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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:49.7TPM
GTEx:14.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA003474

 

Antibody CAB000328

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Low  

Neuropil

Not detected   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

49.7

N/A Male, age 5
Sample 1
TPM: 45.4
overview Female, age 40
Sample 2
TPM: 64.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 38.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

14.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 13.9
Samples: 114

Max RPKM: 26.7
Min RPKM: 9.6
Std RPKM: 2.6
Median RPKM: 13.3
GTEX-11OF3-2926-SM-5HL78 26.7
GTEX-13NYS-3126-SM-5KLYV 23.3
GTEX-ZAJG-3126-SM-5HL9J 21.7
GTEX-13IVO-2926-SM-5L3CZ 20.6
GTEX-X4XX-3026-SM-3NMB2 19.7
GTEX-1192X-3126-SM-5N9BY 19.1
GTEX-13G51-3026-SM-5IJB8 18.3
GTEX-13NYC-2826-SM-5K7WR 18.2
GTEX-NPJ8-1526-SM-2D7VU 17.7
GTEX-X585-3026-SM-46MWF 17.7
GTEX-N7MT-1126-SM-5SI7V 17.4
GTEX-13FXS-3126-SM-5J2NN 17.2
GTEX-ZZPT-3026-SM-5GZXH 17.2
GTEX-12WSH-3026-SM-5CVNI 17.0
GTEX-12ZZY-3026-SM-5GCOU 16.8
GTEX-11O72-2926-SM-5BC4V 16.7
GTEX-132Q8-3026-SM-5PNVG 16.4
GTEX-UTHO-3026-SM-3GAFB 16.2
GTEX-111FC-3126-SM-5GZZ2 16.0
GTEX-WWYW-3126-SM-3NB39 16.0
GTEX-13OVH-3026-SM-5MR4N 15.8
GTEX-1128S-2726-SM-5H12C 15.7
GTEX-T5JC-2426-SM-3NMDB 15.7
GTEX-13OW6-3026-SM-5J2MI 14.9
GTEX-145LS-3126-SM-5Q5BY 14.9
GTEX-YFC4-3126-SM-5PNV6 14.9
GTEX-QVUS-2826-SM-3GADB 14.7
GTEX-13PL6-3126-SM-5LUAR 14.6
GTEX-11DXY-3226-SM-5GIDE 14.5
GTEX-ZVT3-3026-SM-5E43N 14.4
GTEX-145MG-3026-SM-5RQJA 14.3
GTEX-R55F-1326-SM-5S2V4 14.3
GTEX-11ONC-2926-SM-5P9JM 14.2
GTEX-1445S-3026-SM-5O9BR 14.2
GTEX-144FL-3026-SM-5O99C 14.2
GTEX-14ASI-3026-SM-5S2PN 14.2
GTEX-12ZZX-2926-SM-5GCOQ 14.1
GTEX-13FHP-3026-SM-5IJBS 14.1
GTEX-13JVG-3126-SM-5L3FH 14.1
GTEX-14BMV-3026-SM-5S2PQ 14.1
GTEX-13FHO-3026-SM-5J1O9 14.0
GTEX-ZAK1-3026-SM-5S2MJ 14.0
GTEX-11GSO-2926-SM-5HL73 13.8
GTEX-14A5I-2926-SM-5Q5CQ 13.8
GTEX-ZYFD-3026-SM-5E44C 13.8
GTEX-11EI6-3026-SM-5GZZO 13.7
GTEX-11OC5-0726-SM-5P9JK 13.6
GTEX-1313W-3126-SM-5LZUI 13.6
GTEX-13QIC-2926-SM-5J2NF 13.6
GTEX-XLM4-3026-SM-4AT6L 13.6
GTEX-11EMC-3226-SM-5EGKW 13.5
GTEX-12ZZZ-3026-SM-5BC67 13.5
GTEX-QVJO-1426-SM-2S1QY 13.5
GTEX-RU72-3026-SM-5SI7Y 13.5
GTEX-RNOR-2326-SM-2TF4I 13.4
GTEX-11WQK-3026-SM-5EQL6 13.3
GTEX-145MH-3026-SM-5Q5DZ 13.3
GTEX-T6MN-2626-SM-32PMQ 13.3
GTEX-13O3O-3126-SM-5KM3H 13.2
GTEX-13OW8-2826-SM-5L3GC 13.2
GTEX-13S7M-3126-SM-5RQJQ 13.2
GTEX-OXRN-2426-SM-2I5EQ 13.2
GTEX-ZE7O-3126-SM-5HL5X 13.2
GTEX-13OVJ-2826-SM-5L3GW 13.1
GTEX-1117F-3226-SM-5N9CT 13.0
GTEX-12126-1026-SM-5P9JJ 13.0
GTEX-139T8-1026-SM-5J2MC 13.0
GTEX-13X6K-2926-SM-5Q5D5 13.0
GTEX-117XS-3026-SM-5N9CA 12.9
GTEX-12WSC-3026-SM-5GCNF 12.9
GTEX-QDT8-2926-SM-32PKC 12.8
GTEX-1399T-3026-SM-5KLZC 12.7
GTEX-13NYB-3026-SM-5IJD7 12.6
GTEX-145MF-2726-SM-5O995 12.6
GTEX-Z93S-2926-SM-57WB9 12.6
GTEX-13SLX-3126-SM-5S2Q5 12.5
GTEX-XOTO-3026-SM-4B65M 12.5
GTEX-Y8DK-0826-SM-4TT3T 12.5
GTEX-11NUK-2926-SM-5A5MD 12.4
GTEX-131YS-3126-SM-5KLYT 12.4
GTEX-13OW7-3026-SM-5L3GY 12.4
GTEX-11GSP-3226-SM-5986O 12.3
GTEX-12ZZW-2926-SM-5LZUP 12.3
GTEX-13VXU-2926-SM-5LU5C 12.3
GTEX-13X6J-3026-SM-5Q5CU 12.3
GTEX-Q2AG-2926-SM-2HMJ3 12.3
GTEX-WZTO-2926-SM-3NM9I 12.3
GTEX-11DXW-1126-SM-5H12Q 12.2
GTEX-11TTK-2926-SM-5PNYP 12.2
GTEX-13FLW-1426-SM-5K7YE 12.2
GTEX-13O3Q-2926-SM-5KM45 12.2
GTEX-11GS4-3126-SM-5A5LH 12.1
GTEX-PVOW-2526-SM-2XCF7 12.1
GTEX-11PRG-2926-SM-5987A 12.0
GTEX-PWO3-0926-SM-2I5EY 12.0
GTEX-WL46-2926-SM-3LK82 12.0
GTEX-WVLH-3026-SM-3MJG9 12.0
GTEX-144GL-3026-SM-5Q5CW 11.9
GTEX-11ZUS-2926-SM-5FQSL 11.8
GTEX-QMR6-1426-SM-32PLA 11.8
GTEX-ZUA1-3026-SM-59HJC 11.8
GTEX-12WSD-3126-SM-5HL7P 11.7
GTEX-13JUV-2926-SM-5LZX7 11.6
GTEX-13PVQ-3026-SM-5SI93 11.6
GTEX-147GR-3026-SM-5S2ML 11.5
GTEX-YJ89-3026-SM-5IFJI 11.5
GTEX-T2IS-3026-SM-32QPM 11.2
GTEX-Y111-2726-SM-4TT3N 11.2
GTEX-TSE9-3026-SM-3DB76 10.8
GTEX-WHSE-3026-SM-3P5ZH 10.8
GTEX-131XW-3126-SM-5LZUC 10.6
GTEX-NPJ7-2726-SM-2I3FT 10.5
GTEX-12WSA-2926-SM-5EQ4D 9.9
GTEX-11NV4-2126-SM-5N9DS 9.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.3
Samples: 108

Max RPKM: 25.2
Min RPKM: 7.9
Std RPKM: 2.6
Median RPKM: 13.7
GTEX-X4EP-0011-R10B-SM-4QASJ 25.2
GTEX-13QJC-0011-R10a-SM-5SI63 23.1
GTEX-13NYS-0011-R10a-SM-5MR4S 21.0
GTEX-13N2G-0011-R10a-SM-5MR34 20.1
GTEX-X4XX-0011-R10B-SM-46MWO 20.1
GTEX-WWYW-0011-R10A-SM-3NB35 19.8
GTEX-12WSH-0011-R10a-SM-5LZUS 19.3
GTEX-NL3H-0011-R10A-SM-2I3E9 18.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 18.1
GTEX-13CZV-0011-R10b-SM-5LZYD 17.8
GTEX-XMD1-0011-R10A-SM-4AT4A 17.2
GTEX-ZF28-0011-R10a-SM-4WWEH 17.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 16.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 16.4
GTEX-X585-0011-R10A-SM-46MUY 16.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 16.1
GTEX-YFC4-0011-R10a-SM-4SOK5 16.1
GTEX-11H98-0011-R10b-SM-5NQ98 15.9
GTEX-13QIC-0011-R10a-SM-5O9C7 15.9
GTEX-13SLX-0011-R10a-SM-5P9HV 15.8
GTEX-145MH-0011-R10b-SM-5PNUK 15.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 15.6
GTEX-13IVO-0011-R10a-SM-5LZY3 15.6
GTEX-13O3O-0011-R10a-SM-5LUA9 15.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 15.5
GTEX-13OW6-0011-R10a-SM-5L3HE 15.4
GTEX-13OW7-0011-R10a-SM-5L3H3 15.4
GTEX-14BIL-0011-R10a-SM-5SI75 15.4
GTEX-NL4W-0011-R10A-SM-2I3DY 15.3
GTEX-14BIN-0011-R10a-SM-5S2UA 15.1
GTEX-13SLW-0011-R10a-SM-5S2UI 15.0
GTEX-145LS-0011-R10a-SM-5PNUQ 15.0
GTEX-13S7M-0011-R10b-SM-5PNZB 14.9
GTEX-N7MT-0011-R10A-SM-2I3E1 14.9
GTEX-13FXS-0011-R10a-SM-5J2MA 14.8
GTEX-147GR-0011-R10b-SM-5S2UM 14.7
GTEX-11WQC-0011-R10a-SM-57WCT 14.5
GTEX-13JUV-0011-R10b-SM-5LZXR 14.5
GTEX-OXRO-0011-R10A-SM-2I5EH 14.5
GTEX-12WSF-0011-R10a-SM-5LZVH 14.3
GTEX-13N1W-0011-R10b-SM-5MR4H 14.3
GTEX-13X6K-0011-R10a-SM-5P9JR 14.3
GTEX-145MG-0011-R10a-SM-5PNWG 14.3
GTEX-13O3Q-0011-R10b-SM-5KM39 14.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 14.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 13.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 13.9
GTEX-13JVG-0011-R10b-SM-5KM2P 13.9
GTEX-145LU-0011-R10a-SM-5PNWJ 13.9
GTEX-12WSM-0011-R10a-SM-5DUWV 13.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 13.8
GTEX-13FLW-0011-R10b-SM-5LZZF 13.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 13.7
GTEX-T6MN-0011-R10A-SM-32QP7 13.7
GTEX-YJ89-0011-R10a-SM-4SOK9 13.7
GTEX-12WSC-0011-R10a-SM-5GU57 13.6
GTEX-OXRN-0011-R10A-SM-2I5GC 13.6
GTEX-13NYB-0011-R10a-SM-5KM43 13.5
GTEX-13X6I-0011-R10a-SM-5PNWI 13.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 13.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 13.3
GTEX-13FHO-0011-R10b-SM-5J2MM 13.3
GTEX-S7SE-0011-R10A-SM-2XCDF 13.3
GTEX-WVLH-0011-R10A-SM-3MJFM 13.3
GTEX-X261-0011-R10B-SM-4E3JT 13.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 13.3
GTEX-1313W-0011-R10b-SM-5DUXA 13.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 13.2
GTEX-QVUS-0011-R10A-SM-3GIK3 13.1
GTEX-XLM4-0011-R10A-SM-4AT5P 13.1
GTEX-12WSE-0011-R10b-SM-5P9JV 13.0
GTEX-13OVL-0011-R10a-SM-5L3GS 13.0
GTEX-1445S-0011-R10a-SM-5PNWB 13.0
GTEX-N7MS-0011-R10A-SM-2HMJK 13.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 13.0
GTEX-T5JC-0011-R10A-SM-32PM2 13.0
GTEX-ZUA1-0011-R10a-SM-51MT6 13.0
GTEX-131YS-0011-R10b-SM-5EQ5N 12.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.9
GTEX-13X6J-0011-R10b-SM-5PNWA 12.9
GTEX-13G51-0011-R10b-SM-5LZYF 12.6
GTEX-13OW8-0011-R10a-SM-5L3H6 12.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 12.6
GTEX-131XH-0011-R10a-SM-5EGLJ 12.5
GTEX-WZTO-0011-R10B-SM-4E3KB 12.5
GTEX-QMR6-0011-R10A-SM-32PKO 12.4
GTEX-Z93S-0011-R10a-SM-4RGNM 12.3
GTEX-11ZUS-0011-R10b-SM-5BC79 12.2
GTEX-12WSA-0011-R10b-SM-5P9ET 12.2
GTEX-ZVT3-0011-R10b-SM-57WB6 12.2
GTEX-12WSD-0011-R10b-SM-5GU79 12.1
GTEX-147F4-0011-R10b-SM-5S2WC 12.1
GTEX-12126-0011-R10b-SM-5BC6T 11.9
GTEX-1477Z-0011-R10b-SM-5S2RF 11.9
GTEX-P44H-0011-R10A-SM-2XCEK 11.9
GTEX-WL46-0011-R10A-SM-3MJFQ 11.9
GTEX-11WQK-0011-R10a-SM-5BC6R 11.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.8
GTEX-RVPU-0011-R10A-SM-2XCAH 11.7
GTEX-QDT8-0011-R10A-SM-32PKG 11.6
GTEX-139TS-0011-R10a-SM-5K7TU 11.3
GTEX-TSE9-0011-R10A-SM-3DB7O 11.2
GTEX-ZXG5-0011-R10a-SM-57WDD 11.2
GTEX-ZV68-0011-R10a-SM-51MT7 11.1
GTEX-13NZA-0011-R10b-SM-5KM54 10.3
GTEX-131XW-0011-R10a-SM-5DUVA 9.2
GTEX-14753-0011-R10b-SM-5S2WE 7.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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