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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.8TPM
GTEx:5.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA001042

 

Antibody HPA029543

 

Antibody CAB023669

 

Antibody CAB062562

 

Antibody CAB067751

 

Antibody CAB068229

 

Antibody CAB068230

 

Antibody CAB068231

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected   Not detected   Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Low   Not detected   Not detected   Medium   Medium   Not detected  

Neuronal cells

High   High   High   High   High   High   High   High  

Neuropil

Not detected   Not detected   Not detected   Not detected   Not detected   Not detected   Not detected   Not detected  
               
               
               

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

22.8

N/A Male, age 5
Sample 1
TPM: 30.6
overview Female, age 40
Sample 2
TPM: 16.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 21.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

5.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 4.7
Samples: 114

Max RPKM: 10.2
Min RPKM: 0.3
Std RPKM: 1.7
Median RPKM: 5
GTEX-PVOW-2526-SM-2XCF7 10.2
GTEX-X4XX-3026-SM-3NMB2 8.3
GTEX-QMR6-1426-SM-32PLA 8.2
GTEX-TSE9-3026-SM-3DB76 7.9
GTEX-13NYC-2826-SM-5K7WR 7.7
GTEX-UTHO-3026-SM-3GAFB 7.5
GTEX-13NYS-3126-SM-5KLYV 7.1
GTEX-RNOR-2326-SM-2TF4I 7.0
GTEX-14ASI-3026-SM-5S2PN 6.8
GTEX-14BMV-3026-SM-5S2PQ 6.8
GTEX-11ZUS-2926-SM-5FQSL 6.7
GTEX-12ZZX-2926-SM-5GCOQ 6.7
GTEX-145MH-3026-SM-5Q5DZ 6.7
GTEX-WL46-2926-SM-3LK82 6.7
GTEX-WZTO-2926-SM-3NM9I 6.6
GTEX-WWYW-3126-SM-3NB39 6.5
GTEX-11NUK-2926-SM-5A5MD 6.4
GTEX-YFC4-3126-SM-5PNV6 6.4
GTEX-131YS-3126-SM-5KLYT 6.3
GTEX-11DXY-3226-SM-5GIDE 6.2
GTEX-T5JC-2426-SM-3NMDB 6.2
GTEX-T6MN-2626-SM-32PMQ 6.2
GTEX-11PRG-2926-SM-5987A 6.1
GTEX-WVLH-3026-SM-3MJG9 6.1
GTEX-ZAK1-3026-SM-5S2MJ 6.1
GTEX-13PL6-3126-SM-5LUAR 6.0
GTEX-145LS-3126-SM-5Q5BY 6.0
GTEX-T2IS-3026-SM-32QPM 6.0
GTEX-13SLX-3126-SM-5S2Q5 5.8
GTEX-Z93S-2926-SM-57WB9 5.8
GTEX-ZYFD-3026-SM-5E44C 5.8
GTEX-111FC-3126-SM-5GZZ2 5.7
GTEX-117XS-3026-SM-5N9CA 5.7
GTEX-132Q8-3026-SM-5PNVG 5.7
GTEX-Y8DK-0826-SM-4TT3T 5.7
GTEX-NPJ8-1526-SM-2D7VU 5.6
GTEX-WHSE-3026-SM-3P5ZH 5.6
GTEX-X585-3026-SM-46MWF 5.6
GTEX-11O72-2926-SM-5BC4V 5.5
GTEX-13VXU-2926-SM-5LU5C 5.5
GTEX-ZUA1-3026-SM-59HJC 5.5
GTEX-1192X-3126-SM-5N9BY 5.4
GTEX-1313W-3126-SM-5LZUI 5.4
GTEX-13FLW-1426-SM-5K7YE 5.4
GTEX-XLM4-3026-SM-4AT6L 5.4
GTEX-12126-1026-SM-5P9JJ 5.3
GTEX-12WSC-3026-SM-5GCNF 5.3
GTEX-12WSH-3026-SM-5CVNI 5.3
GTEX-11DXW-1126-SM-5H12Q 5.2
GTEX-13OVH-3026-SM-5MR4N 5.2
GTEX-ZVT3-3026-SM-5E43N 5.2
GTEX-1128S-2726-SM-5H12C 5.1
GTEX-13FXS-3126-SM-5J2NN 5.1
GTEX-13O3O-3126-SM-5KM3H 5.1
GTEX-13OW6-3026-SM-5J2MI 5.1
GTEX-OXRN-2426-SM-2I5EQ 5.1
GTEX-QVJO-1426-SM-2S1QY 5.0
GTEX-RU72-3026-SM-5SI7Y 5.0
GTEX-XOTO-3026-SM-4B65M 5.0
GTEX-11GSO-2926-SM-5HL73 4.9
GTEX-13O3Q-2926-SM-5KM45 4.8
GTEX-144GL-3026-SM-5Q5CW 4.8
GTEX-R55F-1326-SM-5S2V4 4.8
GTEX-145MG-3026-SM-5RQJA 4.7
GTEX-12ZZZ-3026-SM-5BC67 4.6
GTEX-1399T-3026-SM-5KLZC 4.6
GTEX-14A5I-2926-SM-5Q5CQ 4.6
GTEX-13FHO-3026-SM-5J1O9 4.5
GTEX-13FHP-3026-SM-5IJBS 4.5
GTEX-13QIC-2926-SM-5J2NF 4.5
GTEX-145MF-2726-SM-5O995 4.5
GTEX-12ZZY-3026-SM-5GCOU 4.4
GTEX-QVUS-2826-SM-3GADB 4.4
GTEX-ZAJG-3126-SM-5HL9J 4.3
GTEX-YJ89-3026-SM-5IFJI 4.2
GTEX-13NYB-3026-SM-5IJD7 4.0
GTEX-Q2AG-2926-SM-2HMJ3 4.0
GTEX-QDT8-2926-SM-32PKC 4.0
GTEX-13X6J-3026-SM-5Q5CU 3.9
GTEX-11ONC-2926-SM-5P9JM 3.8
GTEX-13OW8-2826-SM-5L3GC 3.7
GTEX-11WQK-3026-SM-5EQL6 3.5
GTEX-13S7M-3126-SM-5RQJQ 3.5
GTEX-ZZPT-3026-SM-5GZXH 3.5
GTEX-11EI6-3026-SM-5GZZO 3.4
GTEX-Y111-2726-SM-4TT3N 3.4
GTEX-11GS4-3126-SM-5A5LH 3.2
GTEX-11NV4-2126-SM-5N9DS 3.2
GTEX-13IVO-2926-SM-5L3CZ 3.2
GTEX-13OW7-3026-SM-5L3GY 3.2
GTEX-12ZZW-2926-SM-5LZUP 3.1
GTEX-NPJ7-2726-SM-2I3FT 3.1
GTEX-11EMC-3226-SM-5EGKW 2.9
GTEX-13G51-3026-SM-5IJB8 2.9
GTEX-13PVQ-3026-SM-5SI93 2.9
GTEX-N7MT-1126-SM-5SI7V 2.9
GTEX-13JVG-3126-SM-5L3FH 2.7
GTEX-12WSD-3126-SM-5HL7P 2.6
GTEX-131XW-3126-SM-5LZUC 2.6
GTEX-13X6K-2926-SM-5Q5D5 2.6
GTEX-139T8-1026-SM-5J2MC 2.5
GTEX-11OC5-0726-SM-5P9JK 2.4
GTEX-13OVJ-2826-SM-5L3GW 2.4
GTEX-1117F-3226-SM-5N9CT 2.3
GTEX-ZE7O-3126-SM-5HL5X 2.3
GTEX-PWO3-0926-SM-2I5EY 2.2
GTEX-144FL-3026-SM-5O99C 2.1
GTEX-11GSP-3226-SM-5986O 2.0
GTEX-147GR-3026-SM-5S2ML 2.0
GTEX-13JUV-2926-SM-5LZX7 1.9
GTEX-11TTK-2926-SM-5PNYP 1.8
GTEX-12WSA-2926-SM-5EQ4D 1.4
GTEX-1445S-3026-SM-5O9BR 1.4
GTEX-11OF3-2926-SM-5HL78 0.3
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 6.6
Samples: 108

Max RPKM: 13.9
Min RPKM: 1.1
Std RPKM: 2.8
Median RPKM: 6.8
GTEX-NL3H-0011-R10A-SM-2I3E9 13.9
GTEX-QDT8-0011-R10A-SM-32PKG 12.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 11.5
GTEX-X4XX-0011-R10B-SM-46MWO 11.2
GTEX-T6MN-0011-R10A-SM-32QP7 11.1
GTEX-WVLH-0011-R10A-SM-3MJFM 10.9
GTEX-WWYW-0011-R10A-SM-3NB35 10.7
GTEX-X585-0011-R10A-SM-46MUY 10.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 10.6
GTEX-WL46-0011-R10A-SM-3MJFQ 10.6
GTEX-12WSE-0011-R10b-SM-5P9JV 10.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 10.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 9.7
GTEX-WZTO-0011-R10B-SM-4E3KB 9.7
GTEX-12WSF-0011-R10a-SM-5LZVH 9.6
GTEX-131XH-0011-R10a-SM-5EGLJ 9.6
GTEX-13S7M-0011-R10b-SM-5PNZB 9.6
GTEX-145MG-0011-R10a-SM-5PNWG 9.5
GTEX-145MH-0011-R10b-SM-5PNUK 9.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 9.4
GTEX-ZF28-0011-R10a-SM-4WWEH 9.4
GTEX-QMR6-0011-R10A-SM-32PKO 9.1
GTEX-13QIC-0011-R10a-SM-5O9C7 8.9
GTEX-S7SE-0011-R10A-SM-2XCDF 8.9
GTEX-YFC4-0011-R10a-SM-4SOK5 8.9
GTEX-1313W-0011-R10b-SM-5DUXA 8.8
GTEX-145LS-0011-R10a-SM-5PNUQ 8.6
GTEX-12WSM-0011-R10a-SM-5DUWV 8.5
GTEX-13CZV-0011-R10b-SM-5LZYD 8.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 8.3
GTEX-X4EP-0011-R10B-SM-4QASJ 8.1
GTEX-12WSH-0011-R10a-SM-5LZUS 8.0
GTEX-T5JC-0011-R10A-SM-32PM2 8.0
GTEX-13O3Q-0011-R10b-SM-5KM39 7.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 7.8
GTEX-14BIL-0011-R10a-SM-5SI75 7.8
GTEX-14BIN-0011-R10a-SM-5S2UA 7.8
GTEX-N7MS-0011-R10A-SM-2HMJK 7.8
GTEX-OXRN-0011-R10A-SM-2I5GC 7.8
GTEX-131YS-0011-R10b-SM-5EQ5N 7.7
GTEX-13FLW-0011-R10b-SM-5LZZF 7.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 7.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.6
GTEX-11H98-0011-R10b-SM-5NQ98 7.5
GTEX-13FHO-0011-R10b-SM-5J2MM 7.5
GTEX-YJ89-0011-R10a-SM-4SOK9 7.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 7.4
GTEX-13X6K-0011-R10a-SM-5P9JR 7.4
GTEX-13N1W-0011-R10b-SM-5MR4H 7.2
GTEX-13X6I-0011-R10a-SM-5PNWI 7.1
GTEX-QVUS-0011-R10A-SM-3GIK3 7.1
GTEX-13X6J-0011-R10b-SM-5PNWA 7.0
GTEX-13SLX-0011-R10a-SM-5P9HV 6.9
GTEX-N7MT-0011-R10A-SM-2I3E1 6.8
GTEX-XLM4-0011-R10A-SM-4AT5P 6.8
GTEX-13QJC-0011-R10a-SM-5SI63 6.4
GTEX-TSE9-0011-R10A-SM-3DB7O 6.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 6.4
GTEX-147GR-0011-R10b-SM-5S2UM 6.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 6.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 6.0
GTEX-13OW6-0011-R10a-SM-5L3HE 6.0
GTEX-13NYS-0011-R10a-SM-5MR4S 5.8
GTEX-Z93S-0011-R10a-SM-4RGNM 5.8
GTEX-13NYB-0011-R10a-SM-5KM43 5.7
GTEX-13OVL-0011-R10a-SM-5L3GS 5.7
GTEX-13OW7-0011-R10a-SM-5L3H3 5.7
GTEX-145LU-0011-R10a-SM-5PNWJ 5.7
GTEX-12126-0011-R10b-SM-5BC6T 5.6
GTEX-13FXS-0011-R10a-SM-5J2MA 5.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 5.6
GTEX-13O3O-0011-R10a-SM-5LUA9 5.5
GTEX-ZVT3-0011-R10b-SM-57WB6 5.5
GTEX-12WSC-0011-R10a-SM-5GU57 5.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 5.4
GTEX-P44H-0011-R10A-SM-2XCEK 5.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 5.0
GTEX-147F4-0011-R10b-SM-5S2WC 5.0
GTEX-13G51-0011-R10b-SM-5LZYF 4.8
GTEX-ZUA1-0011-R10a-SM-51MT6 4.2
GTEX-13N2G-0011-R10a-SM-5MR34 4.1
GTEX-13OW8-0011-R10a-SM-5L3H6 4.1
GTEX-13SLW-0011-R10a-SM-5S2UI 4.1
GTEX-11WQC-0011-R10a-SM-57WCT 4.0
GTEX-X261-0011-R10B-SM-4E3JT 4.0
GTEX-11WQK-0011-R10a-SM-5BC6R 3.7
GTEX-139TS-0011-R10a-SM-5K7TU 3.7
GTEX-13JUV-0011-R10b-SM-5LZXR 3.4
GTEX-13NZA-0011-R10b-SM-5KM54 3.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 3.3
GTEX-RVPU-0011-R10A-SM-2XCAH 3.2
GTEX-11ZUS-0011-R10b-SM-5BC79 3.1
GTEX-OXRO-0011-R10A-SM-2I5EH 3.1
GTEX-XMD1-0011-R10A-SM-4AT4A 3.1
GTEX-ZXG5-0011-R10a-SM-57WDD 3.1
GTEX-13IVO-0011-R10a-SM-5LZY3 2.9
GTEX-12WSD-0011-R10b-SM-5GU79 2.8
GTEX-NL4W-0011-R10A-SM-2I3DY 2.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 2.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 2.6
GTEX-1477Z-0011-R10b-SM-5S2RF 2.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 2.2
GTEX-14753-0011-R10b-SM-5S2WE 1.9
GTEX-12WSA-0011-R10b-SM-5P9ET 1.6
GTEX-ZV68-0011-R10a-SM-51MT7 1.6
GTEX-13JVG-0011-R10b-SM-5KM2P 1.5
GTEX-1445S-0011-R10a-SM-5PNWB 1.2
GTEX-131XW-0011-R10a-SM-5DUVA 1.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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