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SNRPB

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:80.2TPM
GTEx:45.4RPKM
FANTOM5:28.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Chondrocytes:Medium
 

Antibody staining

Antibody HPA003482

  

Antibody CAB009610

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Not detected  

Chondrocytes

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA003482

  

Antibody CAB009610

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

80.2
N/A Female, age 80
Sample 1
TPM: 84.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 29.2
N/A Female, age 57
Sample 3
TPM: 38.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 130.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 119.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

45.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 44.7
Samples: 350

Max RPKM: 89.2
Min RPKM: 23.3
Std RPKM: 10.3
Median RPKM: 43.4
GTEX-ZYFD-0226-SM-5NQ86 89.2
GTEX-ZYVF-0226-SM-5GIEG 81.7
GTEX-X8HC-0226-SM-4E3K1 81.2
GTEX-11EMC-2826-SM-5PNY6 80.9
GTEX-13RTJ-2526-SM-5S2Q3 75.5
GTEX-1399U-2426-SM-5K7XB 74.8
GTEX-139YR-2426-SM-5J1OB 74.5
GTEX-POMQ-2326-SM-5S2VS 69.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 46.4
Samples: 227

Max RPKM: 120.9
Min RPKM: 17.8
Std RPKM: 14.9
Median RPKM: 43.6
GTEX-11WQK-1526-SM-5EGKN 120.9
GTEX-ZYVF-1026-SM-5E44V 116.1
GTEX-Y114-1326-SM-4TT9A 107.5
GTEX-Y5LM-0826-SM-4VDSW 89.0
GTEX-13X6H-1726-SM-5Q5EH 86.6
GTEX-13PVQ-2226-SM-5L3G9 86.4
GTEX-132QS-0826-SM-5K7WV 84.2
GTEX-1399S-1426-SM-5PNYQ 80.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

28.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 28.2
FF:10010-101C1 65,65,76 years, mixed 28.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.