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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:339.8TPM
GTEx:49.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:High
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA009433

 

Antibody HPA009696

 

Antibody CAB004738

 

Endothelial cells

High   Medium   Medium  

Glial cells

High   Medium   High  

Neuronal cells

High   Medium   High  

Neuropil

Medium   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

339.8

N/A Male, age 5
Sample 1
TPM: 250.3
overview Female, age 40
Sample 2
TPM: 436.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 332.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

49.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 39.5
Samples: 114

Max RPKM: 70
Min RPKM: 24
Std RPKM: 8
Median RPKM: 38.1
GTEX-13OVJ-2826-SM-5L3GW 70.0
GTEX-13JVG-3126-SM-5L3FH 61.7
GTEX-13IVO-2926-SM-5L3CZ 59.7
GTEX-QMR6-1426-SM-32PLA 59.5
GTEX-X585-3026-SM-46MWF 55.1
GTEX-139T8-1026-SM-5J2MC 54.8
GTEX-13X6K-2926-SM-5Q5D5 54.5
GTEX-QDT8-2926-SM-32PKC 52.3
GTEX-13NYC-2826-SM-5K7WR 51.9
GTEX-144FL-3026-SM-5O99C 51.5
GTEX-11NUK-2926-SM-5A5MD 50.4
GTEX-11DXY-3226-SM-5GIDE 50.3
GTEX-11WQK-3026-SM-5EQL6 50.3
GTEX-QVUS-2826-SM-3GADB 48.9
GTEX-11GSP-3226-SM-5986O 48.4
GTEX-13NYS-3126-SM-5KLYV 47.6
GTEX-ZAK1-3026-SM-5S2MJ 47.4
GTEX-13FHO-3026-SM-5J1O9 47.2
GTEX-WZTO-2926-SM-3NM9I 47.0
GTEX-NPJ8-1526-SM-2D7VU 46.7
GTEX-PWO3-0926-SM-2I5EY 46.2
GTEX-PVOW-2526-SM-2XCF7 45.0
GTEX-12ZZZ-3026-SM-5BC67 44.9
GTEX-14A5I-2926-SM-5Q5CQ 44.6
GTEX-WHSE-3026-SM-3P5ZH 44.6
GTEX-WWYW-3126-SM-3NB39 44.4
GTEX-11EI6-3026-SM-5GZZO 44.0
GTEX-ZZPT-3026-SM-5GZXH 43.8
GTEX-RU72-3026-SM-5SI7Y 43.7
GTEX-131XW-3126-SM-5LZUC 43.1
GTEX-1399T-3026-SM-5KLZC 43.1
GTEX-13OW6-3026-SM-5J2MI 42.6
GTEX-XLM4-3026-SM-4AT6L 42.6
GTEX-12WSD-3126-SM-5HL7P 42.5
GTEX-ZE7O-3126-SM-5HL5X 42.5
GTEX-TSE9-3026-SM-3DB76 42.3
GTEX-X4XX-3026-SM-3NMB2 42.0
GTEX-13G51-3026-SM-5IJB8 41.7
GTEX-13JUV-2926-SM-5LZX7 41.4
GTEX-1192X-3126-SM-5N9BY 41.2
GTEX-11GSO-2926-SM-5HL73 41.2
GTEX-12ZZX-2926-SM-5GCOQ 41.1
GTEX-QVJO-1426-SM-2S1QY 40.7
GTEX-111FC-3126-SM-5GZZ2 40.6
GTEX-UTHO-3026-SM-3GAFB 40.6
GTEX-Y8DK-0826-SM-4TT3T 40.5
GTEX-11OC5-0726-SM-5P9JK 40.3
GTEX-13FXS-3126-SM-5J2NN 39.9
GTEX-YFC4-3126-SM-5PNV6 39.9
GTEX-13PL6-3126-SM-5LUAR 39.8
GTEX-14ASI-3026-SM-5S2PN 39.5
GTEX-14BMV-3026-SM-5S2PQ 39.3
GTEX-1128S-2726-SM-5H12C 38.8
GTEX-145LS-3126-SM-5Q5BY 38.8
GTEX-132Q8-3026-SM-5PNVG 38.6
GTEX-NPJ7-2726-SM-2I3FT 38.4
GTEX-11PRG-2926-SM-5987A 38.2
GTEX-11O72-2926-SM-5BC4V 38.0
GTEX-13OW7-3026-SM-5L3GY 38.0
GTEX-11ONC-2926-SM-5P9JM 37.6
GTEX-13PVQ-3026-SM-5SI93 37.4
GTEX-13X6J-3026-SM-5Q5CU 37.4
GTEX-13OVH-3026-SM-5MR4N 37.3
GTEX-ZUA1-3026-SM-59HJC 37.3
GTEX-131YS-3126-SM-5KLYT 37.2
GTEX-13FLW-1426-SM-5K7YE 37.0
GTEX-144GL-3026-SM-5Q5CW 37.0
GTEX-N7MT-1126-SM-5SI7V 36.8
GTEX-11TTK-2926-SM-5PNYP 36.6
GTEX-13FHP-3026-SM-5IJBS 36.4
GTEX-XOTO-3026-SM-4B65M 36.3
GTEX-OXRN-2426-SM-2I5EQ 36.2
GTEX-1445S-3026-SM-5O9BR 36.0
GTEX-12ZZY-3026-SM-5GCOU 35.9
GTEX-13QIC-2926-SM-5J2NF 35.9
GTEX-T5JC-2426-SM-3NMDB 35.9
GTEX-13NYB-3026-SM-5IJD7 35.7
GTEX-T2IS-3026-SM-32QPM 35.5
GTEX-12ZZW-2926-SM-5LZUP 35.3
GTEX-13OW8-2826-SM-5L3GC 35.2
GTEX-13S7M-3126-SM-5RQJQ 35.2
GTEX-WL46-2926-SM-3LK82 35.0
GTEX-12WSH-3026-SM-5CVNI 34.9
GTEX-13O3O-3126-SM-5KM3H 34.7
GTEX-145MH-3026-SM-5Q5DZ 34.7
GTEX-WVLH-3026-SM-3MJG9 34.5
GTEX-R55F-1326-SM-5S2V4 34.2
GTEX-1313W-3126-SM-5LZUI 34.1
GTEX-12WSA-2926-SM-5EQ4D 33.9
GTEX-ZVT3-3026-SM-5E43N 33.9
GTEX-145MG-3026-SM-5RQJA 33.8
GTEX-145MF-2726-SM-5O995 33.5
GTEX-RNOR-2326-SM-2TF4I 33.5
GTEX-ZYFD-3026-SM-5E44C 33.3
GTEX-13O3Q-2926-SM-5KM45 33.1
GTEX-11EMC-3226-SM-5EGKW 32.7
GTEX-13SLX-3126-SM-5S2Q5 32.6
GTEX-12126-1026-SM-5P9JJ 32.1
GTEX-12WSC-3026-SM-5GCNF 32.0
GTEX-11DXW-1126-SM-5H12Q 31.5
GTEX-Y111-2726-SM-4TT3N 31.4
GTEX-T6MN-2626-SM-32PMQ 31.1
GTEX-11ZUS-2926-SM-5FQSL 30.8
GTEX-13VXU-2926-SM-5LU5C 30.4
GTEX-11GS4-3126-SM-5A5LH 29.6
GTEX-117XS-3026-SM-5N9CA 28.4
GTEX-YJ89-3026-SM-5IFJI 27.8
GTEX-ZAJG-3126-SM-5HL9J 27.4
GTEX-147GR-3026-SM-5S2ML 27.2
GTEX-Q2AG-2926-SM-2HMJ3 26.9
GTEX-Z93S-2926-SM-57WB9 26.3
GTEX-11NV4-2126-SM-5N9DS 25.5
GTEX-11OF3-2926-SM-5HL78 24.6
GTEX-1117F-3226-SM-5N9CT 24.0
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 60.9
Samples: 108

Max RPKM: 127.5
Min RPKM: 31.4
Std RPKM: 14.6
Median RPKM: 58.9
GTEX-13N2G-0011-R10a-SM-5MR34 127.5
GTEX-QDT8-0011-R10A-SM-32PKG 113.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 108.2
GTEX-QVUS-0011-R10A-SM-3GIK3 88.9
GTEX-QMR6-0011-R10A-SM-32PKO 88.6
GTEX-XMD1-0011-R10A-SM-4AT4A 86.6
GTEX-P44H-0011-R10A-SM-2XCEK 82.5
GTEX-13X6K-0011-R10a-SM-5P9JR 81.9
GTEX-13FHO-0011-R10b-SM-5J2MM 80.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 78.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 78.3
GTEX-13SLW-0011-R10a-SM-5S2UI 77.2
GTEX-WWYW-0011-R10A-SM-3NB35 74.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 74.2
GTEX-X585-0011-R10A-SM-46MUY 73.8
GTEX-11H98-0011-R10b-SM-5NQ98 72.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 72.3
GTEX-WVLH-0011-R10A-SM-3MJFM 71.2
GTEX-S7SE-0011-R10A-SM-2XCDF 70.2
GTEX-13JUV-0011-R10b-SM-5LZXR 69.7
GTEX-XLM4-0011-R10A-SM-4AT5P 69.5
GTEX-13X6I-0011-R10a-SM-5PNWI 68.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 68.6
GTEX-WL46-0011-R10A-SM-3MJFQ 67.7
GTEX-NL3H-0011-R10A-SM-2I3E9 67.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 67.0
GTEX-11ZUS-0011-R10b-SM-5BC79 66.8
GTEX-T5JC-0011-R10A-SM-32PM2 66.8
GTEX-X4EP-0011-R10B-SM-4QASJ 65.7
GTEX-13OW8-0011-R10a-SM-5L3H6 65.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 65.3
GTEX-YFC4-0011-R10a-SM-4SOK5 65.3
GTEX-145MG-0011-R10a-SM-5PNWG 63.8
GTEX-13FLW-0011-R10b-SM-5LZZF 63.6
GTEX-131YS-0011-R10b-SM-5EQ5N 63.3
GTEX-T6MN-0011-R10A-SM-32QP7 63.0
GTEX-13S7M-0011-R10b-SM-5PNZB 62.8
GTEX-1445S-0011-R10a-SM-5PNWB 62.8
GTEX-11WQK-0011-R10a-SM-5BC6R 62.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 61.2
GTEX-131XH-0011-R10a-SM-5EGLJ 61.0
GTEX-13O3Q-0011-R10b-SM-5KM39 61.0
GTEX-14BIL-0011-R10a-SM-5SI75 61.0
GTEX-X4XX-0011-R10B-SM-46MWO 61.0
GTEX-12126-0011-R10b-SM-5BC6T 60.9
GTEX-12WSD-0011-R10b-SM-5GU79 60.8
GTEX-N7MT-0011-R10A-SM-2I3E1 60.8
GTEX-WZTO-0011-R10B-SM-4E3KB 60.8
GTEX-13OVL-0011-R10a-SM-5L3GS 60.7
GTEX-145MH-0011-R10b-SM-5PNUK 60.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 60.0
GTEX-12WSF-0011-R10a-SM-5LZVH 59.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 59.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 59.0
GTEX-13QJC-0011-R10a-SM-5SI63 58.8
GTEX-12WSM-0011-R10a-SM-5DUWV 57.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 57.6
GTEX-145LU-0011-R10a-SM-5PNWJ 57.5
GTEX-13JVG-0011-R10b-SM-5KM2P 57.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 57.1
GTEX-12WSE-0011-R10b-SM-5P9JV 57.0
GTEX-TSE9-0011-R10A-SM-3DB7O 56.9
GTEX-ZUA1-0011-R10a-SM-51MT6 56.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 56.2
GTEX-N7MS-0011-R10A-SM-2HMJK 56.0
GTEX-139TS-0011-R10a-SM-5K7TU 55.8
GTEX-ZF28-0011-R10a-SM-4WWEH 55.7
GTEX-14BIN-0011-R10a-SM-5S2UA 55.5
GTEX-11WQC-0011-R10a-SM-57WCT 55.2
GTEX-13NYS-0011-R10a-SM-5MR4S 55.1
GTEX-13OW6-0011-R10a-SM-5L3HE 55.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 54.9
GTEX-13X6J-0011-R10b-SM-5PNWA 54.8
GTEX-147GR-0011-R10b-SM-5S2UM 54.8
GTEX-X261-0011-R10B-SM-4E3JT 54.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 54.6
GTEX-NL4W-0011-R10A-SM-2I3DY 54.5
GTEX-13NYB-0011-R10a-SM-5KM43 54.3
GTEX-1313W-0011-R10b-SM-5DUXA 54.2
GTEX-13QIC-0011-R10a-SM-5O9C7 54.2
GTEX-13FXS-0011-R10a-SM-5J2MA 53.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 53.7
GTEX-12WSH-0011-R10a-SM-5LZUS 53.2
GTEX-YJ89-0011-R10a-SM-4SOK9 53.2
GTEX-145LS-0011-R10a-SM-5PNUQ 52.9
GTEX-OXRO-0011-R10A-SM-2I5EH 52.6
GTEX-OXRN-0011-R10A-SM-2I5GC 52.2
GTEX-13CZV-0011-R10b-SM-5LZYD 50.9
GTEX-12WSC-0011-R10a-SM-5GU57 50.5
GTEX-12WSA-0011-R10b-SM-5P9ET 50.4
GTEX-13G51-0011-R10b-SM-5LZYF 50.1
GTEX-147F4-0011-R10b-SM-5S2WC 49.6
GTEX-13N1W-0011-R10b-SM-5MR4H 48.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 45.8
GTEX-Z93S-0011-R10a-SM-4RGNM 45.6
GTEX-ZVT3-0011-R10b-SM-57WB6 45.5
GTEX-13O3O-0011-R10a-SM-5LUA9 45.0
GTEX-14753-0011-R10b-SM-5S2WE 43.7
GTEX-13IVO-0011-R10a-SM-5LZY3 43.6
GTEX-13SLX-0011-R10a-SM-5P9HV 43.1
GTEX-RVPU-0011-R10A-SM-2XCAH 43.1
GTEX-1477Z-0011-R10b-SM-5S2RF 42.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 42.2
GTEX-ZV68-0011-R10a-SM-51MT7 40.7
GTEX-13OW7-0011-R10a-SM-5L3H3 40.5
GTEX-ZXG5-0011-R10a-SM-57WDD 36.3
GTEX-131XW-0011-R10a-SM-5DUVA 35.1
GTEX-13NZA-0011-R10b-SM-5KM54 31.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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