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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:30.5TPM
GTEx:13.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA025736

 

Antibody HPA025765

 

Antibody HPA025811

 

Antibody CAB021106

 

Endothelial cells

Low   Low   Not detected   Medium  

Glial cells

Low   Medium   Low   Medium  

Neuronal cells

Low   Medium   Low   Medium  

Neuropil

Medium   Medium   Medium   Medium  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

30.5

N/A Male, age 5
Sample 1
TPM: 27.0
overview Female, age 40
Sample 2
TPM: 28.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 36.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

13.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 13.1
Samples: 114

Max RPKM: 25.2
Min RPKM: 4.5
Std RPKM: 4.3
Median RPKM: 12.7
GTEX-WHSE-3026-SM-3P5ZH 25.2
GTEX-11OC5-0726-SM-5P9JK 24.5
GTEX-WVLH-3026-SM-3MJG9 22.7
GTEX-13NYC-2826-SM-5K7WR 22.2
GTEX-X585-3026-SM-46MWF 21.7
GTEX-T2IS-3026-SM-32QPM 20.6
GTEX-PVOW-2526-SM-2XCF7 20.3
GTEX-WL46-2926-SM-3LK82 20.1
GTEX-14BMV-3026-SM-5S2PQ 19.8
GTEX-ZAK1-3026-SM-5S2MJ 19.8
GTEX-13FLW-1426-SM-5K7YE 19.4
GTEX-T6MN-2626-SM-32PMQ 19.2
GTEX-XLM4-3026-SM-4AT6L 19.1
GTEX-T5JC-2426-SM-3NMDB 19.0
GTEX-ZUA1-3026-SM-59HJC 19.0
GTEX-11DXY-3226-SM-5GIDE 18.0
GTEX-WZTO-2926-SM-3NM9I 18.0
GTEX-13JUV-2926-SM-5LZX7 17.9
GTEX-QVUS-2826-SM-3GADB 17.9
GTEX-11NUK-2926-SM-5A5MD 17.6
GTEX-11ZUS-2926-SM-5FQSL 17.5
GTEX-13VXU-2926-SM-5LU5C 17.3
GTEX-ZYFD-3026-SM-5E44C 17.3
GTEX-13G51-3026-SM-5IJB8 17.2
GTEX-13OW6-3026-SM-5J2MI 17.0
GTEX-132Q8-3026-SM-5PNVG 16.9
GTEX-13OW8-2826-SM-5L3GC 16.7
GTEX-145MH-3026-SM-5Q5DZ 16.0
GTEX-UTHO-3026-SM-3GAFB 16.0
GTEX-14ASI-3026-SM-5S2PN 15.7
GTEX-1313W-3126-SM-5LZUI 15.5
GTEX-13O3Q-2926-SM-5KM45 15.2
GTEX-13OVJ-2826-SM-5L3GW 15.2
GTEX-Y111-2726-SM-4TT3N 15.0
GTEX-13NYB-3026-SM-5IJD7 14.7
GTEX-145MF-2726-SM-5O995 14.6
GTEX-12ZZY-3026-SM-5GCOU 14.4
GTEX-1399T-3026-SM-5KLZC 14.3
GTEX-13SLX-3126-SM-5S2Q5 14.3
GTEX-13FHO-3026-SM-5J1O9 14.2
GTEX-111FC-3126-SM-5GZZ2 14.1
GTEX-12126-1026-SM-5P9JJ 14.0
GTEX-R55F-1326-SM-5S2V4 14.0
GTEX-117XS-3026-SM-5N9CA 13.9
GTEX-13FXS-3126-SM-5J2NN 13.9
GTEX-ZVT3-3026-SM-5E43N 13.9
GTEX-11GSO-2926-SM-5HL73 13.8
GTEX-Y8DK-0826-SM-4TT3T 13.8
GTEX-13X6J-3026-SM-5Q5CU 13.7
GTEX-145LS-3126-SM-5Q5BY 13.5
GTEX-11PRG-2926-SM-5987A 13.4
GTEX-RNOR-2326-SM-2TF4I 13.2
GTEX-WWYW-3126-SM-3NB39 13.2
GTEX-11GS4-3126-SM-5A5LH 13.0
GTEX-13FHP-3026-SM-5IJBS 13.0
GTEX-YFC4-3126-SM-5PNV6 12.9
GTEX-QVJO-1426-SM-2S1QY 12.8
GTEX-13NYS-3126-SM-5KLYV 12.6
GTEX-XOTO-3026-SM-4B65M 12.6
GTEX-144GL-3026-SM-5Q5CW 12.4
GTEX-11TTK-2926-SM-5PNYP 12.3
GTEX-12ZZZ-3026-SM-5BC67 12.3
GTEX-12WSC-3026-SM-5GCNF 12.2
GTEX-11WQK-3026-SM-5EQL6 12.1
GTEX-YJ89-3026-SM-5IFJI 12.1
GTEX-12ZZX-2926-SM-5GCOQ 11.9
GTEX-QMR6-1426-SM-32PLA 11.9
GTEX-11DXW-1126-SM-5H12Q 11.8
GTEX-145MG-3026-SM-5RQJA 11.8
GTEX-TSE9-3026-SM-3DB76 11.3
GTEX-131YS-3126-SM-5KLYT 11.2
GTEX-ZE7O-3126-SM-5HL5X 11.2
GTEX-13O3O-3126-SM-5KM3H 11.0
GTEX-13OVH-3026-SM-5MR4N 11.0
GTEX-13QIC-2926-SM-5J2NF 11.0
GTEX-11ONC-2926-SM-5P9JM 10.8
GTEX-13S7M-3126-SM-5RQJQ 10.7
GTEX-Z93S-2926-SM-57WB9 10.7
GTEX-QDT8-2926-SM-32PKC 10.2
GTEX-13PVQ-3026-SM-5SI93 10.1
GTEX-N7MT-1126-SM-5SI7V 10.1
GTEX-1192X-3126-SM-5N9BY 9.9
GTEX-13X6K-2926-SM-5Q5D5 9.9
GTEX-Q2AG-2926-SM-2HMJ3 9.9
GTEX-11OF3-2926-SM-5HL78 9.7
GTEX-11NV4-2126-SM-5N9DS 9.6
GTEX-12WSD-3126-SM-5HL7P 9.6
GTEX-OXRN-2426-SM-2I5EQ 9.5
GTEX-X4XX-3026-SM-3NMB2 9.5
GTEX-131XW-3126-SM-5LZUC 9.4
GTEX-RU72-3026-SM-5SI7Y 9.3
GTEX-13JVG-3126-SM-5L3FH 9.2
GTEX-14A5I-2926-SM-5Q5CQ 9.2
GTEX-11EMC-3226-SM-5EGKW 8.8
GTEX-144FL-3026-SM-5O99C 8.8
GTEX-11GSP-3226-SM-5986O 8.7
GTEX-13OW7-3026-SM-5L3GY 8.7
GTEX-PWO3-0926-SM-2I5EY 8.6
GTEX-139T8-1026-SM-5J2MC 8.4
GTEX-1128S-2726-SM-5H12C 8.3
GTEX-11O72-2926-SM-5BC4V 8.3
GTEX-12ZZW-2926-SM-5LZUP 8.2
GTEX-12WSH-3026-SM-5CVNI 7.8
GTEX-1117F-3226-SM-5N9CT 7.7
GTEX-NPJ7-2726-SM-2I3FT 7.2
GTEX-ZZPT-3026-SM-5GZXH 7.2
GTEX-12WSA-2926-SM-5EQ4D 6.8
GTEX-147GR-3026-SM-5S2ML 6.5
GTEX-11EI6-3026-SM-5GZZO 6.4
GTEX-NPJ8-1526-SM-2D7VU 6.0
GTEX-ZAJG-3126-SM-5HL9J 5.9
GTEX-13PL6-3126-SM-5LUAR 5.6
GTEX-1445S-3026-SM-5O9BR 5.5
GTEX-13IVO-2926-SM-5L3CZ 4.5
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.6
Samples: 108

Max RPKM: 30.8
Min RPKM: 2.4
Std RPKM: 5.6
Median RPKM: 14.3
GTEX-WVLH-0011-R10A-SM-3MJFM 30.8
GTEX-12WSE-0011-R10b-SM-5P9JV 27.4
GTEX-T6MN-0011-R10A-SM-32QP7 26.6
GTEX-WL46-0011-R10A-SM-3MJFQ 24.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 24.4
GTEX-145MH-0011-R10b-SM-5PNUK 23.8
GTEX-13JUV-0011-R10b-SM-5LZXR 23.7
GTEX-S7SE-0011-R10A-SM-2XCDF 23.4
GTEX-XLM4-0011-R10A-SM-4AT5P 22.9
GTEX-T5JC-0011-R10A-SM-32PM2 22.5
GTEX-WZTO-0011-R10B-SM-4E3KB 22.0
GTEX-X4EP-0011-R10B-SM-4QASJ 21.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 21.0
GTEX-145MG-0011-R10a-SM-5PNWG 20.8
GTEX-1313W-0011-R10b-SM-5DUXA 20.5
GTEX-131XH-0011-R10a-SM-5EGLJ 20.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 20.3
GTEX-12WSF-0011-R10a-SM-5LZVH 20.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 19.9
GTEX-YFC4-0011-R10a-SM-4SOK5 19.8
GTEX-13O3Q-0011-R10b-SM-5KM39 19.7
GTEX-14BIN-0011-R10a-SM-5S2UA 19.6
GTEX-13NYB-0011-R10a-SM-5KM43 19.2
GTEX-13X6J-0011-R10b-SM-5PNWA 19.1
GTEX-12WSC-0011-R10a-SM-5GU57 19.0
GTEX-13FXS-0011-R10a-SM-5J2MA 18.6
GTEX-QVUS-0011-R10A-SM-3GIK3 18.6
GTEX-WWYW-0011-R10A-SM-3NB35 18.0
GTEX-13OVL-0011-R10a-SM-5L3GS 17.9
GTEX-13S7M-0011-R10b-SM-5PNZB 17.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 17.9
GTEX-13OW8-0011-R10a-SM-5L3H6 17.6
GTEX-131YS-0011-R10b-SM-5EQ5N 17.5
GTEX-13QIC-0011-R10a-SM-5O9C7 17.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 17.4
GTEX-13FLW-0011-R10b-SM-5LZZF 17.3
GTEX-12WSM-0011-R10a-SM-5DUWV 17.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 17.0
GTEX-X585-0011-R10A-SM-46MUY 16.9
GTEX-N7MS-0011-R10A-SM-2HMJK 16.5
GTEX-ZUA1-0011-R10a-SM-51MT6 16.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 16.2
GTEX-13X6I-0011-R10a-SM-5PNWI 16.2
GTEX-13FHO-0011-R10b-SM-5J2MM 15.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 15.7
GTEX-YJ89-0011-R10a-SM-4SOK9 15.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 15.5
GTEX-13G51-0011-R10b-SM-5LZYF 15.2
GTEX-12WSD-0011-R10b-SM-5GU79 15.1
GTEX-13NYS-0011-R10a-SM-5MR4S 14.8
GTEX-13OW7-0011-R10a-SM-5L3H3 14.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 14.6
GTEX-145LS-0011-R10a-SM-5PNUQ 14.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 14.4
GTEX-12126-0011-R10b-SM-5BC6T 14.3
GTEX-13X6K-0011-R10a-SM-5P9JR 14.2
GTEX-ZF28-0011-R10a-SM-4WWEH 14.1
GTEX-N7MT-0011-R10A-SM-2I3E1 13.9
GTEX-13OW6-0011-R10a-SM-5L3HE 13.8
GTEX-13CZV-0011-R10b-SM-5LZYD 13.6
GTEX-X4XX-0011-R10B-SM-46MWO 13.5
GTEX-P44H-0011-R10A-SM-2XCEK 13.3
GTEX-147GR-0011-R10b-SM-5S2UM 13.1
GTEX-147F4-0011-R10b-SM-5S2WC 13.0
GTEX-13N1W-0011-R10b-SM-5MR4H 12.9
GTEX-13SLX-0011-R10a-SM-5P9HV 12.9
GTEX-11ZUS-0011-R10b-SM-5BC79 12.7
GTEX-14BIL-0011-R10a-SM-5SI75 12.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 12.4
GTEX-ZVT3-0011-R10b-SM-57WB6 12.4
GTEX-11WQK-0011-R10a-SM-5BC6R 12.3
GTEX-13N2G-0011-R10a-SM-5MR34 12.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.1
GTEX-XMD1-0011-R10A-SM-4AT4A 11.9
GTEX-NL3H-0011-R10A-SM-2I3E9 11.6
GTEX-Z93S-0011-R10a-SM-4RGNM 11.6
GTEX-QDT8-0011-R10A-SM-32PKG 11.4
GTEX-13O3O-0011-R10a-SM-5LUA9 11.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 11.1
GTEX-145LU-0011-R10a-SM-5PNWJ 10.9
GTEX-11H98-0011-R10b-SM-5NQ98 10.5
GTEX-RVPU-0011-R10A-SM-2XCAH 10.5
GTEX-TSE9-0011-R10A-SM-3DB7O 10.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 10.3
GTEX-QMR6-0011-R10A-SM-32PKO 10.2
GTEX-139TS-0011-R10a-SM-5K7TU 9.8
GTEX-OXRN-0011-R10A-SM-2I5GC 9.7
GTEX-12WSA-0011-R10b-SM-5P9ET 8.9
GTEX-12WSH-0011-R10a-SM-5LZUS 8.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 8.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 8.6
GTEX-13QJC-0011-R10a-SM-5SI63 8.3
GTEX-13JVG-0011-R10b-SM-5KM2P 8.1
GTEX-14753-0011-R10b-SM-5S2WE 7.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 7.5
GTEX-1445S-0011-R10a-SM-5PNWB 7.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 7.4
GTEX-ZXG5-0011-R10a-SM-57WDD 7.0
GTEX-13SLW-0011-R10a-SM-5S2UI 6.7
GTEX-11WQC-0011-R10a-SM-57WCT 6.6
GTEX-NL4W-0011-R10A-SM-2I3DY 6.6
GTEX-13NZA-0011-R10b-SM-5KM54 6.0
GTEX-131XW-0011-R10a-SM-5DUVA 5.4
GTEX-1477Z-0011-R10b-SM-5S2RF 5.3
GTEX-X261-0011-R10B-SM-4E3JT 5.1
GTEX-OXRO-0011-R10A-SM-2I5EH 5.0
GTEX-ZV68-0011-R10a-SM-51MT7 4.0
GTEX-13IVO-0011-R10a-SM-5LZY3 2.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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