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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:122.2RPKM
FANTOM5:350.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 
 

Antibody staining

Antibody HPA027541

 

Antibody CAB002212

 

Glial cells

Not detected   Medium  

Neuronal cells

Low  
      
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

122.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 122.2
Samples: 117

Max RPKM: 775.6
Min RPKM: 5.7
Std RPKM: 137.4
Median RPKM: 77.1
GTEX-X585-0011-R5A-SM-46MVI 775.6
GTEX-13JUV-0011-R5a-SM-5LZY5 730.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 660.0
GTEX-X4XX-0011-R5A-SM-46MWN 534.0
GTEX-12WSA-0011-R5b-SM-5GU5I 478.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 476.9
GTEX-WWYW-0011-R5A-SM-3NB3E 473.9
GTEX-NL4W-0011-R5a-SM-2I3GD 418.5
GTEX-144GO-0011-R5a-SM-5PNUR 320.3
GTEX-T5JC-0011-R5A-SM-32PLK 305.3
GTEX-13X6I-0011-R5a-SM-5PNWW 241.4
GTEX-132Q8-0011-R5a-SM-5IJDM 235.4
GTEX-N7MT-0011-R5a-SM-2I3G6 224.7
GTEX-13OW5-0011-R5b-SM-5L3FR 202.8
GTEX-WL46-0011-R5A-SM-3LK6V 201.6
GTEX-RVPU-0011-R5A-SM-2XCAD 200.3
GTEX-12WSB-0011-R5b-SM-5GU67 177.5
GTEX-XMD1-0011-R5A-SM-4AT47 173.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 167.1
GTEX-RVPV-0011-R5A-SM-2TF69 167.0
GTEX-QMR6-0011-R5A-SM-32PKT 166.9
GTEX-PVOW-0011-R5A-SM-32PL7 152.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 152.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 150.4
GTEX-13OVH-0011-R5b-SM-5KM4L 145.4
GTEX-N7MS-0011-R5a-SM-2HMK8 139.3
GTEX-OHPN-0011-R5A-SM-2I5FF 137.6
GTEX-11H98-0011-R5b-SM-57WCF 127.4
GTEX-11NV4-0011-R5a-SM-5NQ88 126.8
GTEX-12WSF-0011-R5a-SM-5HL8K 125.9
GTEX-13NYS-0011-R5a-SM-5MR4D 121.8
GTEX-13X6K-0011-R5b-SM-5PNUE 120.6
GTEX-UTHO-0011-R5A-SM-3GIJD 117.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 114.9
GTEX-NL3H-0011-R5a-SM-2I3GB 114.1
GTEX-WZTO-0011-R5B-SM-3NMC5 114.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 112.2
GTEX-TSE9-0011-R5A-SM-3DB7J 109.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 107.6
GTEX-14BIM-0011-R5b-SM-5S2RM 104.2
GTEX-Z93S-0011-R5b-SM-4RGNI 101.8
GTEX-145LS-0011-R5a-SM-5SI65 98.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 98.6
GTEX-13FLV-0011-R5a-SM-5LZWT 98.3
GTEX-12WSH-0011-R5b-SM-5P9F3 98.1
GTEX-YFC4-0011-R5a-SM-4RGLR 96.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 92.4
GTEX-13NYB-0011-R5a-SM-5MR45 91.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 89.4
GTEX-QVJO-0011-R5A-SM-2S1QM 89.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 89.1
GTEX-131YS-0011-R5b-SM-5K7YB 87.2
GTEX-NPJ7-0011-R5a-SM-33HBK 86.3
GTEX-ZXG5-0011-R5b-SM-57WBN 86.1
GTEX-11WQC-0011-R5a-SM-5BC74 84.2
GTEX-P44H-0011-R5A-SM-2XCEX 83.8
GTEX-ZUA1-0011-R5b-SM-51MTG 80.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 79.1
GTEX-13O3O-0011-R5b-SM-5KM44 77.1
GTEX-13FXS-0011-R5b-SM-5LZYE 76.3
GTEX-R55E-0011-R5A-SM-2TC5N 75.3
GTEX-XOTO-0011-R5A-SM-4B657 73.9
GTEX-11GSP-0011-R5a-SM-57WBE 73.5
GTEX-1477Z-0011-R5b-SM-5PNUO 73.3
GTEX-X261-0011-R5A-SM-3NMB4 72.1
GTEX-WVLH-0011-R5A-SM-3MJFW 70.7
GTEX-139TS-0011-R5b-SM-5J2MZ 68.6
GTEX-13112-0011-R5b-SM-5DUV8 68.5
GTEX-1399T-0011-R5b-SM-5IJDK 68.2
GTEX-13VXU-0011-R5a-SM-5O9D7 67.8
GTEX-13CZV-0011-R5a-SM-5K7XA 66.1
GTEX-11OF3-0011-R5a-SM-57WB4 65.5
GTEX-13OW6-0011-R5a-SM-5O9BK 65.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 62.4
GTEX-13S7M-0011-R5b-SM-5P9HS 62.0
GTEX-12WSC-0011-R5b-SM-5CVNS 61.0
GTEX-14BIN-0011-R5b-SM-5SI78 59.9
GTEX-13G51-0011-R5a-SM-5L3EB 56.8
GTEX-144GL-0011-R5b-SM-5PNUJ 56.2
GTEX-T6MN-0011-R5A-SM-32QPD 56.1
GTEX-12WSD-0011-R5b-SM-5CVNG 56.0
GTEX-13OW7-0011-R5b-SM-5O9DM 54.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 54.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 53.2
GTEX-13SLX-0011-R5a-SM-5O9BV 52.4
GTEX-139TT-0011-R5b-SM-5K7W8 52.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 50.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50.6
GTEX-1313W-0011-R5b-SM-5L3EP 50.5
GTEX-1445S-0011-R5a-SM-5PNUS 50.0
GTEX-RU72-0011-R5A-SM-2TF6U 49.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 49.3
GTEX-13OVL-0011-R5b-SM-5L3FU 48.1
GTEX-S7SE-0011-R5A-SM-2XCDA 47.1
GTEX-13JVG-0011-R5a-SM-5MR4O 45.6
GTEX-T2IS-0011-R5A-SM-32QP4 45.6
GTEX-13FHP-0011-R5b-SM-5LZY2 45.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 45.4
GTEX-13CIG-0011-R5b-SM-5L3F2 44.5
GTEX-145MH-0011-R5a-SM-5P9JT 43.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 41.2
GTEX-OXRN-0011-R5A-SM-2I5EF 40.2
GTEX-13CF2-0011-R5a-SM-5LZWS 40.1
GTEX-13X6J-0011-R5b-SM-5PNWT 36.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 34.7
GTEX-ZE7O-0011-R5a-SM-57WBO 32.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 32.5
GTEX-ZV68-0011-R5a-SM-4YCDW 30.5
GTEX-14ABY-0011-R5b-SM-5SI7B 30.4
GTEX-YJ89-0011-R5a-SM-4V6GM 26.5
GTEX-12ZZX-0011-R5a-SM-5HL89 24.8
GTEX-S7PM-0011-R5A-SM-3NM8G 24.7
GTEX-ZVT3-0011-R5a-SM-51MSI 24.4
GTEX-11UD1-0011-R5b-SM-5P9FP 16.9
GTEX-139T8-0011-R5b-SM-5J1MO 16.8
GTEX-13NZA-0011-R5b-SM-5KM4K 10.9
GTEX-145MG-0011-R5b-SM-5S2VU 5.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

350.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 350.3
FF:10164-103B2 76 years, female 475.2
FF:10379-105H1 89 years, female 225.4

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