We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RPN2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:111.7TPM
GTEx:72.2RPKM
FANTOM5:138.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA008297

 

Antibody HPA025922

 

Antibody CAB019277

 

Glandular cells

High   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

111.7

overview Male, age 65
Sample 1
TPM: 103.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 114.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 118.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 110.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

72.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 72.2
Samples: 88

Max RPKM: 137.3
Min RPKM: 38.3
Std RPKM: 17.1
Median RPKM: 70.4
GTEX-WFG8-1626-SM-4LVMB 137.3
GTEX-XGQ4-1326-SM-4GIDU 121.1
GTEX-13RTK-0826-SM-5Q5C6 112.8
GTEX-131XG-1726-SM-5LZUR 112.0
GTEX-Y5LM-1626-SM-4VDTB 104.7
GTEX-VJYA-0926-SM-4KL1N 101.5
GTEX-13FTW-2026-SM-5IJE2 99.5
GTEX-139YR-2226-SM-5IFFW 94.9
GTEX-ZYFG-2026-SM-5E43Y 94.1
GTEX-ZVT2-2126-SM-5NQ93 92.9
GTEX-133LE-1426-SM-5IFH1 92.5
GTEX-ZP4G-1626-SM-57WGD 91.3
GTEX-145LT-1026-SM-5LU9O 86.7
GTEX-XAJ8-0526-SM-47JYK 85.2
GTEX-111CU-1326-SM-5NQ8L 83.7
GTEX-13D11-0726-SM-5LZZB 83.7
GTEX-131XF-1326-SM-5GCMQ 83.4
GTEX-ZVP2-1726-SM-5GU5P 83.4
GTEX-UPK5-2026-SM-4JBIM 83.4
GTEX-XBED-1426-SM-4AT4G 83.4
GTEX-ZLV1-1126-SM-4WWBW 82.1
GTEX-ZYWO-1526-SM-5SIAL 81.9
GTEX-ZQG8-2526-SM-57WEQ 81.3
GTEX-ZPIC-2326-SM-57WDW 80.3
GTEX-X15G-1426-SM-4PQZK 80.2
GTEX-Z9EW-0926-SM-5CVMM 79.9
GTEX-11NSD-1726-SM-5N9C3 79.4
GTEX-11EQ9-1326-SM-5985X 78.5
GTEX-11P82-0826-SM-5P9GU 76.8
GTEX-ZXES-1526-SM-5NQ95 76.3
GTEX-11DXX-1626-SM-5H11H 75.5
GTEX-ZA64-1226-SM-5HL7B 74.9
GTEX-YB5E-1526-SM-5IFIE 74.3
GTEX-ZTX8-0526-SM-59HLD 73.4
GTEX-ZTPG-2626-SM-57WFX 73.1
GTEX-145ME-0926-SM-5O9AR 72.6
GTEX-14DAR-1426-SM-5RQIR 72.2
GTEX-13113-1226-SM-5EGHT 72.1
GTEX-XUZC-1426-SM-4BRV3 71.6
GTEX-WRHK-1026-SM-4MVOD 71.5
GTEX-WFJO-0926-SM-4LVM2 71.3
GTEX-13O61-1326-SM-5KM31 71.2
GTEX-Y3IK-1726-SM-4YCCR 70.7
GTEX-11P7K-1626-SM-5GU63 70.6
GTEX-139T6-1026-SM-5IJGC 70.3
GTEX-VUSG-1726-SM-4KKZL 69.9
GTEX-ZEX8-1826-SM-57WBH 69.4
GTEX-ZZ64-0526-SM-5GZXM 69.3
GTEX-WH7G-1626-SM-4LVMY 68.4
GTEX-ZPCL-1726-SM-57WEO 67.8
GTEX-11VI4-1626-SM-5EQKO 67.4
GTEX-XXEK-1026-SM-4BRUW 66.6
GTEX-13111-1426-SM-5DUW3 66.3
GTEX-117YX-0326-SM-5GICL 65.5
GTEX-YEC4-1726-SM-4W21E 64.1
GTEX-1399U-2126-SM-5IFEZ 63.3
GTEX-13O21-1026-SM-5IJDU 63.0
GTEX-11XUK-1426-SM-5EQMG 62.7
GTEX-1192X-2526-SM-59868 62.4
GTEX-111YS-1426-SM-5GID8 62.0
GTEX-13PL7-2626-SM-5IFH4 61.5
GTEX-WEY5-1526-SM-4LMJF 61.4
GTEX-XMK1-1826-SM-4B66F 61.3
GTEX-ZTSS-0926-SM-59865 60.8
GTEX-11I78-1126-SM-5A5K5 60.4
GTEX-1122O-1326-SM-5H11F 60.0
GTEX-ZLFU-1526-SM-4WWBT 59.4
GTEX-13FH7-1226-SM-5IJFK 58.5
GTEX-ZVZP-1826-SM-5GZXB 58.1
GTEX-14E6E-1626-SM-5RQI7 57.9
GTEX-1399R-2026-SM-5K7WN 57.8
GTEX-13CF3-1226-SM-5LZXN 57.8
GTEX-13QBU-1926-SM-5IJEW 57.3
GTEX-12BJ1-1926-SM-5HL9Z 57.1
GTEX-WFG7-1726-SM-4LVME 56.8
GTEX-11DXZ-1326-SM-5H11X 55.7
GTEX-Y114-1426-SM-4TT6W 55.6
GTEX-X5EB-1626-SM-4E3IV 55.3
GTEX-1399S-2026-SM-5KM4B 55.1
GTEX-ZF2S-1726-SM-57WFT 54.6
GTEX-12WSK-1526-SM-5CVNO 52.5
GTEX-WQUQ-2426-SM-4MVNW 51.7
GTEX-Y9LG-1626-SM-5IFHM 51.5
GTEX-YF7O-1826-SM-5IFIU 51.0
GTEX-148VJ-2226-SM-5NQ9M 50.3
GTEX-ZC5H-2326-SM-4WAYT 47.5
GTEX-ZQUD-0926-SM-57WE3 47.2
GTEX-13OVI-1926-SM-5IJCG 38.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

138.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 138.1
FF:10024-101D6 15,40,85 years, mixed 138.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.