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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:298.2TPM
GTEx:74.1RPKM
FANTOM5:375.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA009433

 

Antibody HPA009696

 

Antibody CAB004738

 

Adipocytes

High   Low   Medium  

Glandular cells

High   Medium   High  

Myoepithelial cells

High   Medium   High  
     
     
     

BREAST - HPA RNA-seq

Average TPM

298.2

overview Female, age 52
Sample 1
TPM: 259.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 196.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 310.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 426.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

74.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 74.1
Samples: 214

Max RPKM: 124.2
Min RPKM: 38.4
Std RPKM: 14
Median RPKM: 71.9
GTEX-X261-0626-SM-3NMD9 124.2
GTEX-VJWN-0726-SM-3GIJ8 116.4
GTEX-13O3Q-2226-SM-5KM4O 115.0
GTEX-132AR-0826-SM-5EGK6 114.2
GTEX-X4XY-0926-SM-4E3JD 106.1
GTEX-XYKS-1326-SM-4BRUN 103.2
GTEX-RUSQ-2026-SM-4GIAK 102.8
GTEX-Y114-2026-SM-4TT7L 102.1
GTEX-W5X1-2326-SM-3GIL6 101.8
GTEX-WFON-1826-SM-3GILG 100.8
GTEX-13QIC-2326-SM-5LU5N 98.0
GTEX-146FH-0826-SM-5SI8T 97.1
GTEX-13S86-1226-SM-5S2OA 96.8
GTEX-ZY6K-1626-SM-5GZWV 96.2
GTEX-1211K-1926-SM-5EQLB 95.6
GTEX-R55F-1726-SM-2TF4R 93.8
GTEX-11EM3-1326-SM-5N9C6 92.8
GTEX-14E6E-1326-SM-5S2NR 92.7
GTEX-11DZ1-0326-SM-5N9BN 92.0
GTEX-TKQ2-1826-SM-33HB2 91.8
GTEX-QEG5-0726-SM-4R1JQ 91.2
GTEX-TMMY-0726-SM-33HBE 91.0
GTEX-13NZ8-0126-SM-5IJCT 90.9
GTEX-ZZPU-0626-SM-5E43T 90.8
GTEX-1314G-1226-SM-5BC6D 90.6
GTEX-Y5LM-1726-SM-4VDSX 90.4
GTEX-ZF29-1926-SM-5S2P1 90.4
GTEX-ZDYS-1126-SM-5K7UB 90.1
GTEX-S33H-0326-SM-4AD6N 89.9
GTEX-13W46-0826-SM-5LU3H 89.7
GTEX-QDT8-0626-SM-48TYW 89.3
GTEX-ZF3C-2326-SM-5S2MZ 89.3
GTEX-WI4N-1426-SM-3LK7H 89.2
GTEX-ZC5H-2626-SM-5J2MG 89.2
GTEX-WOFL-0826-SM-3MJG1 89.0
GTEX-T6MO-0326-SM-32QOK 88.7
GTEX-11TUW-1826-SM-5BC5D 88.3
GTEX-Y3IK-2326-SM-4WWDT 88.1
GTEX-13113-1726-SM-5GCOO 87.8
GTEX-U3ZH-1426-SM-4DXSR 87.6
GTEX-XUZC-1626-SM-4BRVP 87.6
GTEX-XBED-1626-SM-47JYN 87.1
GTEX-S32W-2026-SM-4AD6E 86.9
GTEX-11P81-1926-SM-5BC53 86.1
GTEX-R3RS-0626-SM-48FE1 85.8
GTEX-T2IS-1526-SM-32QPR 85.5
GTEX-REY6-2426-SM-48FF5 85.4
GTEX-13W3W-1226-SM-5LU4H 84.8
GTEX-13O3O-0826-SM-5K7WE 84.4
GTEX-11OF3-1926-SM-59889 84.2
GTEX-UTHO-1026-SM-3GAF7 84.2
GTEX-TKQ1-0226-SM-33HB5 84.0
GTEX-Y5V5-2126-SM-4WWFO 83.7
GTEX-Y3I4-1526-SM-4TT7K 83.6
GTEX-147F4-2826-SM-5NQBN 83.4
GTEX-ZTX8-1226-SM-4YCE9 83.1
GTEX-WXYG-2226-SM-4E3IM 82.1
GTEX-S4P3-1326-SM-4AD6V 81.9
GTEX-YB5K-1626-SM-5IFIN 81.9
GTEX-YJ8O-2226-SM-5IFHW 81.8
GTEX-11O72-2126-SM-5N9FO 81.4
GTEX-ZV6S-1826-SM-5NQ8D 81.1
GTEX-ZWKS-2826-SM-5NQ74 81.0
GTEX-ZV7C-1826-SM-5NQ83 80.5
GTEX-111YS-1926-SM-5GICC 80.1
GTEX-WYBS-0926-SM-3NM94 80.1
GTEX-VUSG-2226-SM-4KKZO 80.0
GTEX-Y5V6-2126-SM-4WWFX 79.9
GTEX-12WSK-2226-SM-5GCO5 79.6
GTEX-ZVE2-1226-SM-5NQ8R 79.5
GTEX-13NZ9-1026-SM-5MR5K 79.4
GTEX-SE5C-2126-SM-4BRUJ 79.2
GTEX-11DXY-2326-SM-5GICW 78.7
GTEX-TML8-1226-SM-32QON 78.7
GTEX-WYVS-1726-SM-3NMAY 78.6
GTEX-XOT4-0726-SM-4GIAW 78.6
GTEX-ZF2S-2026-SM-5E461 78.3
GTEX-XMD2-0926-SM-4WWEF 78.1
GTEX-U8XE-0826-SM-4E3J1 78.0
GTEX-ZPIC-1126-SM-5BC7F 77.9
GTEX-13CF3-2126-SM-5IFJP 77.4
GTEX-1192X-2326-SM-5987X 77.2
GTEX-ZXES-0826-SM-5E43C 76.9
GTEX-1313W-0826-SM-5EQ4T 76.5
GTEX-T5JC-2126-SM-32PMO 76.3
GTEX-13FHO-0826-SM-5L3E8 76.2
GTEX-ZVT2-1826-SM-5NQ8W 76.1
GTEX-UJHI-1426-SM-3DB9C 75.9
GTEX-R53T-1526-SM-48FEK 75.5
GTEX-ZU9S-1926-SM-5NQBP 75.4
GTEX-11NSD-0926-SM-5N9DR 75.3
GTEX-XUJ4-1926-SM-4BOOV 75.2
GTEX-1117F-2826-SM-5GZXL 75.0
GTEX-13OW5-2226-SM-5L3HC 75.0
GTEX-145ME-1526-SM-5Q5F2 74.8
GTEX-ZTTD-1026-SM-51MRD 74.8
GTEX-1122O-1226-SM-5H113 74.6
GTEX-131XW-0726-SM-5EGK3 74.3
GTEX-11P82-1326-SM-5HL62 74.2
GTEX-11WQC-1726-SM-5GU4W 73.8
GTEX-11P7K-0726-SM-5EGKX 73.7
GTEX-ZDTT-2126-SM-5S2OJ 73.7
GTEX-UPK5-2326-SM-3P5Z8 72.9
GTEX-XUW1-2326-SM-4BOO5 72.9
GTEX-YEC3-1026-SM-5IFI5 72.4
GTEX-T2YK-2226-SM-32QPT 72.2
GTEX-11ONC-2126-SM-5HL6E 72.0
GTEX-11GS4-2126-SM-5A5KR 71.8
GTEX-SIU7-1626-SM-4BRUK 71.6
GTEX-133LE-1726-SM-5K7VQ 71.4
GTEX-S4UY-0726-SM-4AD6X 71.3
GTEX-ZLV1-1426-SM-4WWES 71.3
GTEX-X4EP-2926-SM-3P5YQ 71.2
GTEX-Y8E4-1626-SM-5S2MW 71.1
GTEX-XV7Q-2326-SM-4BRVZ 71.0
GTEX-Y8LW-1626-SM-5IFHX 71.0
GTEX-13O3P-0826-SM-5L3DH 70.8
GTEX-12ZZX-1126-SM-5EGKB 70.4
GTEX-WY7C-2726-SM-3NB3P 70.2
GTEX-WYJK-1326-SM-3NB2T 70.2
GTEX-ZVTK-0326-SM-51MRR 70.1
GTEX-11ZTT-2326-SM-5EQLG 70.0
GTEX-12WSB-0626-SM-59HJO 69.6
GTEX-ZVZQ-0826-SM-51MRF 69.5
GTEX-T6MN-0726-SM-32PML 69.1
GTEX-139T6-1626-SM-5PNYZ 69.0
GTEX-X15G-1626-SM-3NMB3 68.9
GTEX-S341-1526-SM-4AD6K 68.8
GTEX-11EI6-0626-SM-5985T 68.7
GTEX-RU72-0626-SM-46MUI 68.7
GTEX-144GM-0926-SM-5O994 68.5
GTEX-S7SE-0826-SM-4AT4D 68.4
GTEX-T5JW-2026-SM-4DM63 68.4
GTEX-ZVT4-1026-SM-57WC4 68.3
GTEX-ZUA1-1526-SM-59HLS 68.0
GTEX-RWS6-1926-SM-47JXY 67.9
GTEX-XGQ4-0926-SM-4AT4U 67.9
GTEX-12WSN-1326-SM-5GCNT 67.8
GTEX-S4Q7-1126-SM-4AD6R 67.4
GTEX-13NZB-2126-SM-5MR4Y 67.3
GTEX-139TU-0626-SM-5KM3X 67.1
GTEX-ZQG8-0726-SM-5P9H9 67.1
GTEX-13O61-1826-SM-5KM4I 67.0
GTEX-ZAB4-2526-SM-5HL8M 67.0
GTEX-ZDXO-0126-SM-5S2ND 66.9
GTEX-11TT1-2126-SM-5GU5Y 66.8
GTEX-13N11-1726-SM-5J1OJ 66.8
GTEX-Q2AG-0326-SM-48U1O 66.8
GTEX-1399U-1826-SM-5PNZ1 66.4
GTEX-13OW8-0226-SM-5K7UP 66.0
GTEX-ZT9W-2026-SM-51MRA 66.0
GTEX-11ZUS-0826-SM-5FQUY 65.9
GTEX-ZYWO-2326-SM-5GZY4 65.9
GTEX-144GL-2026-SM-5LU3O 65.4
GTEX-QEL4-2126-SM-447AE 65.3
GTEX-145LT-0726-SM-5S2VM 65.2
GTEX-11GSO-1926-SM-5A5K3 65.0
GTEX-145MO-0826-SM-5NQBL 65.0
GTEX-13FTY-2226-SM-5J1ND 64.8
GTEX-QMRM-1626-SM-4R1KV 64.5
GTEX-ZZ64-1226-SM-5E43R 64.5
GTEX-U3ZN-1926-SM-4DXSG 64.3
GTEX-ZQUD-1926-SM-51MSA 63.7
GTEX-WRHU-0326-SM-3MJFY 63.6
GTEX-13FTX-1126-SM-5N9EN 63.1
GTEX-ZLFU-2126-SM-4WWEV 63.1
GTEX-ZAJG-0626-SM-5HL8X 63.0
GTEX-11WQK-2426-SM-5GU5C 62.9
GTEX-ZYT6-0126-SM-5E45J 62.6
GTEX-11EQ9-1826-SM-5Q5AJ 62.5
GTEX-Y111-2026-SM-4SOJA 62.5
GTEX-12WSM-1726-SM-5BC6J 62.4
GTEX-YFC4-1426-SM-5IFJG 62.3
GTEX-13FTW-1426-SM-5LZWZ 62.2
GTEX-1269C-2426-SM-5FQSN 62.1
GTEX-12BJ1-1826-SM-5HL9N 61.6
GTEX-ZYW4-0826-SM-5GIDG 61.4
GTEX-YFCO-1826-SM-4W1YH 61.1
GTEX-117YX-1426-SM-5H12H 61.0
GTEX-131YS-0626-SM-5EGKL 60.3
GTEX-U412-1826-SM-4DXTJ 60.2
GTEX-R55D-0826-SM-48FEA 59.8
GTEX-XQ3S-1326-SM-4BOPQ 59.5
GTEX-11DXW-0626-SM-5N9ER 59.1
GTEX-14753-2426-SM-5LU8U 58.8
GTEX-14ABY-2126-SM-5QGQZ 58.7
GTEX-ZYFC-0826-SM-5E44K 58.4
GTEX-13PL6-2926-SM-5L3I2 58.1
GTEX-ZA64-1526-SM-5CVMD 57.6
GTEX-XQ8I-2426-SM-4WAXY 57.5
GTEX-Y9LG-1426-SM-5IFJZ 57.1
GTEX-11NV4-2026-SM-5N9DG 56.9
GTEX-132NY-0826-SM-5K7Y7 56.9
GTEX-13D11-1026-SM-5IJFB 56.9
GTEX-139T8-0826-SM-5L3DE 56.4
GTEX-13N1W-0626-SM-5MR4U 56.4
GTEX-117XS-1926-SM-5GICO 56.2
GTEX-12KS4-0126-SM-5Q5A5 55.8
GTEX-14AS3-1626-SM-5S2OY 55.7
GTEX-PSDG-1626-SM-48TCQ 55.6
GTEX-ZEX8-2226-SM-57WC6 55.5
GTEX-11LCK-2426-SM-5HL5F 55.4
GTEX-11PRG-0826-SM-5EQ6A 55.3
GTEX-13CF2-2026-SM-5K7VI 54.9
GTEX-11DXZ-1926-SM-5GZZL 54.8
GTEX-11EMC-2026-SM-5A5JV 54.7
GTEX-XMK1-1126-SM-4IHJ8 54.2
GTEX-13PVQ-1026-SM-5KM3M 53.8
GTEX-11I78-2226-SM-5PNYA 53.0
GTEX-145MN-1926-SM-5SIAI 51.5
GTEX-XMD1-0826-SM-4AT52 48.4
GTEX-QVJO-1826-SM-447C9 47.5
GTEX-132Q8-1426-SM-5EGK7 47.3
GTEX-YB5E-1726-SM-5IFJ3 38.4
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

375.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 375.6
FF:10080-102A8 77 years, female 375.6

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