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Gene name

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Method

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Cell type

Expression

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Specificity

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Detectable

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Score

Score

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SOX9
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:58.2TPM
GTEx:30.0RPKM
FANTOM5:234.4Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Medium
Leydig cells:Not detected
 

Antibody staining

Antibody HPA001758

 

Antibody CAB022456

 

Antibody CAB068240

 

Cells in seminiferous ducts

Medium   Medium   Medium  

Leydig cells

Not detected   Not detected   Not detected  
     
     
     

TESTIS - HPA RNA-seq

Average TPM

58.2

overview Male, age 56
Sample 1
TPM: 78.7
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 65.3
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 62.4
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 84.3
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 56.8
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 42.6
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 43.7
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 38.1
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 54.5
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 55.6
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

30.0

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 30.0
Samples: 172

Max RPKM: 57.3
Min RPKM: 8.2
Std RPKM: 9.2
Median RPKM: 29.8
GTEX-WFON-2026-SM-4LVMW 57.3
GTEX-OIZI-0126-SM-3NB13 56.3
GTEX-ZTX8-1126-SM-51MRM 52.9
GTEX-WFG8-1926-SM-4LVM1 52.5
GTEX-YB5E-1926-SM-5IFIG 51.2
GTEX-14A6H-2326-SM-5Q5B5 49.1
GTEX-11P7K-1026-SM-5HL6Y 46.6
GTEX-13FTW-1326-SM-5LZZD 44.5
GTEX-O5YT-2126-SM-3MJGD 44.2
GTEX-RN64-2326-SM-48FDW 43.9
GTEX-ZAB4-0126-SM-5CVMG 43.5
GTEX-XMK1-2026-SM-4B65K 42.9
GTEX-QMRM-1526-SM-4R1K6 42.6
GTEX-ZDTT-2026-SM-5K7TY 42.4
GTEX-147F4-0626-SM-5LUAK 42.3
GTEX-QLQW-1026-SM-447A9 41.7
GTEX-XGQ4-2026-SM-4AT6G 41.6
GTEX-YJ89-0626-SM-4TT3Z 41.5
GTEX-12WSH-0326-SM-5GCNH 41.4
GTEX-R55E-0726-SM-48FCZ 41.4
GTEX-12C56-1426-SM-5FQSW 41.1
GTEX-WHSB-2126-SM-4M1XF 40.7
GTEX-13OVH-0726-SM-5N9BU 40.6
GTEX-YF7O-2026-SM-4W1YE 39.9
GTEX-XPT6-1626-SM-4B655 39.8
GTEX-144GN-1626-SM-5Q5BU 39.7
GTEX-11TT1-2226-SM-5GU6B 39.4
GTEX-Y9LG-1726-SM-4VBQE 39.3
GTEX-11ONC-2226-SM-5HL6D 39.2
GTEX-S33H-0126-SM-4AD62 39.2
GTEX-13O21-1226-SM-5J2MK 39.0
GTEX-ZUA1-2726-SM-59HLJ 38.7
GTEX-Y8E4-2226-SM-5LU94 38.6
GTEX-XPVG-2226-SM-4B65U 38.4
GTEX-1399Q-2826-SM-5IJEZ 38.3
GTEX-139T6-1226-SM-5IFFC 38.1
GTEX-RWSA-2426-SM-47JXR 38.1
GTEX-YFCO-1726-SM-4W21S 37.7
GTEX-U3ZH-1526-SM-4DXV1 37.5
GTEX-13OW6-0126-SM-5IJGM 37.2
GTEX-X261-2326-SM-4PQYU 37.2
GTEX-ZT9X-1426-SM-5DUX1 36.7
GTEX-ZT9W-2226-SM-57WFU 36.6
GTEX-PLZ5-1526-SM-3P5ZX 35.9
GTEX-13N2G-0126-SM-5N9DV 35.7
GTEX-QLQ7-1426-SM-4R1JX 35.7
GTEX-P4QS-2126-SM-3NMCF 35.4
GTEX-S3XE-1526-SM-4AD5A 35.4
GTEX-YEC4-1526-SM-4W1YU 35.3
GTEX-13O61-2026-SM-5J2M6 35.0
GTEX-U3ZM-1626-SM-4DXSK 35.0
GTEX-13NYB-2226-SM-5MR58 34.5
GTEX-YEC3-1726-SM-5IFIK 34.5
GTEX-R55D-0126-SM-48FEL 34.4
GTEX-13FLW-2126-SM-5N9FD 34.3
GTEX-QV44-1726-SM-4R1KG 34.1
GTEX-111FC-1926-SM-5GZYC 34.0
GTEX-S4Q7-1226-SM-4AD5I 33.6
GTEX-ZZ64-1126-SM-5GZXY 33.6
GTEX-12WSI-2126-SM-5GCMV 33.5
GTEX-ZYT6-2726-SM-5GICP 33.5
GTEX-11O72-0726-SM-5P9GO 33.3
GTEX-11DXZ-2126-SM-59881 33.2
GTEX-12696-0226-SM-5EGL3 33.0
GTEX-11WQK-2826-SM-5EQKH 32.8
GTEX-11P82-1526-SM-5BC5M 32.7
GTEX-SNMC-1026-SM-4DM7K 32.5
GTEX-111CU-1726-SM-5EGHM 32.2
GTEX-R55C-1426-SM-48FED 32.1
GTEX-VJYA-1426-SM-4KL1Y 32.1
GTEX-ZDYS-1326-SM-5IJFF 32.1
GTEX-13NZA-2526-SM-5IJFX 32.0
GTEX-111YS-2026-SM-5EGGL 31.8
GTEX-11OF3-1826-SM-5987N 31.7
GTEX-TKQ2-1526-SM-4DXUN 31.6
GTEX-U4B1-1526-SM-4DXSL 31.6
GTEX-13NZB-2026-SM-5MR4M 31.4
GTEX-11NSD-1026-SM-5N9BE 31.1
GTEX-ZV7C-2026-SM-5NQ8F 31.0
GTEX-ZPU1-2126-SM-57WED 30.9
GTEX-WZTO-0326-SM-4PQYZ 30.5
GTEX-ZQUD-2026-SM-51MSM 30.3
GTEX-139TT-2226-SM-5LZWO 30.2
GTEX-Q2AI-1226-SM-48U14 30.2
GTEX-RM2N-1326-SM-48FCW 29.9
GTEX-XBED-2026-SM-4AT5D 29.9
GTEX-SUCS-1326-SM-4DM5T 29.8
GTEX-ZA64-1626-SM-5CVME 29.8
GTEX-ZVTK-0126-SM-57WDG 29.4
GTEX-132QS-1226-SM-5P9GD 29.1
GTEX-11EQ9-1926-SM-5PNVV 28.8
GTEX-145MH-2326-SM-5O9AW 28.8
GTEX-11EI6-2226-SM-5EGJM 28.7
GTEX-XBEC-0126-SM-4GIDT 28.5
GTEX-11EQ8-1426-SM-5EGJR 28.3
GTEX-1339X-1926-SM-5PNVP 28.3
GTEX-S7SE-0326-SM-4AT5Q 28.3
GTEX-T8EM-0126-SM-4DM5R 28.3
GTEX-Y5V6-1726-SM-4VDSZ 28.2
GTEX-PW2O-1426-SM-48TCD 28.1
GTEX-1212Z-0326-SM-5FQSJ 27.6
GTEX-ZVZP-2226-SM-57WBF 27.6
GTEX-WOFM-1126-SM-4OOSB 27.5
GTEX-X3Y1-2626-SM-4PQZI 27.5
GTEX-OXRL-2126-SM-3NM98 27.4
GTEX-ZAB5-2426-SM-5CVMW 26.8
GTEX-SNOS-1126-SM-4DM67 26.7
GTEX-WVLH-2626-SM-4MVNV 26.6
GTEX-131XE-0426-SM-5IJF4 26.5
GTEX-V955-1926-SM-4KL1L 26.5
GTEX-13111-1526-SM-5EGJX 26.4
GTEX-11GS4-2026-SM-5N9CP 26.3
GTEX-11NUK-2626-SM-5A5MB 26.0
GTEX-OHPM-2126-SM-3LK75 25.9
GTEX-Q2AH-1526-SM-48TZG 25.7
GTEX-12ZZY-0126-SM-5LZV2 25.6
GTEX-TKQ1-0926-SM-4DXU2 25.4
GTEX-XAJ8-1326-SM-47JYT 25.4
GTEX-S95S-1126-SM-4B64E 25.3
GTEX-V1D1-2126-SM-4JBH4 25.0
GTEX-13OVL-0426-SM-5IFG6 24.4
GTEX-Z93S-1726-SM-5HL8G 24.3
GTEX-147JS-0126-SM-5S2TW 23.9
GTEX-OIZH-2126-SM-3NB1P 23.9
GTEX-ZTSS-1526-SM-51MTC 23.9
GTEX-13VXU-0726-SM-5J2O7 23.7
GTEX-1399R-1626-SM-5P9GG 23.6
GTEX-144GM-0426-SM-5Q5C8 23.6
GTEX-T5JC-0726-SM-4DM55 23.4
GTEX-NFK9-0126-SM-3LK5H 23.2
GTEX-X5EB-2026-SM-4E3KA 23.2
GTEX-117XS-2026-SM-5GID1 23.0
GTEX-117YW-1526-SM-5EGGP 22.6
GTEX-145LT-0426-SM-5LUAP 21.9
GTEX-144GL-0726-SM-5LU4P 21.8
GTEX-XQ3S-2726-SM-4BOP2 21.7
GTEX-11LCK-2326-SM-5HL53 21.6
GTEX-139TS-1726-SM-5IJG5 21.5
GTEX-ZYFC-0126-SM-5GIEH 21.4
GTEX-145MO-0126-SM-5S2QU 21.1
GTEX-13OW5-2526-SM-5L3I1 21.0
GTEX-XLM4-1526-SM-4AT6D 21.0
GTEX-U8XE-0126-SM-4E3I3 20.8
GTEX-13N1W-2626-SM-5IJEP 20.3
GTEX-T6MN-2026-SM-4DM7L 20.1
GTEX-UPJH-0126-SM-4IHLL 20.0
GTEX-QV31-1126-SM-4R1K4 19.5
GTEX-S7PM-0626-SM-4AD4Q 19.5
GTEX-12WSL-2326-SM-5DUXQ 19.4
GTEX-11ZUS-2726-SM-5FQUA 19.2
GTEX-QEG4-0126-SM-48TZE 19.2
GTEX-OOBJ-2126-SM-3NB1N 19.1
GTEX-OOBK-2126-SM-3LK5T 19.1
GTEX-WK11-0326-SM-4OOS6 18.9
GTEX-REY6-0126-SM-48FDT 18.6
GTEX-WH7G-1926-SM-4LVMM 18.5
GTEX-13O1R-0726-SM-5IJEI 18.3
GTEX-11NV4-1726-SM-5N9FC 18.1
GTEX-14753-0626-SM-5Q5CY 17.4
GTEX-14ABY-0626-SM-5Q5C9 17.0
GTEX-P4QR-0226-SM-3NMCH 16.4
GTEX-U8T8-1126-SM-4DXUE 16.4
GTEX-Y111-2426-SM-4TT23 16.3
GTEX-N7MS-0126-SM-3TW8O 16.1
GTEX-QEG5-0126-SM-4R1JR 15.6
GTEX-13FHP-2826-SM-5IJFW 15.3
GTEX-12WSM-1326-SM-5GCP9 15.1
GTEX-13112-0226-SM-5P9IV 14.4
GTEX-11WQC-2326-SM-5EQKE 12.9
GTEX-11TUW-2226-SM-5EQL9 12.4
GTEX-RUSQ-2126-SM-47JXK 11.9
GTEX-111VG-1926-SM-5GIDO 8.2
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

234.4

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 234.4
FF:10096-102C6 14-64 years, male 244.0
FF:10026-101D8 34,53,86 years, male 224.9

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