We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
EIF2B2
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:10.3RPKM
FANTOM5:23.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA005841

 

Antibody HPA048028

 

Antibody CAB037105

 

Glial cells

Medium   Not detected   Not detected  

Neuronal cells

Medium   Low   Medium  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

10.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 10.3
Samples: 117

Max RPKM: 16.8
Min RPKM: 4.4
Std RPKM: 2.3
Median RPKM: 10.1
GTEX-WWYW-0011-R5A-SM-3NB3E 16.8
GTEX-13NYS-0011-R5a-SM-5MR4D 16.5
GTEX-12WSA-0011-R5b-SM-5GU5I 16.4
GTEX-X4XX-0011-R5A-SM-46MWN 16.4
GTEX-X585-0011-R5A-SM-46MVI 16.2
GTEX-13CIG-0011-R5b-SM-5L3F2 15.1
GTEX-NL3H-0011-R5a-SM-2I3GB 14.4
GTEX-X261-0011-R5A-SM-3NMB4 14.3
GTEX-12WSB-0011-R5b-SM-5GU67 14.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 13.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 13.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 13.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 13.0
GTEX-132Q8-0011-R5a-SM-5IJDM 12.9
GTEX-144GO-0011-R5a-SM-5PNUR 12.8
GTEX-139TT-0011-R5b-SM-5K7W8 12.5
GTEX-13OW5-0011-R5b-SM-5L3FR 12.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 12.3
GTEX-13X6I-0011-R5a-SM-5PNWW 12.1
GTEX-XMD1-0011-R5A-SM-4AT47 12.1
GTEX-13FLV-0011-R5a-SM-5LZWT 12.0
GTEX-RU72-0011-R5A-SM-2TF6U 11.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 11.7
GTEX-13JVG-0011-R5a-SM-5MR4O 11.6
GTEX-13OW6-0011-R5a-SM-5O9BK 11.6
GTEX-13VXU-0011-R5a-SM-5O9D7 11.5
GTEX-UTHO-0011-R5A-SM-3GIJD 11.5
GTEX-QVJO-0011-R5A-SM-2S1QM 11.4
GTEX-11GSP-0011-R5a-SM-57WBE 11.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 11.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 11.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 11.3
GTEX-N7MT-0011-R5a-SM-2I3G6 11.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 11.3
GTEX-WZTO-0011-R5B-SM-3NMC5 11.3
GTEX-14BIM-0011-R5b-SM-5S2RM 11.2
GTEX-RVPV-0011-R5A-SM-2TF69 11.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 11.0
GTEX-ZUA1-0011-R5b-SM-51MTG 11.0
GTEX-13OVH-0011-R5b-SM-5KM4L 10.8
GTEX-13SLX-0011-R5a-SM-5O9BV 10.8
GTEX-PVOW-0011-R5A-SM-32PL7 10.8
GTEX-T2IS-0011-R5A-SM-32QP4 10.8
GTEX-TSE9-0011-R5A-SM-3DB7J 10.8
GTEX-WVLH-0011-R5A-SM-3MJFW 10.8
GTEX-139TS-0011-R5b-SM-5J2MZ 10.7
GTEX-12WSC-0011-R5b-SM-5CVNS 10.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 10.6
GTEX-13X6K-0011-R5b-SM-5PNUE 10.6
GTEX-R55E-0011-R5A-SM-2TC5N 10.6
GTEX-13G51-0011-R5a-SM-5L3EB 10.5
GTEX-12WSF-0011-R5a-SM-5HL8K 10.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 10.4
GTEX-ZVT3-0011-R5a-SM-51MSI 10.4
GTEX-N7MS-0011-R5a-SM-2HMK8 10.3
GTEX-T6MN-0011-R5A-SM-32QPD 10.3
GTEX-13NYB-0011-R5a-SM-5MR45 10.2
GTEX-S7SE-0011-R5A-SM-2XCDA 10.2
GTEX-13OW7-0011-R5b-SM-5O9DM 10.1
GTEX-WL46-0011-R5A-SM-3LK6V 10.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 10.0
GTEX-ZE7O-0011-R5a-SM-57WBO 10.0
GTEX-13OVL-0011-R5b-SM-5L3FU 9.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 9.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 9.8
GTEX-XOTO-0011-R5A-SM-4B657 9.8
GTEX-ZV68-0011-R5a-SM-4YCDW 9.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 9.8
GTEX-1399T-0011-R5b-SM-5IJDK 9.6
GTEX-13X6J-0011-R5b-SM-5PNWT 9.6
GTEX-YFC4-0011-R5a-SM-4RGLR 9.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 9.6
GTEX-ZXG5-0011-R5b-SM-57WBN 9.6
GTEX-11OF3-0011-R5a-SM-57WB4 9.5
GTEX-1313W-0011-R5b-SM-5L3EP 9.5
GTEX-13O3O-0011-R5b-SM-5KM44 9.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 9.4
GTEX-145LS-0011-R5a-SM-5SI65 9.4
GTEX-11H98-0011-R5b-SM-57WCF 9.3
GTEX-11NV4-0011-R5a-SM-5NQ88 9.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 9.3
GTEX-12ZZX-0011-R5a-SM-5HL89 9.2
GTEX-14BIN-0011-R5b-SM-5SI78 9.2
GTEX-13FXS-0011-R5b-SM-5LZYE 9.1
GTEX-1445S-0011-R5a-SM-5PNUS 9.0
GTEX-NL4W-0011-R5a-SM-2I3GD 9.0
GTEX-131YS-0011-R5b-SM-5K7YB 8.9
GTEX-13CZV-0011-R5a-SM-5K7XA 8.9
GTEX-144GL-0011-R5b-SM-5PNUJ 8.9
GTEX-OXRN-0011-R5A-SM-2I5EF 8.9
GTEX-12WSD-0011-R5b-SM-5CVNG 8.8
GTEX-145MH-0011-R5a-SM-5P9JT 8.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.7
GTEX-13JUV-0011-R5a-SM-5LZY5 8.5
GTEX-T5JC-0011-R5A-SM-32PLK 8.5
GTEX-13112-0011-R5b-SM-5DUV8 8.4
GTEX-11WQC-0011-R5a-SM-5BC74 8.3
GTEX-S7PM-0011-R5A-SM-3NM8G 8.2
GTEX-139T8-0011-R5b-SM-5J1MO 8.1
GTEX-NPJ7-0011-R5a-SM-33HBK 8.1
GTEX-QMR6-0011-R5A-SM-32PKT 8.0
GTEX-11UD1-0011-R5b-SM-5P9FP 7.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 7.8
GTEX-14ABY-0011-R5b-SM-5SI7B 7.8
GTEX-13S7M-0011-R5b-SM-5P9HS 7.7
GTEX-13FLW-0011-R5a-SM-5LZX6 7.5
GTEX-RVPU-0011-R5A-SM-2XCAD 7.5
GTEX-1477Z-0011-R5b-SM-5PNUO 7.1
GTEX-13CF2-0011-R5a-SM-5LZWS 7.0
GTEX-P44H-0011-R5A-SM-2XCEX 7.0
GTEX-Z93S-0011-R5b-SM-4RGNI 7.0
GTEX-OHPN-0011-R5A-SM-2I5FF 6.9
GTEX-12WSH-0011-R5b-SM-5P9F3 6.5
GTEX-YJ89-0011-R5a-SM-4V6GM 5.8
GTEX-145MG-0011-R5b-SM-5S2VU 5.6
GTEX-13NZA-0011-R5b-SM-5KM4K 5.4
GTEX-13FHP-0011-R5b-SM-5LZY2 4.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

23.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 23.7
FF:10164-103B2 76 years, female 25.2
FF:10379-105H1 89 years, female 22.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.