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HSPA2
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:96.7TPM
GTEx:27.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:High
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA000798

 

Antibody HPA052504

 

Endothelial cells

Medium   Not detected  

Glial cells

High   Not detected  

Neuronal cells

Medium   Not detected  

Neuropil

Medium   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

96.7

N/A Male, age 5
Sample 1
TPM: 105.3
overview Female, age 40
Sample 2
TPM: 78.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 106.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

27.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 30.2
Samples: 114

Max RPKM: 168.1
Min RPKM: 7.4
Std RPKM: 22.4
Median RPKM: 23.2
GTEX-13G51-3026-SM-5IJB8 168.1
GTEX-1192X-3126-SM-5N9BY 106.3
GTEX-12ZZY-3026-SM-5GCOU 87.3
GTEX-11GS4-3126-SM-5A5LH 87.1
GTEX-N7MT-1126-SM-5SI7V 80.2
GTEX-13FHO-3026-SM-5J1O9 70.6
GTEX-NPJ8-1526-SM-2D7VU 67.2
GTEX-QVUS-2826-SM-3GADB 66.8
GTEX-13OW8-2826-SM-5L3GC 66.2
GTEX-13FHP-3026-SM-5IJBS 64.3
GTEX-11ONC-2926-SM-5P9JM 60.1
GTEX-13NYB-3026-SM-5IJD7 59.0
GTEX-111FC-3126-SM-5GZZ2 53.6
GTEX-1313W-3126-SM-5LZUI 52.4
GTEX-UTHO-3026-SM-3GAFB 51.3
GTEX-13FLW-1426-SM-5K7YE 50.5
GTEX-ZZPT-3026-SM-5GZXH 48.2
GTEX-12WSA-2926-SM-5EQ4D 48.1
GTEX-QDT8-2926-SM-32PKC 45.7
GTEX-13OVJ-2826-SM-5L3GW 45.3
GTEX-WL46-2926-SM-3LK82 40.5
GTEX-1445S-3026-SM-5O9BR 39.3
GTEX-13JVG-3126-SM-5L3FH 38.2
GTEX-13OVH-3026-SM-5MR4N 38.1
GTEX-XLM4-3026-SM-4AT6L 36.1
GTEX-13OW6-3026-SM-5J2MI 35.5
GTEX-XOTO-3026-SM-4B65M 34.6
GTEX-12WSD-3126-SM-5HL7P 34.2
GTEX-1117F-3226-SM-5N9CT 33.7
GTEX-11GSP-3226-SM-5986O 33.4
GTEX-144FL-3026-SM-5O99C 32.7
GTEX-11GSO-2926-SM-5HL73 32.5
GTEX-QMR6-1426-SM-32PLA 32.5
GTEX-NPJ7-2726-SM-2I3FT 32.2
GTEX-X4XX-3026-SM-3NMB2 31.6
GTEX-PWO3-0926-SM-2I5EY 31.4
GTEX-ZAJG-3126-SM-5HL9J 31.3
GTEX-YFC4-3126-SM-5PNV6 30.9
GTEX-13PVQ-3026-SM-5SI93 29.5
GTEX-Q2AG-2926-SM-2HMJ3 29.5
GTEX-145MF-2726-SM-5O995 28.9
GTEX-1399T-3026-SM-5KLZC 28.0
GTEX-13IVO-2926-SM-5L3CZ 27.4
GTEX-11DXY-3226-SM-5GIDE 27.3
GTEX-139T8-1026-SM-5J2MC 26.7
GTEX-T6MN-2626-SM-32PMQ 26.3
GTEX-11EI6-3026-SM-5GZZO 26.1
GTEX-13JUV-2926-SM-5LZX7 25.7
GTEX-13OW7-3026-SM-5L3GY 25.5
GTEX-12ZZW-2926-SM-5LZUP 25.4
GTEX-11OC5-0726-SM-5P9JK 25.3
GTEX-11TTK-2926-SM-5PNYP 24.5
GTEX-13QIC-2926-SM-5J2NF 24.2
GTEX-1128S-2726-SM-5H12C 23.9
GTEX-13X6K-2926-SM-5Q5D5 23.8
GTEX-QVJO-1426-SM-2S1QY 23.8
GTEX-12ZZZ-3026-SM-5BC67 23.3
GTEX-13NYS-3126-SM-5KLYV 23.0
GTEX-WHSE-3026-SM-3P5ZH 23.0
GTEX-117XS-3026-SM-5N9CA 22.9
GTEX-ZYFD-3026-SM-5E44C 22.8
GTEX-14BMV-3026-SM-5S2PQ 22.6
GTEX-X585-3026-SM-46MWF 22.5
GTEX-RU72-3026-SM-5SI7Y 22.2
GTEX-145LS-3126-SM-5Q5BY 21.7
GTEX-132Q8-3026-SM-5PNVG 20.6
GTEX-13NYC-2826-SM-5K7WR 20.6
GTEX-T5JC-2426-SM-3NMDB 20.3
GTEX-ZVT3-3026-SM-5E43N 20.0
GTEX-11DXW-1126-SM-5H12Q 19.8
GTEX-Y111-2726-SM-4TT3N 19.6
GTEX-13S7M-3126-SM-5RQJQ 19.1
GTEX-14A5I-2926-SM-5Q5CQ 18.4
GTEX-13FXS-3126-SM-5J2NN 18.3
GTEX-13SLX-3126-SM-5S2Q5 18.2
GTEX-ZAK1-3026-SM-5S2MJ 18.1
GTEX-11NUK-2926-SM-5A5MD 18.0
GTEX-11EMC-3226-SM-5EGKW 17.9
GTEX-ZE7O-3126-SM-5HL5X 17.9
GTEX-OXRN-2426-SM-2I5EQ 17.8
GTEX-12ZZX-2926-SM-5GCOQ 17.7
GTEX-145MG-3026-SM-5RQJA 17.7
GTEX-11WQK-3026-SM-5EQL6 17.6
GTEX-11NV4-2126-SM-5N9DS 17.4
GTEX-13O3O-3126-SM-5KM3H 16.9
GTEX-12WSH-3026-SM-5CVNI 16.5
GTEX-14ASI-3026-SM-5S2PN 16.3
GTEX-R55F-1326-SM-5S2V4 16.3
GTEX-Y8DK-0826-SM-4TT3T 16.3
GTEX-13PL6-3126-SM-5LUAR 16.1
GTEX-12WSC-3026-SM-5GCNF 15.9
GTEX-13X6J-3026-SM-5Q5CU 15.4
GTEX-WZTO-2926-SM-3NM9I 15.3
GTEX-WWYW-3126-SM-3NB39 14.9
GTEX-131XW-3126-SM-5LZUC 14.7
GTEX-131YS-3126-SM-5KLYT 14.7
GTEX-145MH-3026-SM-5Q5DZ 14.7
GTEX-YJ89-3026-SM-5IFJI 14.7
GTEX-13VXU-2926-SM-5LU5C 14.5
GTEX-144GL-3026-SM-5Q5CW 14.5
GTEX-WVLH-3026-SM-3MJG9 14.5
GTEX-147GR-3026-SM-5S2ML 14.4
GTEX-RNOR-2326-SM-2TF4I 14.4
GTEX-ZUA1-3026-SM-59HJC 14.4
GTEX-11PRG-2926-SM-5987A 13.7
GTEX-12126-1026-SM-5P9JJ 13.6
GTEX-11ZUS-2926-SM-5FQSL 13.4
GTEX-11O72-2926-SM-5BC4V 12.9
GTEX-TSE9-3026-SM-3DB76 11.1
GTEX-13O3Q-2926-SM-5KM45 10.8
GTEX-Z93S-2926-SM-57WB9 9.3
GTEX-PVOW-2526-SM-2XCF7 8.9
GTEX-11OF3-2926-SM-5HL78 8.4
GTEX-T2IS-3026-SM-32QPM 7.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 24.1
Samples: 108

Max RPKM: 132.3
Min RPKM: 4.9
Std RPKM: 18.8
Median RPKM: 18.7
GTEX-XMD1-0011-R10A-SM-4AT4A 132.3
GTEX-13FLW-0011-R10b-SM-5LZZF 86.0
GTEX-12WSD-0011-R10b-SM-5GU79 80.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 76.3
GTEX-12WSA-0011-R10b-SM-5P9ET 73.5
GTEX-13CZV-0011-R10b-SM-5LZYD 67.4
GTEX-13X6K-0011-R10a-SM-5P9JR 51.4
GTEX-13JVG-0011-R10b-SM-5KM2P 47.4
GTEX-RVPU-0011-R10A-SM-2XCAH 46.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 44.2
GTEX-WWYW-0011-R10A-SM-3NB35 44.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 41.1
GTEX-QDT8-0011-R10A-SM-32PKG 40.4
GTEX-XLM4-0011-R10A-SM-4AT5P 38.2
GTEX-13OVL-0011-R10a-SM-5L3GS 37.4
GTEX-1445S-0011-R10a-SM-5PNWB 37.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 34.7
GTEX-13X6I-0011-R10a-SM-5PNWI 34.3
GTEX-13S7M-0011-R10b-SM-5PNZB 33.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 33.3
GTEX-X4XX-0011-R10B-SM-46MWO 32.4
GTEX-N7MT-0011-R10A-SM-2I3E1 31.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 31.9
GTEX-145LU-0011-R10a-SM-5PNWJ 31.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 30.7
GTEX-13SLW-0011-R10a-SM-5S2UI 30.4
GTEX-S7SE-0011-R10A-SM-2XCDF 29.7
GTEX-14BIL-0011-R10a-SM-5SI75 29.6
GTEX-13FHO-0011-R10b-SM-5J2MM 28.5
GTEX-YFC4-0011-R10a-SM-4SOK5 27.2
GTEX-13N2G-0011-R10a-SM-5MR34 27.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 26.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 25.8
GTEX-13G51-0011-R10b-SM-5LZYF 25.2
GTEX-1477Z-0011-R10b-SM-5S2RF 24.5
GTEX-11WQC-0011-R10a-SM-57WCT 24.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 24.1
GTEX-WVLH-0011-R10A-SM-3MJFM 23.3
GTEX-13OW8-0011-R10a-SM-5L3H6 23.1
GTEX-NL4W-0011-R10A-SM-2I3DY 23.0
GTEX-13JUV-0011-R10b-SM-5LZXR 22.9
GTEX-ZV68-0011-R10a-SM-51MT7 22.8
GTEX-P44H-0011-R10A-SM-2XCEK 22.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 22.6
GTEX-QVUS-0011-R10A-SM-3GIK3 22.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 22.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 21.3
GTEX-13QJC-0011-R10a-SM-5SI63 21.3
GTEX-13N1W-0011-R10b-SM-5MR4H 20.8
GTEX-14753-0011-R10b-SM-5S2WE 20.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 20.3
GTEX-145MG-0011-R10a-SM-5PNWG 19.6
GTEX-X585-0011-R10A-SM-46MUY 19.4
GTEX-13OW6-0011-R10a-SM-5L3HE 19.1
GTEX-139TS-0011-R10a-SM-5K7TU 18.3
GTEX-OXRN-0011-R10A-SM-2I5GC 18.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 18.3
GTEX-12WSF-0011-R10a-SM-5LZVH 18.2
GTEX-131XH-0011-R10a-SM-5EGLJ 17.7
GTEX-QMR6-0011-R10A-SM-32PKO 16.2
GTEX-145MH-0011-R10b-SM-5PNUK 16.1
GTEX-T5JC-0011-R10A-SM-32PM2 16.1
GTEX-13NYS-0011-R10a-SM-5MR4S 15.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 15.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 15.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 15.3
GTEX-11WQK-0011-R10a-SM-5BC6R 15.2
GTEX-131YS-0011-R10b-SM-5EQ5N 15.2
GTEX-12WSM-0011-R10a-SM-5DUWV 15.0
GTEX-13QIC-0011-R10a-SM-5O9C7 14.9
GTEX-11ZUS-0011-R10b-SM-5BC79 14.5
GTEX-ZF28-0011-R10a-SM-4WWEH 14.5
GTEX-147F4-0011-R10b-SM-5S2WC 14.4
GTEX-ZUA1-0011-R10a-SM-51MT6 14.4
GTEX-13FXS-0011-R10a-SM-5J2MA 14.2
GTEX-13O3O-0011-R10a-SM-5LUA9 14.2
GTEX-147GR-0011-R10b-SM-5S2UM 14.1
GTEX-WZTO-0011-R10B-SM-4E3KB 13.8
GTEX-12WSH-0011-R10a-SM-5LZUS 13.7
GTEX-ZXG5-0011-R10a-SM-57WDD 13.7
GTEX-145LS-0011-R10a-SM-5PNUQ 13.5
GTEX-11H98-0011-R10b-SM-5NQ98 12.6
GTEX-X261-0011-R10B-SM-4E3JT 12.5
GTEX-TSE9-0011-R10A-SM-3DB7O 12.3
GTEX-13OW7-0011-R10a-SM-5L3H3 11.9
GTEX-13IVO-0011-R10a-SM-5LZY3 11.8
GTEX-13NYB-0011-R10a-SM-5KM43 11.4
GTEX-131XW-0011-R10a-SM-5DUVA 11.1
GTEX-ZVT3-0011-R10b-SM-57WB6 11.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 10.5
GTEX-14BIN-0011-R10a-SM-5S2UA 10.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 10.2
GTEX-13NZA-0011-R10b-SM-5KM54 10.1
GTEX-N7MS-0011-R10A-SM-2HMJK 10.0
GTEX-12WSC-0011-R10a-SM-5GU57 9.6
GTEX-YJ89-0011-R10a-SM-4SOK9 9.6
GTEX-13X6J-0011-R10b-SM-5PNWA 9.5
GTEX-X4EP-0011-R10B-SM-4QASJ 9.3
GTEX-13O3Q-0011-R10b-SM-5KM39 9.1
GTEX-NL3H-0011-R10A-SM-2I3E9 9.0
GTEX-12126-0011-R10b-SM-5BC6T 8.7
GTEX-OXRO-0011-R10A-SM-2I5EH 8.7
GTEX-T6MN-0011-R10A-SM-32QP7 8.4
GTEX-13SLX-0011-R10a-SM-5P9HV 8.3
GTEX-Z93S-0011-R10a-SM-4RGNM 8.2
GTEX-WL46-0011-R10A-SM-3MJFQ 7.6
GTEX-12WSE-0011-R10b-SM-5P9JV 5.4
GTEX-1313W-0011-R10b-SM-5DUXA 4.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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