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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:11.8TPM
GTEx:32.2RPKM
FANTOM5:30.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA004799

 

Antibody HPA022271

 

Antibody CAB019284

 

Adipocytes

Low   Low   Medium  

Glandular cells

Medium   High   Medium  

Myoepithelial cells

Medium   High   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

11.8

overview Female, age 52
Sample 1
TPM: 11.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 14.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 19.2
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 2.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

32.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 32.2
Samples: 214

Max RPKM: 90.9
Min RPKM: 5.8
Std RPKM: 17
Median RPKM: 26.3
GTEX-YB5E-1726-SM-5IFJ3 90.9
GTEX-XMK1-1126-SM-4IHJ8 83.7
GTEX-14ABY-2126-SM-5QGQZ 80.4
GTEX-WY7C-2726-SM-3NB3P 77.2
GTEX-PSDG-1626-SM-48TCQ 76.9
GTEX-XGQ4-0926-SM-4AT4U 69.5
GTEX-ZT9W-2026-SM-51MRA 69.0
GTEX-ZQG8-0726-SM-5P9H9 67.9
GTEX-11ZTT-2326-SM-5EQLG 66.8
GTEX-13FTW-1426-SM-5LZWZ 66.5
GTEX-ZZ64-1226-SM-5E43R 66.5
GTEX-ZAB4-2526-SM-5HL8M 66.3
GTEX-117YX-1426-SM-5H12H 65.9
GTEX-REY6-2426-SM-48FF5 65.4
GTEX-ZDYS-1126-SM-5K7UB 64.1
GTEX-YB5K-1626-SM-5IFIN 63.4
GTEX-Y8E4-1626-SM-5S2MW 62.7
GTEX-S4Q7-1126-SM-4AD6R 62.5
GTEX-XQ8I-2426-SM-4WAXY 62.1
GTEX-139T6-1626-SM-5PNYZ 61.9
GTEX-11I78-2226-SM-5PNYA 60.9
GTEX-13FTX-1126-SM-5N9EN 59.6
GTEX-11DXZ-1926-SM-5GZZL 57.7
GTEX-144GM-0926-SM-5O994 57.7
GTEX-ZQUD-1926-SM-51MSA 57.7
GTEX-13CF3-2126-SM-5IFJP 57.4
GTEX-ZPIC-1126-SM-5BC7F 56.2
GTEX-ZV6S-1826-SM-5NQ8D 56.1
GTEX-XQ3S-1326-SM-4BOPQ 55.3
GTEX-Y5V6-2126-SM-4WWFX 54.2
GTEX-U8XE-0826-SM-4E3J1 53.5
GTEX-YEC3-1026-SM-5IFI5 53.4
GTEX-S4UY-0726-SM-4AD6X 52.9
GTEX-145ME-1526-SM-5Q5F2 51.7
GTEX-ZYWO-2326-SM-5GZY4 50.5
GTEX-11ZUS-0826-SM-5FQUY 50.4
GTEX-1399U-1826-SM-5PNZ1 50.3
GTEX-ZYT6-0126-SM-5E45J 50.1
GTEX-12KS4-0126-SM-5Q5A5 49.8
GTEX-R55D-0826-SM-48FEA 49.8
GTEX-QMRM-1626-SM-4R1KV 48.9
GTEX-SE5C-2126-SM-4BRUJ 48.9
GTEX-ZLFU-2126-SM-4WWEV 47.8
GTEX-T6MO-0326-SM-32QOK 46.0
GTEX-XV7Q-2326-SM-4BRVZ 45.1
GTEX-YFCO-1826-SM-4W1YH 45.1
GTEX-139TU-0626-SM-5KM3X 44.7
GTEX-145MO-0826-SM-5NQBL 44.6
GTEX-S33H-0326-SM-4AD6N 44.0
GTEX-14E6E-1326-SM-5S2NR 43.8
GTEX-13O61-1826-SM-5KM4I 42.7
GTEX-1211K-1926-SM-5EQLB 41.7
GTEX-T5JW-2026-SM-4DM63 41.4
GTEX-ZVTK-0326-SM-51MRR 41.3
GTEX-TKQ1-0226-SM-33HB5 41.2
GTEX-R53T-1526-SM-48FEK 40.6
GTEX-Y9LG-1426-SM-5IFJZ 40.6
GTEX-11EQ9-1826-SM-5Q5AJ 40.0
GTEX-11P82-1326-SM-5HL62 39.8
GTEX-11NSD-0926-SM-5N9DR 39.5
GTEX-S32W-2026-SM-4AD6E 39.4
GTEX-12BJ1-1826-SM-5HL9N 38.8
GTEX-U412-1826-SM-4DXTJ 38.6
GTEX-145LT-0726-SM-5S2VM 38.4
GTEX-Y114-2026-SM-4TT7L 37.1
GTEX-ZDTT-2126-SM-5S2OJ 37.0
GTEX-11ONC-2126-SM-5HL6E 36.6
GTEX-VUSG-2226-SM-4KKZO 36.6
GTEX-UTHO-1026-SM-3GAF7 36.1
GTEX-T5JC-2126-SM-32PMO 35.9
GTEX-132NY-0826-SM-5K7Y7 34.9
GTEX-QEL4-2126-SM-447AE 34.5
GTEX-11TT1-2126-SM-5GU5Y 34.0
GTEX-ZA64-1526-SM-5CVMD 33.7
GTEX-RUSQ-2026-SM-4GIAK 33.6
GTEX-13NZB-2126-SM-5MR4Y 33.5
GTEX-11TUW-1826-SM-5BC5D 32.5
GTEX-144GL-2026-SM-5LU3O 32.5
GTEX-145MN-1926-SM-5SIAI 32.5
GTEX-111YS-1926-SM-5GICC 32.4
GTEX-ZDXO-0126-SM-5S2ND 32.4
GTEX-11O72-2126-SM-5N9FO 32.1
GTEX-12WSN-1326-SM-5GCNT 32.1
GTEX-XUW1-2326-SM-4BOO5 31.6
GTEX-11LCK-2426-SM-5HL5F 31.4
GTEX-132AR-0826-SM-5EGK6 31.4
GTEX-ZUA1-1526-SM-59HLS 30.6
GTEX-Y8LW-1626-SM-5IFHX 30.0
GTEX-ZYFC-0826-SM-5E44K 29.9
GTEX-WFON-1826-SM-3GILG 29.8
GTEX-1192X-2326-SM-5987X 29.7
GTEX-U3ZN-1926-SM-4DXSG 29.7
GTEX-133LE-1726-SM-5K7VQ 29.6
GTEX-117XS-1926-SM-5GICO 29.3
GTEX-13D11-1026-SM-5IJFB 29.0
GTEX-ZLV1-1426-SM-4WWES 28.7
GTEX-XYKS-1326-SM-4BRUN 28.6
GTEX-Y5V5-2126-SM-4WWFO 27.5
GTEX-11PRG-0826-SM-5EQ6A 27.1
GTEX-14AS3-1626-SM-5S2OY 27.1
GTEX-Y5LM-1726-SM-4VDSX 27.0
GTEX-YJ8O-2226-SM-5IFHW 26.9
GTEX-13W3W-1226-SM-5LU4H 26.8
GTEX-WXYG-2226-SM-4E3IM 26.8
GTEX-13CF2-2026-SM-5K7VI 26.5
GTEX-X4XY-0926-SM-4E3JD 26.5
GTEX-147F4-2826-SM-5NQBN 26.4
GTEX-11GSO-1926-SM-5A5K3 26.1
GTEX-13OW8-0226-SM-5K7UP 26.0
GTEX-T6MN-0726-SM-32PML 26.0
GTEX-11P81-1926-SM-5BC53 25.8
GTEX-13113-1726-SM-5GCOO 25.8
GTEX-146FH-0826-SM-5SI8T 25.8
GTEX-11DXW-0626-SM-5N9ER 25.7
GTEX-ZVT4-1026-SM-57WC4 25.4
GTEX-13S86-1226-SM-5S2OA 25.3
GTEX-WYBS-0926-SM-3NM94 25.3
GTEX-SIU7-1626-SM-4BRUK 25.2
GTEX-ZVZQ-0826-SM-51MRF 25.0
GTEX-11GS4-2126-SM-5A5KR 24.4
GTEX-11P7K-0726-SM-5EGKX 24.4
GTEX-UPK5-2326-SM-3P5Z8 24.3
GTEX-13FHO-0826-SM-5L3E8 24.2
GTEX-Y3I4-1526-SM-4TT7K 24.1
GTEX-1117F-2826-SM-5GZXL 24.0
GTEX-12WSM-1726-SM-5BC6J 23.9
GTEX-13N1W-0626-SM-5MR4U 23.8
GTEX-ZF2S-2026-SM-5E461 23.7
GTEX-Y111-2026-SM-4SOJA 23.5
GTEX-S341-1526-SM-4AD6K 23.4
GTEX-11DXY-2326-SM-5GICW 23.2
GTEX-13OW5-2226-SM-5L3HC 23.1
GTEX-S7SE-0826-SM-4AT4D 22.9
GTEX-ZTTD-1026-SM-51MRD 22.8
GTEX-11DZ1-0326-SM-5N9BN 22.7
GTEX-ZXES-0826-SM-5E43C 22.4
GTEX-13N11-1726-SM-5J1OJ 22.3
GTEX-ZU9S-1926-SM-5NQBP 22.3
GTEX-QVJO-1826-SM-447C9 22.2
GTEX-R55F-1726-SM-2TF4R 22.2
GTEX-ZY6K-1626-SM-5GZWV 22.0
GTEX-RWS6-1926-SM-47JXY 21.9
GTEX-UJHI-1426-SM-3DB9C 21.7
GTEX-1122O-1226-SM-5H113 21.6
GTEX-Y3IK-2326-SM-4WWDT 21.5
GTEX-WYJK-1326-SM-3NB2T 21.4
GTEX-XMD1-0826-SM-4AT52 21.3
GTEX-ZVT2-1826-SM-5NQ8W 21.3
GTEX-11EMC-2026-SM-5A5JV 21.0
GTEX-X261-0626-SM-3NMD9 21.0
GTEX-ZTX8-1226-SM-4YCE9 20.9
GTEX-131YS-0626-SM-5EGKL 20.8
GTEX-13PVQ-1026-SM-5KM3M 20.7
GTEX-ZEX8-2226-SM-57WC6 20.7
GTEX-TKQ2-1826-SM-33HB2 20.5
GTEX-QEG5-0726-SM-4R1JQ 20.1
GTEX-U3ZH-1426-SM-4DXSR 20.1
GTEX-ZYW4-0826-SM-5GIDG 19.9
GTEX-TMMY-0726-SM-33HBE 19.8
GTEX-ZV7C-1826-SM-5NQ83 19.8
GTEX-TML8-1226-SM-32QON 19.7
GTEX-XOT4-0726-SM-4GIAW 19.4
GTEX-1313W-0826-SM-5EQ4T 19.3
GTEX-XUJ4-1926-SM-4BOOV 19.2
GTEX-13FTY-2226-SM-5J1ND 19.1
GTEX-13NZ9-1026-SM-5MR5K 18.8
GTEX-WRHU-0326-SM-3MJFY 18.8
GTEX-11OF3-1926-SM-59889 18.7
GTEX-11WQC-1726-SM-5GU4W 18.5
GTEX-13O3Q-2226-SM-5KM4O 18.5
GTEX-Q2AG-0326-SM-48U1O 18.5
GTEX-11NV4-2026-SM-5N9DG 18.4
GTEX-12WSK-2226-SM-5GCO5 18.4
GTEX-11EI6-0626-SM-5985T 18.3
GTEX-1314G-1226-SM-5BC6D 18.3
GTEX-132Q8-1426-SM-5EGK7 18.3
GTEX-WI4N-1426-SM-3LK7H 18.1
GTEX-12WSB-0626-SM-59HJO 17.9
GTEX-ZZPU-0626-SM-5E43T 17.5
GTEX-X15G-1626-SM-3NMB3 17.4
GTEX-ZVE2-1226-SM-5NQ8R 17.0
GTEX-13QIC-2326-SM-5LU5N 16.9
GTEX-QDT8-0626-SM-48TYW 16.6
GTEX-YFC4-1426-SM-5IFJG 16.5
GTEX-ZF29-1926-SM-5S2P1 16.4
GTEX-13PL6-2926-SM-5L3I2 16.1
GTEX-S4P3-1326-SM-4AD6V 16.1
GTEX-XBED-1626-SM-47JYN 16.0
GTEX-T2YK-2226-SM-32QPT 15.9
GTEX-14753-2426-SM-5LU8U 15.8
GTEX-XMD2-0926-SM-4WWEF 15.5
GTEX-139T8-0826-SM-5L3DE 15.4
GTEX-T2IS-1526-SM-32QPR 15.4
GTEX-13NZ8-0126-SM-5IJCT 14.7
GTEX-ZC5H-2626-SM-5J2MG 14.5
GTEX-131XW-0726-SM-5EGK3 14.3
GTEX-WYVS-1726-SM-3NMAY 14.2
GTEX-R3RS-0626-SM-48FE1 14.0
GTEX-ZF3C-2326-SM-5S2MZ 14.0
GTEX-RU72-0626-SM-46MUI 13.9
GTEX-WOFL-0826-SM-3MJG1 13.9
GTEX-ZWKS-2826-SM-5NQ74 13.8
GTEX-12ZZX-1126-SM-5EGKB 13.5
GTEX-ZAJG-0626-SM-5HL8X 13.3
GTEX-13W46-0826-SM-5LU3H 13.2
GTEX-11EM3-1326-SM-5N9C6 13.1
GTEX-1269C-2426-SM-5FQSN 12.8
GTEX-13O3P-0826-SM-5L3DH 12.0
GTEX-13O3O-0826-SM-5K7WE 11.5
GTEX-XUZC-1626-SM-4BRVP 11.2
GTEX-X4EP-2926-SM-3P5YQ 11.0
GTEX-VJWN-0726-SM-3GIJ8 10.9
GTEX-11WQK-2426-SM-5GU5C 8.1
GTEX-W5X1-2326-SM-3GIL6 5.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

30.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 30.3
FF:10080-102A8 77 years, female 30.3

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