Tissue expression of STX16 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	44.0	TPM
GTEx:	29.6	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Low
Neuronal cells:	Medium
Neuropil:	Low

Antibody staining	Antibody HPA041019	Antibody HPA042033
Endothelial cells	Low	Not detected
Glial cells	Low	Not detected
Neuronal cells	High	Medium
Neuropil	Low	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	44.0

Male, age 5

Sample 1
TPM: 31.2

Female, age 40

Sample 2
TPM: 53.8

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 47.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	29.6

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 30.7

Samples: 114

Max RPKM: 58.3
Min RPKM: 16.5
Std RPKM: 6.8
Median RPKM: 29.4

GTEX-13G51-3026-SM-5IJB8

58.3

GTEX-UTHO-3026-SM-3GAFB

52.3

GTEX-11OF3-2926-SM-5HL78

51.4

GTEX-13OW8-2826-SM-5L3GC

45.8

GTEX-12ZZY-3026-SM-5GCOU

42.6

GTEX-111FC-3126-SM-5GZZ2

42.5

GTEX-1192X-3126-SM-5N9BY

41.7

GTEX-NPJ8-1526-SM-2D7VU

41.5

Show all

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 28.4

Samples: 108

Max RPKM: 45.9
Min RPKM: 14.8
Std RPKM: 6.1
Median RPKM: 27.9

GTEX-WWYW-0011-R10A-SM-3NB35

45.9

GTEX-13CZV-0011-R10b-SM-5LZYD

42.8

GTEX-X4EP-0011-R10B-SM-4QASJ

42.0

GTEX-QDT8-0011-R10A-SM-32PKG

40.3

GTEX-X4XX-0011-R10B-SM-46MWO

40.3

GTEX-12WSH-0011-R10a-SM-5LZUS

39.9

GTEX-NPJ8-0011-R10A-SM-2YUMO

39.9

GTEX-14BIL-0011-R10a-SM-5SI75

37.5

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue