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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:6.5TPM
GTEx:7.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA004799

 

Antibody HPA022271

 

Antibody CAB019284

 

Endothelial cells

Not detected   Medium   Medium  

Glial cells

Not detected   Medium   Low  

Neuronal cells

Not detected   Not detected   Medium  

Neuropil

Medium   Low   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

6.5

N/A Male, age 5
Sample 1
TPM: 9.4
overview Female, age 40
Sample 2
TPM: 5.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 5.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 8.3
Samples: 114

Max RPKM: 18.3
Min RPKM: 2.8
Std RPKM: 2.7
Median RPKM: 8
GTEX-13OVJ-2826-SM-5L3GW 18.3
GTEX-13JVG-3126-SM-5L3FH 16.8
GTEX-11EMC-3226-SM-5EGKW 14.4
GTEX-1117F-3226-SM-5N9CT 14.3
GTEX-13FHO-3026-SM-5J1O9 13.8
GTEX-11WQK-3026-SM-5EQL6 13.5
GTEX-11TTK-2926-SM-5PNYP 13.4
GTEX-13OW7-3026-SM-5L3GY 13.1
GTEX-12ZZW-2926-SM-5LZUP 12.7
GTEX-QDT8-2926-SM-32PKC 12.4
GTEX-ZE7O-3126-SM-5HL5X 12.4
GTEX-QVUS-2826-SM-3GADB 12.0
GTEX-1445S-3026-SM-5O9BR 11.9
GTEX-13G51-3026-SM-5IJB8 11.6
GTEX-139T8-1026-SM-5J2MC 11.4
GTEX-1192X-3126-SM-5N9BY 11.3
GTEX-13QIC-2926-SM-5J2NF 11.2
GTEX-11GSP-3226-SM-5986O 11.1
GTEX-12WSD-3126-SM-5HL7P 10.9
GTEX-131XW-3126-SM-5LZUC 10.8
GTEX-13OVH-3026-SM-5MR4N 10.7
GTEX-ZZPT-3026-SM-5GZXH 10.7
GTEX-12WSA-2926-SM-5EQ4D 10.6
GTEX-144FL-3026-SM-5O99C 10.4
GTEX-1128S-2726-SM-5H12C 10.3
GTEX-Y111-2726-SM-4TT3N 10.2
GTEX-ZVT3-3026-SM-5E43N 10.2
GTEX-13S7M-3126-SM-5RQJQ 10.1
GTEX-N7MT-1126-SM-5SI7V 10.0
GTEX-13X6K-2926-SM-5Q5D5 9.8
GTEX-XLM4-3026-SM-4AT6L 9.8
GTEX-PWO3-0926-SM-2I5EY 9.5
GTEX-13NYB-3026-SM-5IJD7 9.3
GTEX-NPJ7-2726-SM-2I3FT 9.3
GTEX-13OW8-2826-SM-5L3GC 9.1
GTEX-11GSO-2926-SM-5HL73 9.0
GTEX-13PVQ-3026-SM-5SI93 9.0
GTEX-144GL-3026-SM-5Q5CW 9.0
GTEX-12ZZY-3026-SM-5GCOU 8.8
GTEX-145MF-2726-SM-5O995 8.8
GTEX-12ZZZ-3026-SM-5BC67 8.7
GTEX-132Q8-3026-SM-5PNVG 8.7
GTEX-11GS4-3126-SM-5A5LH 8.5
GTEX-13NYS-3126-SM-5KLYV 8.5
GTEX-13OW6-3026-SM-5J2MI 8.5
GTEX-1399T-3026-SM-5KLZC 8.4
GTEX-13JUV-2926-SM-5LZX7 8.4
GTEX-R55F-1326-SM-5S2V4 8.4
GTEX-145MG-3026-SM-5RQJA 8.3
GTEX-147GR-3026-SM-5S2ML 8.3
GTEX-14A5I-2926-SM-5Q5CQ 8.3
GTEX-131YS-3126-SM-5KLYT 8.2
GTEX-11NUK-2926-SM-5A5MD 8.1
GTEX-12ZZX-2926-SM-5GCOQ 8.1
GTEX-13PL6-3126-SM-5LUAR 8.1
GTEX-14ASI-3026-SM-5S2PN 8.1
GTEX-11EI6-3026-SM-5GZZO 8.0
GTEX-11OC5-0726-SM-5P9JK 7.9
GTEX-12WSC-3026-SM-5GCNF 7.9
GTEX-13FLW-1426-SM-5K7YE 7.9
GTEX-145LS-3126-SM-5Q5BY 7.9
GTEX-11PRG-2926-SM-5987A 7.7
GTEX-13IVO-2926-SM-5L3CZ 7.6
GTEX-QMR6-1426-SM-32PLA 7.6
GTEX-RU72-3026-SM-5SI7Y 7.5
GTEX-X585-3026-SM-46MWF 7.5
GTEX-11ONC-2926-SM-5P9JM 7.3
GTEX-13NYC-2826-SM-5K7WR 7.3
GTEX-12126-1026-SM-5P9JJ 7.2
GTEX-13X6J-3026-SM-5Q5CU 7.2
GTEX-X4XX-3026-SM-3NMB2 7.2
GTEX-QVJO-1426-SM-2S1QY 7.1
GTEX-T5JC-2426-SM-3NMDB 7.1
GTEX-YFC4-3126-SM-5PNV6 7.1
GTEX-ZUA1-3026-SM-59HJC 6.9
GTEX-11DXY-3226-SM-5GIDE 6.7
GTEX-Q2AG-2926-SM-2HMJ3 6.7
GTEX-13FHP-3026-SM-5IJBS 6.6
GTEX-13O3O-3126-SM-5KM3H 6.6
GTEX-117XS-3026-SM-5N9CA 6.5
GTEX-YJ89-3026-SM-5IFJI 6.5
GTEX-ZAK1-3026-SM-5S2MJ 6.5
GTEX-111FC-3126-SM-5GZZ2 6.4
GTEX-T6MN-2626-SM-32PMQ 6.4
GTEX-WWYW-3126-SM-3NB39 6.4
GTEX-11DXW-1126-SM-5H12Q 6.3
GTEX-13O3Q-2926-SM-5KM45 6.3
GTEX-ZYFD-3026-SM-5E44C 6.3
GTEX-WHSE-3026-SM-3P5ZH 6.2
GTEX-OXRN-2426-SM-2I5EQ 6.0
GTEX-11NV4-2126-SM-5N9DS 5.9
GTEX-NPJ8-1526-SM-2D7VU 5.8
GTEX-Y8DK-0826-SM-4TT3T 5.8
GTEX-11O72-2926-SM-5BC4V 5.7
GTEX-145MH-3026-SM-5Q5DZ 5.7
GTEX-ZAJG-3126-SM-5HL9J 5.7
GTEX-XOTO-3026-SM-4B65M 5.6
GTEX-WZTO-2926-SM-3NM9I 5.5
GTEX-WVLH-3026-SM-3MJG9 5.4
GTEX-12WSH-3026-SM-5CVNI 5.3
GTEX-13FXS-3126-SM-5J2NN 5.3
GTEX-RNOR-2326-SM-2TF4I 5.3
GTEX-11ZUS-2926-SM-5FQSL 5.2
GTEX-14BMV-3026-SM-5S2PQ 5.2
GTEX-T2IS-3026-SM-32QPM 5.1
GTEX-TSE9-3026-SM-3DB76 5.1
GTEX-1313W-3126-SM-5LZUI 5.0
GTEX-11OF3-2926-SM-5HL78 4.8
GTEX-13VXU-2926-SM-5LU5C 4.5
GTEX-13SLX-3126-SM-5S2Q5 4.1
GTEX-Z93S-2926-SM-57WB9 3.8
GTEX-WL46-2926-SM-3LK82 3.6
GTEX-UTHO-3026-SM-3GAFB 3.3
GTEX-PVOW-2526-SM-2XCF7 2.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.5
Samples: 108

Max RPKM: 19.6
Min RPKM: 1.5
Std RPKM: 3.3
Median RPKM: 6.9
GTEX-13JVG-0011-R10b-SM-5KM2P 19.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 19.2
GTEX-12WSD-0011-R10b-SM-5GU79 17.7
GTEX-ZV68-0011-R10a-SM-51MT7 14.0
GTEX-13SLW-0011-R10a-SM-5S2UI 13.3
GTEX-13FHO-0011-R10b-SM-5J2MM 13.0
GTEX-11H98-0011-R10b-SM-5NQ98 12.8
GTEX-11WQK-0011-R10a-SM-5BC6R 12.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 12.6
GTEX-1445S-0011-R10a-SM-5PNWB 12.6
GTEX-1477Z-0011-R10b-SM-5S2RF 12.6
GTEX-131XW-0011-R10a-SM-5DUVA 12.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 12.2
GTEX-12WSA-0011-R10b-SM-5P9ET 11.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 11.4
GTEX-14753-0011-R10b-SM-5S2WE 11.2
GTEX-11WQC-0011-R10a-SM-57WCT 11.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 11.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 10.9
GTEX-13OW8-0011-R10a-SM-5L3H6 10.6
GTEX-139TS-0011-R10a-SM-5K7TU 10.1
GTEX-13O3O-0011-R10a-SM-5LUA9 9.8
GTEX-X4EP-0011-R10B-SM-4QASJ 9.6
GTEX-13JUV-0011-R10b-SM-5LZXR 9.3
GTEX-13NYS-0011-R10a-SM-5MR4S 9.2
GTEX-TSE9-0011-R10A-SM-3DB7O 9.0
GTEX-14BIL-0011-R10a-SM-5SI75 8.9
GTEX-147F4-0011-R10b-SM-5S2WC 8.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 8.7
GTEX-147GR-0011-R10b-SM-5S2UM 8.6
GTEX-XLM4-0011-R10A-SM-4AT5P 8.5
GTEX-13FXS-0011-R10a-SM-5J2MA 8.4
GTEX-RVPU-0011-R10A-SM-2XCAH 8.3
GTEX-ZVT3-0011-R10b-SM-57WB6 8.2
GTEX-13OW6-0011-R10a-SM-5L3HE 8.1
GTEX-13X6I-0011-R10a-SM-5PNWI 8.1
GTEX-ZUA1-0011-R10a-SM-51MT6 8.0
GTEX-13X6K-0011-R10a-SM-5P9JR 7.9
GTEX-13N2G-0011-R10a-SM-5MR34 7.7
GTEX-13OW7-0011-R10a-SM-5L3H3 7.7
GTEX-145LU-0011-R10a-SM-5PNWJ 7.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.4
GTEX-X261-0011-R10B-SM-4E3JT 7.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.4
GTEX-13OVL-0011-R10a-SM-5L3GS 7.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.2
GTEX-N7MT-0011-R10A-SM-2I3E1 7.2
GTEX-ZF28-0011-R10a-SM-4WWEH 7.2
GTEX-13FLW-0011-R10b-SM-5LZZF 7.1
GTEX-13NZA-0011-R10b-SM-5KM54 7.1
GTEX-T5JC-0011-R10A-SM-32PM2 7.1
GTEX-XMD1-0011-R10A-SM-4AT4A 7.1
GTEX-12126-0011-R10b-SM-5BC6T 7.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 7.0
GTEX-13G51-0011-R10b-SM-5LZYF 6.9
GTEX-13CZV-0011-R10b-SM-5LZYD 6.8
GTEX-13NYB-0011-R10a-SM-5KM43 6.8
GTEX-13QIC-0011-R10a-SM-5O9C7 6.8
GTEX-12WSF-0011-R10a-SM-5LZVH 6.7
GTEX-13N1W-0011-R10b-SM-5MR4H 6.7
GTEX-QDT8-0011-R10A-SM-32PKG 6.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 6.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 6.4
GTEX-131YS-0011-R10b-SM-5EQ5N 6.0
GTEX-P44H-0011-R10A-SM-2XCEK 6.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 5.9
GTEX-145LS-0011-R10a-SM-5PNUQ 5.9
GTEX-S7SE-0011-R10A-SM-2XCDF 5.9
GTEX-X4XX-0011-R10B-SM-46MWO 5.9
GTEX-11ZUS-0011-R10b-SM-5BC79 5.7
GTEX-12WSM-0011-R10a-SM-5DUWV 5.7
GTEX-YFC4-0011-R10a-SM-4SOK5 5.7
GTEX-YJ89-0011-R10a-SM-4SOK9 5.7
GTEX-12WSH-0011-R10a-SM-5LZUS 5.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 5.6
GTEX-13S7M-0011-R10b-SM-5PNZB 5.6
GTEX-NL4W-0011-R10A-SM-2I3DY 5.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 5.6
GTEX-QMR6-0011-R10A-SM-32PKO 5.6
GTEX-QVUS-0011-R10A-SM-3GIK3 5.6
GTEX-ZXG5-0011-R10a-SM-57WDD 5.5
GTEX-WWYW-0011-R10A-SM-3NB35 5.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 5.3
GTEX-145MG-0011-R10a-SM-5PNWG 5.3
GTEX-OXRN-0011-R10A-SM-2I5GC 5.2
GTEX-12WSC-0011-R10a-SM-5GU57 5.1
GTEX-131XH-0011-R10a-SM-5EGLJ 5.0
GTEX-N7MS-0011-R10A-SM-2HMJK 5.0
GTEX-14BIN-0011-R10a-SM-5S2UA 4.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 4.9
GTEX-13O3Q-0011-R10b-SM-5KM39 4.8
GTEX-Z93S-0011-R10a-SM-4RGNM 4.6
GTEX-OXRO-0011-R10A-SM-2I5EH 4.5
GTEX-13QJC-0011-R10a-SM-5SI63 4.4
GTEX-13SLX-0011-R10a-SM-5P9HV 4.4
GTEX-13X6J-0011-R10b-SM-5PNWA 4.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 4.4
GTEX-T6MN-0011-R10A-SM-32QP7 4.4
GTEX-13IVO-0011-R10a-SM-5LZY3 4.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 4.1
GTEX-145MH-0011-R10b-SM-5PNUK 3.9
GTEX-WZTO-0011-R10B-SM-4E3KB 3.7
GTEX-WVLH-0011-R10A-SM-3MJFM 3.5
GTEX-X585-0011-R10A-SM-46MUY 2.7
GTEX-12WSE-0011-R10b-SM-5P9JV 2.6
GTEX-1313W-0011-R10b-SM-5DUXA 2.4
GTEX-NL3H-0011-R10A-SM-2I3E9 2.1
GTEX-WL46-0011-R10A-SM-3MJFQ 1.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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