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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:797.1TPM
GTEx:90.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA027541

 

Antibody CAB002212

 

Endothelial cells

Not detected   Low  

Glial cells

Not detected   High  

Neuronal cells

Not detected   Medium  

Neuropil

Not detected   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

797.1

N/A Male, age 5
Sample 1
TPM: 176.2
overview Female, age 40
Sample 2
TPM: 357.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1857.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

90.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 59.8
Samples: 114

Max RPKM: 1391.9
Min RPKM: 2.8
Std RPKM: 138.6
Median RPKM: 27.3
GTEX-X585-3026-SM-46MWF 1391.9
GTEX-13NYC-2826-SM-5K7WR 355.8
GTEX-11WQK-3026-SM-5EQL6 300.1
GTEX-11OC5-0726-SM-5P9JK 262.6
GTEX-WWYW-3126-SM-3NB39 203.8
GTEX-N7MT-1126-SM-5SI7V 201.5
GTEX-WHSE-3026-SM-3P5ZH 183.5
GTEX-UTHO-3026-SM-3GAFB 181.5
GTEX-NPJ8-1526-SM-2D7VU 164.2
GTEX-13G51-3026-SM-5IJB8 158.9
GTEX-13OVJ-2826-SM-5L3GW 106.7
GTEX-1192X-3126-SM-5N9BY 105.6
GTEX-13PVQ-3026-SM-5SI93 101.5
GTEX-QVUS-2826-SM-3GADB 100.0
GTEX-12ZZY-3026-SM-5GCOU 86.3
GTEX-11ONC-2926-SM-5P9JM 83.5
GTEX-11GS4-3126-SM-5A5LH 81.8
GTEX-13NYS-3126-SM-5KLYV 70.4
GTEX-1313W-3126-SM-5LZUI 70.0
GTEX-13OVH-3026-SM-5MR4N 67.2
GTEX-111FC-3126-SM-5GZZ2 66.5
GTEX-ZAJG-3126-SM-5HL9J 66.0
GTEX-13NYB-3026-SM-5IJD7 63.4
GTEX-13FLW-1426-SM-5K7YE 62.7
GTEX-13JUV-2926-SM-5LZX7 57.9
GTEX-144FL-3026-SM-5O99C 57.3
GTEX-12WSA-2926-SM-5EQ4D 56.6
GTEX-13FHP-3026-SM-5IJBS 56.5
GTEX-11TTK-2926-SM-5PNYP 56.4
GTEX-NPJ7-2726-SM-2I3FT 55.7
GTEX-13IVO-2926-SM-5L3CZ 55.6
GTEX-WL46-2926-SM-3LK82 51.7
GTEX-ZZPT-3026-SM-5GZXH 51.3
GTEX-R55F-1326-SM-5S2V4 50.8
GTEX-132Q8-3026-SM-5PNVG 47.3
GTEX-13OW8-2826-SM-5L3GC 46.9
GTEX-XOTO-3026-SM-4B65M 45.2
GTEX-YFC4-3126-SM-5PNV6 44.8
GTEX-11DXY-3226-SM-5GIDE 43.1
GTEX-13FHO-3026-SM-5J1O9 41.5
GTEX-QMR6-1426-SM-32PLA 39.6
GTEX-T5JC-2426-SM-3NMDB 39.3
GTEX-11GSP-3226-SM-5986O 37.8
GTEX-11O72-2926-SM-5BC4V 37.1
GTEX-117XS-3026-SM-5N9CA 36.9
GTEX-XLM4-3026-SM-4AT6L 36.4
GTEX-T6MN-2626-SM-32PMQ 35.8
GTEX-PWO3-0926-SM-2I5EY 35.7
GTEX-13QIC-2926-SM-5J2NF 35.6
GTEX-13VXU-2926-SM-5LU5C 33.1
GTEX-1445S-3026-SM-5O9BR 33.0
GTEX-ZYFD-3026-SM-5E44C 32.8
GTEX-12WSH-3026-SM-5CVNI 30.9
GTEX-13X6K-2926-SM-5Q5D5 30.5
GTEX-X4XX-3026-SM-3NMB2 30.2
GTEX-Q2AG-2926-SM-2HMJ3 27.9
GTEX-13OW6-3026-SM-5J2MI 27.4
GTEX-13SLX-3126-SM-5S2Q5 27.2
GTEX-13O3O-3126-SM-5KM3H 26.8
GTEX-QDT8-2926-SM-32PKC 26.4
GTEX-11EI6-3026-SM-5GZZO 25.4
GTEX-12WSD-3126-SM-5HL7P 25.4
GTEX-11GSO-2926-SM-5HL73 25.1
GTEX-1399T-3026-SM-5KLZC 24.9
GTEX-PVOW-2526-SM-2XCF7 23.0
GTEX-RNOR-2326-SM-2TF4I 22.8
GTEX-145LS-3126-SM-5Q5BY 21.9
GTEX-14BMV-3026-SM-5S2PQ 21.6
GTEX-1128S-2726-SM-5H12C 21.5
GTEX-13JVG-3126-SM-5L3FH 21.2
GTEX-QVJO-1426-SM-2S1QY 21.0
GTEX-11NV4-2126-SM-5N9DS 20.8
GTEX-14A5I-2926-SM-5Q5CQ 20.1
GTEX-145MF-2726-SM-5O995 19.9
GTEX-12WSC-3026-SM-5GCNF 18.7
GTEX-12ZZZ-3026-SM-5BC67 17.9
GTEX-131YS-3126-SM-5KLYT 17.7
GTEX-13FXS-3126-SM-5J2NN 17.6
GTEX-WVLH-3026-SM-3MJG9 17.6
GTEX-13S7M-3126-SM-5RQJQ 17.1
GTEX-12126-1026-SM-5P9JJ 16.7
GTEX-11OF3-2926-SM-5HL78 16.4
GTEX-ZAK1-3026-SM-5S2MJ 15.7
GTEX-1117F-3226-SM-5N9CT 15.5
GTEX-TSE9-3026-SM-3DB76 14.8
GTEX-Y8DK-0826-SM-4TT3T 14.8
GTEX-11DXW-1126-SM-5H12Q 14.5
GTEX-RU72-3026-SM-5SI7Y 14.5
GTEX-ZUA1-3026-SM-59HJC 14.5
GTEX-11NUK-2926-SM-5A5MD 14.4
GTEX-14ASI-3026-SM-5S2PN 13.9
GTEX-13OW7-3026-SM-5L3GY 13.7
GTEX-Y111-2726-SM-4TT3N 13.1
GTEX-OXRN-2426-SM-2I5EQ 12.4
GTEX-139T8-1026-SM-5J2MC 12.2
GTEX-147GR-3026-SM-5S2ML 12.1
GTEX-145MH-3026-SM-5Q5DZ 11.4
GTEX-11ZUS-2926-SM-5FQSL 11.1
GTEX-12ZZW-2926-SM-5LZUP 10.5
GTEX-13PL6-3126-SM-5LUAR 10.5
GTEX-WZTO-2926-SM-3NM9I 10.2
GTEX-12ZZX-2926-SM-5GCOQ 9.3
GTEX-13O3Q-2926-SM-5KM45 9.2
GTEX-11PRG-2926-SM-5987A 8.9
GTEX-13X6J-3026-SM-5Q5CU 8.9
GTEX-T2IS-3026-SM-32QPM 8.7
GTEX-YJ89-3026-SM-5IFJI 8.5
GTEX-145MG-3026-SM-5RQJA 8.4
GTEX-144GL-3026-SM-5Q5CW 7.3
GTEX-11EMC-3226-SM-5EGKW 6.8
GTEX-Z93S-2926-SM-57WB9 6.7
GTEX-131XW-3126-SM-5LZUC 6.5
GTEX-ZE7O-3126-SM-5HL5X 3.7
GTEX-ZVT3-3026-SM-5E43N 2.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 122.1
Samples: 108

Max RPKM: 3846.9
Min RPKM: 4.1
Std RPKM: 414.7
Median RPKM: 30.8
GTEX-13N2G-0011-R10a-SM-5MR34 3846.9
GTEX-X585-0011-R10A-SM-46MUY 1555.8
GTEX-X4EP-0011-R10B-SM-4QASJ 1220.3
GTEX-NL4W-0011-R10A-SM-2I3DY 684.6
GTEX-11WQK-0011-R10a-SM-5BC6R 575.0
GTEX-WWYW-0011-R10A-SM-3NB35 381.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 325.9
GTEX-XMD1-0011-R10A-SM-4AT4A 308.7
GTEX-12WSD-0011-R10b-SM-5GU79 185.6
GTEX-T5JC-0011-R10A-SM-32PM2 174.3
GTEX-13NYS-0011-R10a-SM-5MR4S 160.2
GTEX-13X6K-0011-R10a-SM-5P9JR 158.1
GTEX-13QJC-0011-R10a-SM-5SI63 149.7
GTEX-QVUS-0011-R10A-SM-3GIK3 136.6
GTEX-13FLW-0011-R10b-SM-5LZZF 127.1
GTEX-N7MT-0011-R10A-SM-2I3E1 113.8
GTEX-12WSA-0011-R10b-SM-5P9ET 104.4
GTEX-X261-0011-R10B-SM-4E3JT 88.6
GTEX-13CZV-0011-R10b-SM-5LZYD 85.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 83.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 77.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 76.3
GTEX-13JUV-0011-R10b-SM-5LZXR 70.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 69.1
GTEX-RVPU-0011-R10A-SM-2XCAH 67.1
GTEX-XLM4-0011-R10A-SM-4AT5P 66.8
GTEX-13X6I-0011-R10a-SM-5PNWI 65.1
GTEX-13S7M-0011-R10b-SM-5PNZB 64.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 60.9
GTEX-YFC4-0011-R10a-SM-4SOK5 56.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 55.0
GTEX-13N1W-0011-R10b-SM-5MR4H 53.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 52.8
GTEX-13QIC-0011-R10a-SM-5O9C7 51.8
GTEX-P44H-0011-R10A-SM-2XCEK 51.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 51.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 51.7
GTEX-X4XX-0011-R10B-SM-46MWO 51.5
GTEX-QDT8-0011-R10A-SM-32PKG 49.1
GTEX-WVLH-0011-R10A-SM-3MJFM 48.1
GTEX-S7SE-0011-R10A-SM-2XCDF 47.8
GTEX-1445S-0011-R10a-SM-5PNWB 43.7
GTEX-13OVL-0011-R10a-SM-5L3GS 42.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 42.4
GTEX-131YS-0011-R10b-SM-5EQ5N 41.4
GTEX-12WSF-0011-R10a-SM-5LZVH 39.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 38.9
GTEX-TSE9-0011-R10A-SM-3DB7O 37.7
GTEX-13JVG-0011-R10b-SM-5KM2P 36.7
GTEX-12WSH-0011-R10a-SM-5LZUS 36.6
GTEX-145MH-0011-R10b-SM-5PNUK 34.3
GTEX-13IVO-0011-R10a-SM-5LZY3 33.4
GTEX-13O3O-0011-R10a-SM-5LUA9 33.2
GTEX-13G51-0011-R10b-SM-5LZYF 31.6
GTEX-145LU-0011-R10a-SM-5PNWJ 30.0
GTEX-14BIL-0011-R10a-SM-5SI75 28.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 26.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 26.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 25.5
GTEX-145LS-0011-R10a-SM-5PNUQ 25.4
GTEX-12WSM-0011-R10a-SM-5DUWV 25.2
GTEX-11WQC-0011-R10a-SM-57WCT 25.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 25.1
GTEX-145MG-0011-R10a-SM-5PNWG 25.0
GTEX-12WSC-0011-R10a-SM-5GU57 24.9
GTEX-11ZUS-0011-R10b-SM-5BC79 24.3
GTEX-QMR6-0011-R10A-SM-32PKO 24.1
GTEX-OXRO-0011-R10A-SM-2I5EH 23.9
GTEX-OXRN-0011-R10A-SM-2I5GC 23.8
GTEX-WZTO-0011-R10B-SM-4E3KB 23.6
GTEX-ZUA1-0011-R10a-SM-51MT6 23.4
GTEX-13FHO-0011-R10b-SM-5J2MM 23.0
GTEX-147GR-0011-R10b-SM-5S2UM 22.6
GTEX-13SLX-0011-R10a-SM-5P9HV 22.1
GTEX-13OW8-0011-R10a-SM-5L3H6 21.5
GTEX-NL3H-0011-R10A-SM-2I3E9 20.6
GTEX-13O3Q-0011-R10b-SM-5KM39 20.3
GTEX-139TS-0011-R10a-SM-5K7TU 20.2
GTEX-13SLW-0011-R10a-SM-5S2UI 19.8
GTEX-T6MN-0011-R10A-SM-32QP7 19.7
GTEX-ZF28-0011-R10a-SM-4WWEH 19.6
GTEX-131XH-0011-R10a-SM-5EGLJ 18.9
GTEX-ZXG5-0011-R10a-SM-57WDD 18.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 17.9
GTEX-N7MS-0011-R10A-SM-2HMJK 17.7
GTEX-14753-0011-R10b-SM-5S2WE 17.4
GTEX-WL46-0011-R10A-SM-3MJFQ 17.3
GTEX-ZV68-0011-R10a-SM-51MT7 16.8
GTEX-11H98-0011-R10b-SM-5NQ98 16.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 16.4
GTEX-1313W-0011-R10b-SM-5DUXA 15.3
GTEX-13NYB-0011-R10a-SM-5KM43 15.2
GTEX-13X6J-0011-R10b-SM-5PNWA 15.0
GTEX-14BIN-0011-R10a-SM-5S2UA 14.3
GTEX-13FXS-0011-R10a-SM-5J2MA 13.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 13.8
GTEX-13OW7-0011-R10a-SM-5L3H3 13.6
GTEX-13OW6-0011-R10a-SM-5L3HE 13.1
GTEX-1477Z-0011-R10b-SM-5S2RF 11.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 9.3
GTEX-147F4-0011-R10b-SM-5S2WC 9.0
GTEX-12126-0011-R10b-SM-5BC6T 8.9
GTEX-YJ89-0011-R10a-SM-4SOK9 8.0
GTEX-Z93S-0011-R10a-SM-4RGNM 6.8
GTEX-13NZA-0011-R10b-SM-5KM54 6.6
GTEX-12WSE-0011-R10b-SM-5P9JV 6.1
GTEX-131XW-0011-R10a-SM-5DUVA 4.6
GTEX-ZVT3-0011-R10b-SM-57WB6 4.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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