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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:41.2RPKM
FANTOM5:131.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:Medium
 

Antibody staining

Antibody HPA000798

 

Antibody HPA052504

 

Glial cells

High   Not detected  

Neuronal cells

Medium   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

41.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 41.2
Samples: 117

Max RPKM: 156.8
Min RPKM: 9.7
Std RPKM: 21.2
Median RPKM: 36.7
GTEX-12WSA-0011-R5b-SM-5GU5I 156.8
GTEX-X4XX-0011-R5A-SM-46MWN 140.5
GTEX-WL46-0011-R5A-SM-3LK6V 102.8
GTEX-XMD1-0011-R5A-SM-4AT47 86.9
GTEX-QMR6-0011-R5A-SM-32PKT 86.3
GTEX-N7MS-0011-R5a-SM-2HMK8 77.8
GTEX-13X6I-0011-R5a-SM-5PNWW 71.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 69.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 67.5
GTEX-13OVH-0011-R5b-SM-5KM4L 65.8
GTEX-13FLV-0011-R5a-SM-5LZWT 64.7
GTEX-X585-0011-R5A-SM-46MVI 63.7
GTEX-13OW6-0011-R5a-SM-5O9BK 60.9
GTEX-XOTO-0011-R5A-SM-4B657 59.3
GTEX-13JVG-0011-R5a-SM-5MR4O 59.0
GTEX-144GO-0011-R5a-SM-5PNUR 58.5
GTEX-WWYW-0011-R5A-SM-3NB3E 57.8
GTEX-12WSB-0011-R5b-SM-5GU67 56.9
GTEX-PVOW-0011-R5A-SM-32PL7 55.7
GTEX-RVPV-0011-R5A-SM-2TF69 54.7
GTEX-132Q8-0011-R5a-SM-5IJDM 54.6
GTEX-13NYB-0011-R5a-SM-5MR45 52.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 52.4
GTEX-R55E-0011-R5A-SM-2TC5N 52.1
GTEX-WZTO-0011-R5B-SM-3NMC5 51.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 50.7
GTEX-139TS-0011-R5b-SM-5J2MZ 50.4
GTEX-11NV4-0011-R5a-SM-5NQ88 50.3
GTEX-Z93S-0011-R5b-SM-4RGNI 48.3
GTEX-OHPN-0011-R5A-SM-2I5FF 47.7
GTEX-13O3O-0011-R5b-SM-5KM44 47.5
GTEX-13X6K-0011-R5b-SM-5PNUE 46.9
GTEX-NL3H-0011-R5a-SM-2I3GB 45.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 45.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 44.8
GTEX-145LS-0011-R5a-SM-5SI65 44.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 44.1
GTEX-YFC4-0011-R5a-SM-4RGLR 44.1
GTEX-14BIN-0011-R5b-SM-5SI78 44.0
GTEX-13FXS-0011-R5b-SM-5LZYE 43.2
GTEX-11GSP-0011-R5a-SM-57WBE 42.7
GTEX-ZXG5-0011-R5b-SM-57WBN 42.0
GTEX-NL4W-0011-R5a-SM-2I3GD 41.7
GTEX-11WQC-0011-R5a-SM-5BC74 41.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 41.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40.8
GTEX-12WSF-0011-R5a-SM-5HL8K 40.2
GTEX-QVJO-0011-R5A-SM-2S1QM 40.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 39.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 39.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 39.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 38.9
GTEX-13OW7-0011-R5b-SM-5O9DM 38.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 37.7
GTEX-ZUA1-0011-R5b-SM-51MTG 37.7
GTEX-ZVT3-0011-R5a-SM-51MSI 37.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 36.8
GTEX-13112-0011-R5b-SM-5DUV8 36.7
GTEX-144GL-0011-R5b-SM-5PNUJ 36.7
GTEX-13OVL-0011-R5b-SM-5L3FU 36.6
GTEX-WVLH-0011-R5A-SM-3MJFW 36.6
GTEX-ZE7O-0011-R5a-SM-57WBO 36.5
GTEX-11H98-0011-R5b-SM-57WCF 36.0
GTEX-12WSD-0011-R5b-SM-5CVNG 34.8
GTEX-13FLW-0011-R5a-SM-5LZX6 34.4
GTEX-13CF2-0011-R5a-SM-5LZWS 34.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 34.0
GTEX-1399T-0011-R5b-SM-5IJDK 33.9
GTEX-1445S-0011-R5a-SM-5PNUS 33.6
GTEX-S7SE-0011-R5A-SM-2XCDA 33.6
GTEX-RU72-0011-R5A-SM-2TF6U 33.5
GTEX-N7MT-0011-R5a-SM-2I3G6 33.2
GTEX-13OW5-0011-R5b-SM-5L3FR 33.1
GTEX-13FHP-0011-R5b-SM-5LZY2 32.6
GTEX-13S7M-0011-R5b-SM-5P9HS 32.3
GTEX-RVPU-0011-R5A-SM-2XCAD 32.1
GTEX-13SLX-0011-R5a-SM-5O9BV 31.9
GTEX-14BIM-0011-R5b-SM-5S2RM 31.8
GTEX-12WSH-0011-R5b-SM-5P9F3 31.3
GTEX-13G51-0011-R5a-SM-5L3EB 31.2
GTEX-13JUV-0011-R5a-SM-5LZY5 31.2
GTEX-UTHO-0011-R5A-SM-3GIJD 29.8
GTEX-131YS-0011-R5b-SM-5K7YB 29.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 29.2
GTEX-12ZZX-0011-R5a-SM-5HL89 28.8
GTEX-TSE9-0011-R5A-SM-3DB7J 28.1
GTEX-13VXU-0011-R5a-SM-5O9D7 28.0
GTEX-ZV68-0011-R5a-SM-4YCDW 27.6
GTEX-13NYS-0011-R5a-SM-5MR4D 27.4
GTEX-X261-0011-R5A-SM-3NMB4 27.3
GTEX-13CZV-0011-R5a-SM-5K7XA 27.1
GTEX-14ABY-0011-R5b-SM-5SI7B 27.1
GTEX-139T8-0011-R5b-SM-5J1MO 27.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 26.8
GTEX-11OF3-0011-R5a-SM-57WB4 26.3
GTEX-P44H-0011-R5A-SM-2XCEX 25.7
GTEX-145MH-0011-R5a-SM-5P9JT 25.2
GTEX-1477Z-0011-R5b-SM-5PNUO 24.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 24.7
GTEX-OXRN-0011-R5A-SM-2I5EF 24.6
GTEX-T5JC-0011-R5A-SM-32PLK 24.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 24.3
GTEX-NPJ7-0011-R5a-SM-33HBK 23.8
GTEX-T6MN-0011-R5A-SM-32QPD 23.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 23.7
GTEX-S7PM-0011-R5A-SM-3NM8G 22.7
GTEX-12WSC-0011-R5b-SM-5CVNS 22.0
GTEX-139TT-0011-R5b-SM-5K7W8 21.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 21.4
GTEX-11UD1-0011-R5b-SM-5P9FP 20.0
GTEX-13X6J-0011-R5b-SM-5PNWT 20.0
GTEX-1313W-0011-R5b-SM-5L3EP 19.5
GTEX-YJ89-0011-R5a-SM-4V6GM 19.0
GTEX-13CIG-0011-R5b-SM-5L3F2 17.8
GTEX-145MG-0011-R5b-SM-5S2VU 16.4
GTEX-13NZA-0011-R5b-SM-5KM4K 16.3
GTEX-T2IS-0011-R5A-SM-32QP4 9.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

131.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 131.9
FF:10164-103B2 76 years, female 175.1
FF:10379-105H1 89 years, female 88.6

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