We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PDS5A
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.8TPM
GTEx:7.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA036661

 

Antibody HPA036662

 

Endothelial cells

Not detected   Low  

Glial cells

Not detected   Medium  

Neuronal cells

Low   High  

Neuropil

Low   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

22.8

N/A Male, age 5
Sample 1
TPM: 20.2
overview Female, age 40
Sample 2
TPM: 24.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 23.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

7.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 7.1
Samples: 114

Max RPKM: 12.6
Min RPKM: 3.1
Std RPKM: 1.5
Median RPKM: 6.7
GTEX-13NYS-3126-SM-5KLYV 12.6
GTEX-UTHO-3026-SM-3GAFB 12.4
GTEX-11OF3-2926-SM-5HL78 11.3
GTEX-13NYC-2826-SM-5K7WR 10.8
GTEX-PVOW-2526-SM-2XCF7 10.7
GTEX-X585-3026-SM-46MWF 10.6
GTEX-QMR6-1426-SM-32PLA 10.4
GTEX-13IVO-2926-SM-5L3CZ 10.3
GTEX-NPJ8-1526-SM-2D7VU 10.3
GTEX-X4XX-3026-SM-3NMB2 10.1
GTEX-11O72-2926-SM-5BC4V 9.5
GTEX-ZAJG-3126-SM-5HL9J 9.5
GTEX-12WSH-3026-SM-5CVNI 9.1
GTEX-111FC-3126-SM-5GZZ2 8.8
GTEX-1192X-3126-SM-5N9BY 8.7
GTEX-12ZZZ-3026-SM-5BC67 8.7
GTEX-132Q8-3026-SM-5PNVG 8.7
GTEX-13FXS-3126-SM-5J2NN 8.5
GTEX-RNOR-2326-SM-2TF4I 8.4
GTEX-WWYW-3126-SM-3NB39 8.3
GTEX-XLM4-3026-SM-4AT6L 8.3
GTEX-13FHO-3026-SM-5J1O9 8.2
GTEX-14ASI-3026-SM-5S2PN 8.1
GTEX-QVUS-2826-SM-3GADB 8.0
GTEX-N7MT-1126-SM-5SI7V 7.9
GTEX-ZAK1-3026-SM-5S2MJ 7.9
GTEX-QDT8-2926-SM-32PKC 7.8
GTEX-TSE9-3026-SM-3DB76 7.7
GTEX-WZTO-2926-SM-3NM9I 7.7
GTEX-T5JC-2426-SM-3NMDB 7.6
GTEX-13G51-3026-SM-5IJB8 7.5
GTEX-1128S-2726-SM-5H12C 7.4
GTEX-12ZZY-3026-SM-5GCOU 7.4
GTEX-OXRN-2426-SM-2I5EQ 7.4
GTEX-13NYB-3026-SM-5IJD7 7.3
GTEX-145LS-3126-SM-5Q5BY 7.3
GTEX-R55F-1326-SM-5S2V4 7.3
GTEX-13PL6-3126-SM-5LUAR 7.2
GTEX-145MG-3026-SM-5RQJA 7.2
GTEX-QVJO-1426-SM-2S1QY 7.2
GTEX-YFC4-3126-SM-5PNV6 7.2
GTEX-T2IS-3026-SM-32QPM 7.1
GTEX-T6MN-2626-SM-32PMQ 7.1
GTEX-ZZPT-3026-SM-5GZXH 7.1
GTEX-14BMV-3026-SM-5S2PQ 7.0
GTEX-11DXY-3226-SM-5GIDE 6.9
GTEX-13OVH-3026-SM-5MR4N 6.9
GTEX-13OVJ-2826-SM-5L3GW 6.9
GTEX-13OW6-3026-SM-5J2MI 6.9
GTEX-145MH-3026-SM-5Q5DZ 6.9
GTEX-ZUA1-3026-SM-59HJC 6.9
GTEX-11DXW-1126-SM-5H12Q 6.8
GTEX-131YS-3126-SM-5KLYT 6.8
GTEX-13FHP-3026-SM-5IJBS 6.8
GTEX-NPJ7-2726-SM-2I3FT 6.8
GTEX-11NUK-2926-SM-5A5MD 6.7
GTEX-11WQK-3026-SM-5EQL6 6.7
GTEX-13FLW-1426-SM-5K7YE 6.7
GTEX-13JVG-3126-SM-5L3FH 6.7
GTEX-13S7M-3126-SM-5RQJQ 6.7
GTEX-14A5I-2926-SM-5Q5CQ 6.7
GTEX-Q2AG-2926-SM-2HMJ3 6.7
GTEX-WL46-2926-SM-3LK82 6.7
GTEX-ZVT3-3026-SM-5E43N 6.7
GTEX-11GSO-2926-SM-5HL73 6.6
GTEX-13O3O-3126-SM-5KM3H 6.6
GTEX-144FL-3026-SM-5O99C 6.6
GTEX-Y8DK-0826-SM-4TT3T 6.6
GTEX-ZYFD-3026-SM-5E44C 6.6
GTEX-11PRG-2926-SM-5987A 6.5
GTEX-1313W-3126-SM-5LZUI 6.5
GTEX-13VXU-2926-SM-5LU5C 6.5
GTEX-13OW7-3026-SM-5L3GY 6.4
GTEX-13OW8-2826-SM-5L3GC 6.4
GTEX-13QIC-2926-SM-5J2NF 6.4
GTEX-RU72-3026-SM-5SI7Y 6.4
GTEX-12WSD-3126-SM-5HL7P 6.3
GTEX-117XS-3026-SM-5N9CA 6.2
GTEX-12ZZX-2926-SM-5GCOQ 6.2
GTEX-1399T-3026-SM-5KLZC 6.2
GTEX-139T8-1026-SM-5J2MC 6.2
GTEX-13PVQ-3026-SM-5SI93 6.2
GTEX-144GL-3026-SM-5Q5CW 6.2
GTEX-1117F-3226-SM-5N9CT 6.1
GTEX-11EI6-3026-SM-5GZZO 6.1
GTEX-11ONC-2926-SM-5P9JM 6.1
GTEX-12126-1026-SM-5P9JJ 6.1
GTEX-12WSC-3026-SM-5GCNF 6.1
GTEX-13O3Q-2926-SM-5KM45 6.1
GTEX-13X6J-3026-SM-5Q5CU 6.1
GTEX-XOTO-3026-SM-4B65M 6.1
GTEX-WVLH-3026-SM-3MJG9 6.0
GTEX-11ZUS-2926-SM-5FQSL 5.9
GTEX-145MF-2726-SM-5O995 5.9
GTEX-PWO3-0926-SM-2I5EY 5.9
GTEX-YJ89-3026-SM-5IFJI 5.9
GTEX-Z93S-2926-SM-57WB9 5.8
GTEX-11GS4-3126-SM-5A5LH 5.7
GTEX-11TTK-2926-SM-5PNYP 5.7
GTEX-13SLX-3126-SM-5S2Q5 5.7
GTEX-12ZZW-2926-SM-5LZUP 5.6
GTEX-13X6K-2926-SM-5Q5D5 5.6
GTEX-147GR-3026-SM-5S2ML 5.6
GTEX-WHSE-3026-SM-3P5ZH 5.6
GTEX-11OC5-0726-SM-5P9JK 5.4
GTEX-11EMC-3226-SM-5EGKW 5.2
GTEX-1445S-3026-SM-5O9BR 5.2
GTEX-131XW-3126-SM-5LZUC 5.1
GTEX-12WSA-2926-SM-5EQ4D 5.0
GTEX-11GSP-3226-SM-5986O 4.9
GTEX-Y111-2726-SM-4TT3N 4.9
GTEX-ZE7O-3126-SM-5HL5X 4.9
GTEX-13JUV-2926-SM-5LZX7 4.7
GTEX-11NV4-2126-SM-5N9DS 3.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 8.1
Samples: 108

Max RPKM: 14.2
Min RPKM: 4
Std RPKM: 2
Median RPKM: 7.7
GTEX-WWYW-0011-R10A-SM-3NB35 14.2
GTEX-QDT8-0011-R10A-SM-32PKG 13.7
GTEX-QVUS-0011-R10A-SM-3GIK3 13.2
GTEX-13N2G-0011-R10a-SM-5MR34 12.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 12.6
GTEX-X585-0011-R10A-SM-46MUY 12.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 12.5
GTEX-X4XX-0011-R10B-SM-46MWO 12.4
GTEX-NL3H-0011-R10A-SM-2I3E9 11.9
GTEX-XMD1-0011-R10A-SM-4AT4A 11.2
GTEX-X4EP-0011-R10B-SM-4QASJ 11.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 10.8
GTEX-T6MN-0011-R10A-SM-32QP7 10.5
GTEX-QMR6-0011-R10A-SM-32PKO 10.4
GTEX-12WSH-0011-R10a-SM-5LZUS 10.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 10.2
GTEX-13QJC-0011-R10a-SM-5SI63 9.9
GTEX-WVLH-0011-R10A-SM-3MJFM 9.9
GTEX-ZF28-0011-R10a-SM-4WWEH 9.9
GTEX-13NYS-0011-R10a-SM-5MR4S 9.6
GTEX-YFC4-0011-R10a-SM-4SOK5 9.6
GTEX-13CZV-0011-R10b-SM-5LZYD 9.4
GTEX-S7SE-0011-R10A-SM-2XCDF 9.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 9.3
GTEX-13X6I-0011-R10a-SM-5PNWI 9.2
GTEX-OXRN-0011-R10A-SM-2I5GC 9.2
GTEX-14BIL-0011-R10a-SM-5SI75 8.7
GTEX-X261-0011-R10B-SM-4E3JT 8.7
GTEX-13S7M-0011-R10b-SM-5PNZB 8.6
GTEX-145MH-0011-R10b-SM-5PNUK 8.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 8.6
GTEX-WL46-0011-R10A-SM-3MJFQ 8.6
GTEX-13FHO-0011-R10b-SM-5J2MM 8.5
GTEX-13QIC-0011-R10a-SM-5O9C7 8.5
GTEX-12WSF-0011-R10a-SM-5LZVH 8.4
GTEX-145LS-0011-R10a-SM-5PNUQ 8.4
GTEX-P44H-0011-R10A-SM-2XCEK 8.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 8.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 8.3
GTEX-13FLW-0011-R10b-SM-5LZZF 8.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 8.3
GTEX-YJ89-0011-R10a-SM-4SOK9 8.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 8.2
GTEX-T5JC-0011-R10A-SM-32PM2 8.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 8.2
GTEX-12WSE-0011-R10b-SM-5P9JV 8.1
GTEX-13O3Q-0011-R10b-SM-5KM39 8.1
GTEX-OXRO-0011-R10A-SM-2I5EH 8.0
GTEX-12126-0011-R10b-SM-5BC6T 7.9
GTEX-131XH-0011-R10a-SM-5EGLJ 7.9
GTEX-13N1W-0011-R10b-SM-5MR4H 7.9
GTEX-N7MT-0011-R10A-SM-2I3E1 7.9
GTEX-131YS-0011-R10b-SM-5EQ5N 7.8
GTEX-145MG-0011-R10a-SM-5PNWG 7.7
GTEX-RVPU-0011-R10A-SM-2XCAH 7.7
GTEX-XLM4-0011-R10A-SM-4AT5P 7.7
GTEX-13IVO-0011-R10a-SM-5LZY3 7.6
GTEX-13O3O-0011-R10a-SM-5LUA9 7.6
GTEX-14BIN-0011-R10a-SM-5S2UA 7.6
GTEX-WZTO-0011-R10B-SM-4E3KB 7.6
GTEX-12WSM-0011-R10a-SM-5DUWV 7.5
GTEX-13FXS-0011-R10a-SM-5J2MA 7.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 7.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 7.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.3
GTEX-13SLX-0011-R10a-SM-5P9HV 7.3
GTEX-1313W-0011-R10b-SM-5DUXA 7.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 7.2
GTEX-13X6K-0011-R10a-SM-5P9JR 7.2
GTEX-TSE9-0011-R10A-SM-3DB7O 7.2
GTEX-11ZUS-0011-R10b-SM-5BC79 7.1
GTEX-12WSC-0011-R10a-SM-5GU57 7.1
GTEX-NL4W-0011-R10A-SM-2I3DY 7.1
GTEX-13SLW-0011-R10a-SM-5S2UI 7.0
GTEX-147GR-0011-R10b-SM-5S2UM 7.0
GTEX-Z93S-0011-R10a-SM-4RGNM 7.0
GTEX-12WSD-0011-R10b-SM-5GU79 6.9
GTEX-13OVL-0011-R10a-SM-5L3GS 6.9
GTEX-N7MS-0011-R10A-SM-2HMJK 6.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 6.8
GTEX-11H98-0011-R10b-SM-5NQ98 6.7
GTEX-ZVT3-0011-R10b-SM-57WB6 6.7
GTEX-13OW6-0011-R10a-SM-5L3HE 6.6
GTEX-13NYB-0011-R10a-SM-5KM43 6.4
GTEX-11WQC-0011-R10a-SM-57WCT 6.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 6.3
GTEX-13OW7-0011-R10a-SM-5L3H3 6.3
GTEX-13OW8-0011-R10a-SM-5L3H6 6.3
GTEX-13X6J-0011-R10b-SM-5PNWA 6.3
GTEX-145LU-0011-R10a-SM-5PNWJ 6.3
GTEX-147F4-0011-R10b-SM-5S2WC 6.3
GTEX-12WSA-0011-R10b-SM-5P9ET 6.2
GTEX-ZUA1-0011-R10a-SM-51MT6 6.2
GTEX-13JUV-0011-R10b-SM-5LZXR 6.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 6.0
GTEX-11WQK-0011-R10a-SM-5BC6R 5.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 5.7
GTEX-13G51-0011-R10b-SM-5LZYF 5.6
GTEX-13JVG-0011-R10b-SM-5KM2P 5.6
GTEX-1445S-0011-R10a-SM-5PNWB 5.5
GTEX-139TS-0011-R10a-SM-5K7TU 5.4
GTEX-13NZA-0011-R10b-SM-5KM54 5.0
GTEX-ZV68-0011-R10a-SM-51MT7 5.0
GTEX-ZXG5-0011-R10a-SM-57WDD 4.9
GTEX-14753-0011-R10b-SM-5S2WE 4.3
GTEX-1477Z-0011-R10b-SM-5S2RF 4.1
GTEX-131XW-0011-R10a-SM-5DUVA 4.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.