Tissue expression of TMEM39B - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	6.1	TPM
GTEx:	4.7	RPKM
FANTOM5:	20.6	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA040191	Antibody HPA040224
Adipocytes	Medium	Low
Fibroblasts	Medium	Low
Peripheral nerve	Medium	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Medium
Fibroblasts:	Low
Peripheral nerve:	Medium

Antibody staining	Antibody HPA040191	Antibody HPA040224
Adipocytes	Medium	Medium
Chondrocytes	Medium	Medium
Fibroblasts	Medium	Low
Peripheral nerve	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	6.1

Female, age 80

Sample 1
TPM: 10.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 4.9

Female, age 57

Sample 3
TPM: 0.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 7.9

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 6.7

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.7

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 4.8

Samples: 350

Max RPKM: 8.1
Min RPKM: 2.1
Std RPKM: 1
Median RPKM: 4.7

GTEX-1399T-2726-SM-5K7XK

8.1

GTEX-S7SE-0226-SM-2XCD4

7.8

GTEX-POMQ-2326-SM-5S2VS

7.4

GTEX-13G51-2626-SM-5LZYW

7.1

GTEX-ZYVF-0226-SM-5GIEG

7.1

GTEX-147GR-0426-SM-5S2OL

7.0

GTEX-12WSC-0226-SM-5EQ52

6.9

GTEX-13FHP-0226-SM-5K7WD

6.9

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 4.6

Samples: 227

Max RPKM: 8.1
Min RPKM: 2.1
Std RPKM: 1.1
Median RPKM: 4.5

GTEX-145MI-0826-SM-5SI95

8.1

GTEX-14A6H-1026-SM-5SIAZ

8.1

GTEX-ZYVF-1026-SM-5E44V

7.9

GTEX-13X6H-1726-SM-5Q5EH

7.5

GTEX-1128S-0926-SM-5GZZU

7.2

GTEX-12584-2126-SM-5FQUM

7.1

GTEX-13OVH-1126-SM-5K7YP

7.0

GTEX-11GS4-1026-SM-5N9DE

6.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	20.6

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 20.6

FF:10010-101C1

65,65,76 years, mixed

20.6