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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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GNMT
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

GNMT

Gene description

Glycine N-methyltransferase

Protein class

Disease related genes
Enzymes
Potential drug targets
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Group enriched (liver, pancreas, prostate)
GTEx:Group enriched (pancreas, liver)
FANTOM5:Group enriched (pancreas, liver)

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression mainly in liver and exocrine pancreas.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA027501
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Pancreas

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (liver, pancreas, prostate)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (pancreas, liver)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (pancreas, liver)

GENE INFORMATION

Gene name

GNMT

Synonyms

Description

Glycine N-methyltransferase (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is an enzyme that catalyzes the conversion of S-adenosyl-L-methionine (along with glycine) to S-adenosyl-L-homocysteine and sarcosine. The encoded protein is found in the cytoplasm and acts as a homotetramer. Defects in this gene are a cause of GNMT deficiency (hypermethioninemia). [provided by RefSeq, Oct 2008]

Chromosome

6

Cytoband

p21.1

Chromosome location (bp)

42960758 - 42963880

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000124713 (version 83.38)

Entrez gene

27232

UniProt

Q14749 (UniProt - Evidence at protein level)

neXtProt

NX_Q14749

Antibodypedia

GNMT antibodies

PROTEIN BROWSER

GNMT-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GNMT-001
ENSP00000361894
ENST00000372808
Q14749 [Direct mapping]
Glycine N-methyltransferase
V9HW60 [Target identity:100%; Query identity:100%]
Glycine N-methyltransferase
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Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005542 [folic acid binding]
GO:0005737 [cytoplasm]
GO:0005977 [glycogen metabolic process]
GO:0006111 [regulation of gluconeogenesis]
GO:0006464 [cellular protein modification process]
GO:0006555 [methionine metabolic process]
GO:0006730 [one-carbon metabolic process]
GO:0016594 [glycine binding]
GO:0017174 [glycine N-methyltransferase activity]
GO:0032259 [methylation]
GO:0046500 [S-adenosylmethionine metabolic process]
GO:0051289 [protein homotetramerization]
Show all
295 aa
32.7 kDa
No 0

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