We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CSE1L
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:11.1RPKM
FANTOM5:46.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA038059

 

Antibody HPA038060

 

Antibody CAB002140

 

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

11.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 11.1
Samples: 117

Max RPKM: 24.5
Min RPKM: 3.5
Std RPKM: 3.1
Median RPKM: 11.1
GTEX-T2IS-0011-R5A-SM-32QP4 24.5
GTEX-PVOW-0011-R5A-SM-32PL7 20.8
GTEX-WWYW-0011-R5A-SM-3NB3E 17.4
GTEX-QVJO-0011-R5A-SM-2S1QM 16.5
GTEX-UTHO-0011-R5A-SM-3GIJD 16.4
GTEX-X585-0011-R5A-SM-46MVI 16.4
GTEX-131YS-0011-R5b-SM-5K7YB 15.7
GTEX-QMR6-0011-R5A-SM-32PKT 15.4
GTEX-N7MS-0011-R5a-SM-2HMK8 15.3
GTEX-T6MN-0011-R5A-SM-32QPD 15.3
GTEX-P44H-0011-R5A-SM-2XCEX 14.7
GTEX-13G51-0011-R5a-SM-5L3EB 14.6
GTEX-N7MT-0011-R5a-SM-2I3G6 14.6
GTEX-X4XX-0011-R5A-SM-46MWN 14.6
GTEX-12WSB-0011-R5b-SM-5GU67 14.5
GTEX-13X6I-0011-R5a-SM-5PNWW 14.5
GTEX-12WSA-0011-R5b-SM-5GU5I 14.4
GTEX-12WSF-0011-R5a-SM-5HL8K 14.2
GTEX-WVLH-0011-R5A-SM-3MJFW 14.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 14.1
GTEX-S7SE-0011-R5A-SM-2XCDA 14.0
GTEX-12WSC-0011-R5b-SM-5CVNS 13.9
GTEX-WZTO-0011-R5B-SM-3NMC5 13.6
GTEX-145LS-0011-R5a-SM-5SI65 13.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 13.2
GTEX-13X6K-0011-R5b-SM-5PNUE 13.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 13.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 12.9
GTEX-13X6J-0011-R5b-SM-5PNWT 12.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 12.9
GTEX-R55E-0011-R5A-SM-2TC5N 12.8
GTEX-11H98-0011-R5b-SM-57WCF 12.7
GTEX-WL46-0011-R5A-SM-3LK6V 12.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 12.6
GTEX-NL4W-0011-R5a-SM-2I3GD 12.5
GTEX-RU72-0011-R5A-SM-2TF6U 12.5
GTEX-1399T-0011-R5b-SM-5IJDK 12.4
GTEX-14BIM-0011-R5b-SM-5S2RM 12.4
GTEX-TSE9-0011-R5A-SM-3DB7J 12.3
GTEX-13NYS-0011-R5a-SM-5MR4D 12.0
GTEX-XMD1-0011-R5A-SM-4AT47 12.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 11.9
GTEX-ZUA1-0011-R5b-SM-51MTG 11.9
GTEX-1313W-0011-R5b-SM-5L3EP 11.8
GTEX-NL3H-0011-R5a-SM-2I3GB 11.8
GTEX-139TT-0011-R5b-SM-5K7W8 11.6
GTEX-11GSP-0011-R5a-SM-57WBE 11.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 11.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 11.5
GTEX-Z93S-0011-R5b-SM-4RGNI 11.5
GTEX-11NV4-0011-R5a-SM-5NQ88 11.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 11.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 11.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 11.4
GTEX-NPJ7-0011-R5a-SM-33HBK 11.4
GTEX-RVPV-0011-R5A-SM-2TF69 11.4
GTEX-13O3O-0011-R5b-SM-5KM44 11.3
GTEX-13JUV-0011-R5a-SM-5LZY5 11.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 11.1
GTEX-132Q8-0011-R5a-SM-5IJDM 11.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 11.1
GTEX-13FLV-0011-R5a-SM-5LZWT 11.0
GTEX-13SLX-0011-R5a-SM-5O9BV 11.0
GTEX-145MH-0011-R5a-SM-5P9JT 11.0
GTEX-13OW6-0011-R5a-SM-5O9BK 10.8
GTEX-14ABY-0011-R5b-SM-5SI7B 10.7
GTEX-13VXU-0011-R5a-SM-5O9D7 10.6
GTEX-13FXS-0011-R5b-SM-5LZYE 10.5
GTEX-T5JC-0011-R5A-SM-32PLK 10.5
GTEX-ZE7O-0011-R5a-SM-57WBO 10.5
GTEX-OHPN-0011-R5A-SM-2I5FF 10.4
GTEX-YFC4-0011-R5a-SM-4RGLR 10.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 10.4
GTEX-12WSD-0011-R5b-SM-5CVNG 10.3
GTEX-13OVL-0011-R5b-SM-5L3FU 10.3
GTEX-13CZV-0011-R5a-SM-5K7XA 10.2
GTEX-13OVH-0011-R5b-SM-5KM4L 10.2
GTEX-144GO-0011-R5a-SM-5PNUR 10.2
GTEX-RVPU-0011-R5A-SM-2XCAD 10.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 10.0
GTEX-13OW5-0011-R5b-SM-5L3FR 9.9
GTEX-11OF3-0011-R5a-SM-57WB4 9.7
GTEX-13S7M-0011-R5b-SM-5P9HS 9.6
GTEX-ZXG5-0011-R5b-SM-57WBN 9.6
GTEX-13JVG-0011-R5a-SM-5MR4O 9.5
GTEX-XOTO-0011-R5A-SM-4B657 9.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 9.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 9.2
GTEX-13OW7-0011-R5b-SM-5O9DM 9.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 9.1
GTEX-13FLW-0011-R5a-SM-5LZX6 9.1
GTEX-OXRN-0011-R5A-SM-2I5EF 9.0
GTEX-14BIN-0011-R5b-SM-5SI78 8.9
GTEX-13NYB-0011-R5a-SM-5MR45 8.8
GTEX-X261-0011-R5A-SM-3NMB4 8.8
GTEX-11WQC-0011-R5a-SM-5BC74 8.6
GTEX-12ZZX-0011-R5a-SM-5HL89 8.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 8.5
GTEX-139TS-0011-R5b-SM-5J2MZ 8.3
GTEX-13CIG-0011-R5b-SM-5L3F2 8.2
GTEX-ZVT3-0011-R5a-SM-51MSI 8.1
GTEX-13112-0011-R5b-SM-5DUV8 7.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 7.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 7.2
GTEX-144GL-0011-R5b-SM-5PNUJ 7.2
GTEX-ZV68-0011-R5a-SM-4YCDW 7.2
GTEX-1445S-0011-R5a-SM-5PNUS 7.1
GTEX-139T8-0011-R5b-SM-5J1MO 6.6
GTEX-13FHP-0011-R5b-SM-5LZY2 6.4
GTEX-12WSH-0011-R5b-SM-5P9F3 5.9
GTEX-S7PM-0011-R5A-SM-3NM8G 5.9
GTEX-YJ89-0011-R5a-SM-4V6GM 5.9
GTEX-13CF2-0011-R5a-SM-5LZWS 5.5
GTEX-11UD1-0011-R5b-SM-5P9FP 5.4
GTEX-1477Z-0011-R5b-SM-5PNUO 5.3
GTEX-13NZA-0011-R5b-SM-5KM4K 3.6
GTEX-145MG-0011-R5b-SM-5S2VU 3.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

46.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 46.1
FF:10164-103B2 76 years, female 53.3
FF:10379-105H1 89 years, female 38.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.