4DM69 75.6
GTEX-ZZ64-0226-SM-5E44X 75.5
GTEX-11I78-1526-SM-5A5K7 75.3
GTEX-REY6-1326-SM-48FDO 74.9
GTEX-TSE9-1226-SM-4DXTM 74.6
GTEX-11P81-0826-SM-5P9GR 74.5
GTEX-139T6-0626-SM-5IFF9 74.5
GTEX-QLQ7-0926-SM-447BC 74.5
GTEX-Q2AH-0826-SM-48TZN 74.3
GTEX-XV7Q-1126-SM-4BRVS 74.2
GTEX-U3ZN-1726-SM-4DXUQ 73.5
GTEX-XBED-1026-SM-48TCB 73.5
GTEX-XXEK-0326-SM-4BRVV 73.5
GTEX-ZTPG-1626-SM-5DUX2 73.4
GTEX-QEG5-1426-SM-447AS 73.1
GTEX-ZF2S-1226-SM-4WWAX 73.0
GTEX-Y8LW-0726-SM-5IFI1 72.9
GTEX-11DYG-1326-SM-5N9DO 72.8
GTEX-ZA64-0626-SM-5HL9O 72.8
GTEX-OOBK-0625-SM-3LK5P 72.7
GTEX-YEC3-2526-SM-4YCDN 72.4
GTEX-V1D1-1026-SM-4JBHE 72.3
GTEX-132AR-2226-SM-5J2NT 72.2
GTEX-T8EM-0526-SM-4DM64 71.7
GTEX-Y5V5-1626-SM-4VDSG 71.6
GTEX-WEY5-0926-SM-4LMI4 71.3
GTEX-XUJ4-1026-SM-4BOPB 71.3
GTEX-1211K-0926-SM-5FQTL 71.1
GTEX-131XE-1426-SM-5HL7V 71.0
GTEX-139UW-1126-SM-5IJEJ 70.9
GTEX-13FTW-1626-SM-5KM4N 70.9
GTEX-U8XE-1726-SM-4E3IF 70.9
GTEX-WFON-0826-SM-4LVMI 70.9
GTEX-13RTK-0526-SM-5S2QF 70.4
GTEX-QCQG-0626-SM-48U21 70.3
GTEX-111CU-0726-SM-5GZYD 70.2
GTEX-13D11-1926-SM-5IFGB 70.1
GTEX-P4PQ-0626-SM-3NMCU 70.1
GTEX-Y5LM-1026-SM-4VDSQ 70.0
GTEX-QLQW-0526-SM-4R1KS 69.8
GTEX-13PVR-1826-SM-5Q5CC 69.6
GTEX-R53T-1126-SM-48FD4 69.5
GTEX-R3RS-1326-SM-48FE7 69.4
GTEX-ZAB4-1126-SM-5HL86 69.2
GTEX-145LT-1126-SM-5LUA1 68.9
GTEX-145MF-1426-SM-5O9B6 68.7
GTEX-13OVG-0626-SM-5IFEP 68.6
GTEX-SE5C-1226-SM-4BRWV 68.2
GTEX-T6MO-0526-SM-4DM6R 67.8
GTEX-13OVI-2626-SM-5KM4T 67.7
GTEX-NFK9-1126-SM-3LK78 67.6
GTEX-S33H-0826-SM-4AD5Y 67.6
GTEX-12C56-1226-SM-5FQSU 67.5
GTEX-OIZH-0626-SM-3NB1L 67.4
GTEX-X4LF-0626-SM-4QASB 67.4
GTEX-PLZ5-0926-SM-3TW8L 67.3
GTEX-QV44-1126-SM-4R1KO 67.2
GTEX-XLM4-2326-SM-4TT2D 67.2
GTEX-1399S-1326-SM-5P9GH 66.9
GTEX-13O1R-1326-SM-5IJF5 66.9
GTEX-13QBU-1026-SM-5LU3R 66.9
GTEX-14C38-2126-SM-5RQJO 66.9
GTEX-RNOR-1226-SM-48FDQ 66.8
GTEX-WQUQ-1626-SM-4OOSH 66.8
GTEX-UJMC-0926-SM-4IHLK 66.6
GTEX-ZVE2-1326-SM-5NQ94 66.6
GTEX-12WSK-1126-SM-5LZV8 66.4
GTEX-P78B-1026-SM-3NMC4 66.2
GTEX-13PVQ-1726-SM-5IFF3 66.0
GTEX-12WSD-1826-SM-5GCOA 65.6
GTEX-RWS6-0826-SM-47JXF 65.3
GTEX-ZF29-1326-SM-4WWB6 65.3
GTEX-1497J-2726-SM-5SI9W 65.0
GTEX-11EQ9-0726-SM-5A5K2 64.9
GTEX-11XUK-0826-SM-5GU6P 64.9
GTEX-Z9EW-0526-SM-5HL8S 64.9
GTEX-131XG-1026-SM-5GCMX 64.8
GTEX-WH7G-0926-SM-4LVMJ 64.8
GTEX-ZVT2-1326-SM-5E45H 64.8
GTEX-11P82-0526-SM-5986P 64.6
GTEX-11VI4-0526-SM-5EQ48 64.4
GTEX-PWN1-0626-SM-48TDT 64.4
GTEX-12WSA-1426-SM-5EGJU 64.3
GTEX-PWCY-0726-SM-48TCS 64.2
GTEX-XUZC-0426-SM-4BOPE 64.2
GTEX-YFC4-1226-SM-5LU9R 64.1
GTEX-145MO-1426-SM-5Q5BS 64.0
GTEX-11DZ1-2026-SM-5A5KG 63.9
GTEX-ZYY3-1526-SM-5SIA9 63.7
GTEX-12KS4-0926-SM-5BC5S 63.5
GTEX-X3Y1-1326-SM-4PQZB 63.2
GTEX-Y111-1626-SM-57WCY 63.2
GTEX-VUSG-1226-SM-4KKZF 63.1
GTEX-11DXZ-1226-SM-5H11L 63.0
GTEX-145LV-1326-SM-5S2QI 62.9
GTEX-13FTX-0526-SM-5IFGS 62.8
GTEX-ZYVF-2226-SM-5GIDD 62.3
GTEX-UPIC-1026-SM-4IHLT 62.2
GTEX-147F3-0826-SM-5NQA7 62.0
GTEX-ZVP2-1326-SM-57WCE 62.0
GTEX-XBEW-1326-SM-4AT63 61.6
GTEX-14H4A-1626-SM-5SI69 61.5
GTEX-13X6K-2126-SM-5O9D4 60.9
GTEX-ZG7Y-1126-SM-4WWEZ 60.9
GTEX-R55C-0826-SM-48FCL 60.6
GTEX-1122O-1726-SM-5GICM 60.2
GTEX-OIZI-1426-SM-3NB1T 60.0
GTEX-11P7K-1326-SM-5BC5G 59.9
GTEX-O5YV-1026-SM-3LK72 59.6
GTEX-YB5E-0926-SM-4WWDQ 59.6
GTEX-13OVJ-1226-SM-5L3HA 59.4
GTEX-TML8-1526-SM-4DXUX 59.1
GTEX-144FL-2726-SM-5O98Z 58.9
GTEX-UPK5-1226-SM-4IHL8 58.4
GTEX-ZQUD-0426-SM-57WFR 58.4
GTEX-14E1K-1226-SM-5S2PD 58.2
GTEX-P4PP-0626-SM-3NM9X 58.2
GTEX-X4EO-1226-SM-4QARR 58.2
GTEX-13G51-0926-SM-5IFFU 58.1
GTEX-U3ZM-0526-SM-4DXTB 57.5
GTEX-OIZG-1026-SM-3LK5X 57.3
GTEX-Y3IK-1126-SM-51MSV 57.2
GTEX-P4QT-0626-SM-3NMCP 57.0
GTEX-T2IS-0826-SM-4DM6L 57.0
GTEX-ZF3C-1626-SM-4WWB4 57.0
GTEX-14AS3-0626-SM-5QGQD 56.8
GTEX-ZTSS-0626-SM-59867 56.5
GTEX-R55G-1026-SM-48FDI 56.3
GTEX-R45C-1226-SM-48FEE 56.1
GTEX-RTLS-1126-SM-46MUQ 56.0
GTEX-Y9LG-0626-SM-4WWDH 55.9
GTEX-1212Z-2126-SM-5FQTM 55.8
GTEX-12BJ1-1626-SM-5HL8Y 55.7
GTEX-1399R-0826-SM-5IJEL 55.5
GTEX-ZYW4-1326-SM-5E45N 55.5
GTEX-117YX-1626-SM-5GZZG 55.4
GTEX-ZZPT-1426-SM-5N9C5 55.4
GTEX-R55E-1326-SM-48FCR 55.1
GTEX-S4Q7-0626-SM-4AD5M 55.0
GTEX-XOTO-2126-SM-4B64U 55.0
GTEX-PVOW-1626-SM-48TC9 54.9
GTEX-11DXY-1426-SM-5N9CN 54.8
GTEX-S95S-0426-SM-4B64I 54.5
GTEX-ZT9W-1326-SM-51MTB 54.5
GTEX-XQ3S-1126-SM-4BOPK 54.3
GTEX-145LS-1826-SM-5LUAZ 53.7
GTEX-12ZZX-1326-SM-5DUWI 53.3
GTEX-XQ8I-1526-SM-4BOOH 53.3
GTEX-XK95-1026-SM-4GIDV 53.1
GTEX-13FHO-1726-SM-5IFGM 52.7
GTEX-ZPCL-1426-SM-57WEC 52.4
GTEX-12696-1326-SM-5FQTJ 52.1
GTEX-T5JC-1726-SM-4DM6U 51.8
GTEX-ZLV1-0526-SM-4WWD4 51.8
GTEX-12ZZW-1726-SM-5DUVD 51.3
GTEX-N7MT-0326-SM-48TDP 50.9
GTEX-11NUK-1326-SM-5P9GN 50.7
GTEX-11ZTS-2626-SM-5EGIC 50.7
GTEX-132Q8-1826-SM-5EGIY 50.6
GTEX-X585-1226-SM-46MW7 50.1
GTEX-131YS-1426-SM-5IJF7 49.8
GTEX-PLZ4-1626-SM-3P618 48.8
GTEX-13FLV-1126-SM-5J2NO 48.5
GTEX-1399Q-1126-SM-5P9JA 48.1
GTEX-139TU-1226-SM-5J2NL 47.9
GTEX-QVUS-0626-SM-447CC 47.9
GTEX-PLZ6-0526-SM-3P61C 47.7
GTEX-QEG4-0726-SM-4R1JL 47.7
GTEX-13O3Q-0826-SM-5IFGF 46.6
GTEX-11TUW-1326-SM-5EQKV 46.3
GTEX-14DAQ-1426-SM-5RQJD 46.3
GTEX-14BIN-2726-SM-5RQIE 46.2
GTEX-ZE9C-1126-SM-4WWBD 46.0
GTEX-ZUA1-1226-SM-5NQ6O 46.0
GTEX-ZYT6-1126-SM-5GZYR 45.9
GTEX-ZC5H-1326-SM-5HL7E 45.7
GTEX-13NZB-1226-SM-5J2MW 45.5
GTEX-11GSP-1826-SM-5N9DQ 45.3
GTEX-XMD2-1326-SM-4YCET 45.2
GTEX-WK11-1026-SM-4OOS8 45.1
GTEX-11ZU8-1526-SM-5EGHX 45.0
GTEX-YECK-1626-SM-5IFHQ 44.0
GTEX-11ONC-1526-SM-5GU6S 43.6
GTEX-12ZZY-1426-SM-5N9EI 42.0
GTEX-148VJ-1026-SM-5LU98 41.3
GTEX-WVLH-1426-SM-4MVNX 40.4
GTEX-13OW8-2326-SM-5L3I9 40.1
GTEX-13W46-1926-SM-5J2MF 38.8
GTEX-YJ89-1526-SM-5P9IR 38.3
GTEX-RN64-1026-SM-48FDX 36.9
GTEX-13QJ3-1726-SM-5RQK9 36.6
GTEX-RVPV-0526-SM-47JYL 36.3
GTEX-X62O-2226-SM-46MW3 34.9
GTEX-117YW-1926-SM-5H121 34.6
GTEX-X4XY-1726-SM-46MVO 33.8
GTEX-OXRP-0926-SM-48TC1 31.1
GTEX-OXRN-1726-SM-3NM9B 29.5
GTEX-14A6H-1326-SM-5NQBC 29.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

80.5

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 80.5
FF:10015-101C6 68,74,75 years, mixed 80.5

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