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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TRIM24
  • TISSUE

  • premium

    CELL

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

TRIM24

Gene description

Tripartite motif containing 24

Protein class

Cancer-related genes
Disease related genes
Plasma proteins
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

General nuclear expression with additional cytoplasmic expression in several tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
HPA043495
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
N/A
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Thyroid gland

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

TRIM24 (HGNC Symbol)

Synonyms

hTIF1, RNF82, TIF1, Tif1a

Description

Tripartite motif containing 24 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene mediates transcriptional control by interaction with the activation function 2 (AF2) region of several nuclear receptors, including the estrogen, retinoic acid, and vitamin D3 receptors. The protein localizes to nuclear bodies and is thought to associate with chromatin and heterochromatin-associated factors. The protein is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains - a RING, a B-box type 1 and a B-box type 2 - and a coiled-coil region. Two alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]

Chromosome

7

Cytoband

Chromosome location (bp)

138460334 - 138589993

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000122779 (version 83.38)

Entrez gene

8805

UniProt

O15164 (UniProt - Evidence at protein level)

neXtProt

NX_O15164

Antibodypedia

TRIM24 antibodies

PROTEIN BROWSER

TRIM24-001
TRIM24-007
TRIM24-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TRIM24-001
ENSP00000340507
ENST00000343526
O15164 [Direct mapping]
Transcription intermediary factor 1-alpha
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002039 [p53 binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0004672 [protein kinase activity]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005102 [receptor binding]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005719 [nuclear euchromatin]
GO:0005726 [perichromatin fibrils]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0006468 [protein phosphorylation]
GO:0008270 [zinc ion binding]
GO:0008285 [negative regulation of cell proliferation]
GO:0010628 [positive regulation of gene expression]
GO:0016567 [protein ubiquitination]
GO:0016874 [ligase activity]
GO:0016922 [ligand-dependent nuclear receptor binding]
GO:0030163 [protein catabolic process]
GO:0031647 [regulation of protein stability]
GO:0034056 [estrogen response element binding]
GO:0042981 [regulation of apoptotic process]
GO:0043565 [sequence-specific DNA binding]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0046777 [protein autophosphorylation]
GO:0055074 [calcium ion homeostasis]
GO:0061630 [ubiquitin protein ligase activity]
GO:0070562 [regulation of vitamin D receptor signaling pathway]
GO:0070577 [lysine-acetylated histone binding]
GO:0071391 [cellular response to estrogen stimulus]
GO:1901796 [regulation of signal transduction by p53 class mediator]
Show all
1050 aa
116.8 kDa
Yes 0
TRIM24-007
ENSP00000390829
ENST00000415680
O15164 [Direct mapping]
Transcription intermediary factor 1-alpha
A0A024R784 [Target identity:100%; Query identity:100%]
Tripartite motif-containing 24, isoform CRA_a
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002039 [p53 binding]
GO:0003682 [chromatin binding]
GO:0003713 [transcription coactivator activity]
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005102 [receptor binding]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0008270 [zinc ion binding]
GO:0016567 [protein ubiquitination]
GO:0016874 [ligase activity]
GO:0030163 [protein catabolic process]
GO:0031647 [regulation of protein stability]
GO:0034056 [estrogen response element binding]
GO:0042981 [regulation of apoptotic process]
GO:0070577 [lysine-acetylated histone binding]
GO:0071391 [cellular response to estrogen stimulus]
Show all
1016 aa
113 kDa
Yes 0
TRIM24-201
ENSP00000484482
ENST00000620194
A0A087X1V3 [Direct mapping]
Transcription intermediary factor 1-alpha
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0008270 [zinc ion binding]
Show all
1012 aa
113.1 kDa
No 0

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