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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:55.3RPKM
FANTOM5:405.2Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA009433

 

Antibody HPA009696

 

Antibody CAB004738

 

Glial cells

High   Medium   High  

Neuronal cells

High   Low   High  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

55.3

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 55.3
Samples: 94

Max RPKM: 135.9
Min RPKM: 16.7
Std RPKM: 20.7
Median RPKM: 55.5
GTEX-QVUS-0011-R1A-SM-3GAD2 135.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 107.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 104.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 100.4
GTEX-QDT8-0011-R1A-SM-32PKS 91.7
GTEX-13JUV-0011-R1a-SM-5LZY4 89.6
GTEX-13G51-0011-R1a-SM-5LZYR 87.0
GTEX-13OW5-0011-R1b-SM-5L3GE 86.6
GTEX-QMR6-0011-R1A-SM-32PKW 80.5
GTEX-NPJ8-0011-R1a-SM-33HCB 80.3
GTEX-QVJO-0011-R1A-SM-2S1QI 78.1
GTEX-UTHO-0011-R1A-SM-3GIJO 77.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 76.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 71.3
GTEX-T6MN-0011-R1A-SM-32QOY 71.0
GTEX-131XH-0011-R1a-SM-5DUWA 69.7
GTEX-WZTO-0011-R1B-SM-3NMAR 69.7
GTEX-PVOW-0011-R1A-SM-32PL6 69.4
GTEX-13FHO-0011-R1b-SM-5KLZG 68.9
GTEX-145LS-0011-R1b-SM-5PNUP 68.2
GTEX-XMD1-0011-R1A-SM-4AT4C 67.4
GTEX-13N1W-0011-R1b-SM-5MR4T 66.8
GTEX-WWYW-0011-R1A-SM-3TW8G 66.6
GTEX-PWO3-0011-R1A-SM-2I5EW 66.6
GTEX-P44H-0011-R1A-SM-3NM8J 66.2
GTEX-ZUA1-0011-R1a-SM-4YCE2 64.9
GTEX-13NYS-0011-R1b-SM-5MR55 63.8
GTEX-X585-0011-R1B-SM-46MVE 63.7
GTEX-12WSH-0011-R1a-SM-5GU5V 63.2
GTEX-11GSO-0011-R1b-SM-57WD3 61.6
GTEX-1313W-0011-R1b-SM-5EQ4A 61.6
GTEX-XOTO-0011-R1B-SM-4B65C 61.5
GTEX-13N2G-0011-R1b-SM-5MR3G 61.3
GTEX-N7MT-0011-R1a-SM-5SI7S 61.3
GTEX-13OVL-0011-R1a-SM-5L3H5 61.3
GTEX-13QJC-0011-R1b-SM-5S2UU 59.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 59.5
GTEX-13S7M-0011-R1b-SM-5PNZE 58.7
GTEX-N7MS-0011-R1a-SM-2HMJG 58.0
GTEX-R55E-0011-R1A-SM-2TC6N 57.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 56.8
GTEX-X4XX-0011-R1B-SM-3P622 56.4
GTEX-12WSF-0011-R1a-SM-5DUVI 56.3
GTEX-11ZTS-0011-R1a-SM-5BC71 55.9
GTEX-13O3O-0011-R1b-SM-5KM2K 55.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 55.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 55.6
GTEX-13JVG-0011-R1a-SM-5KM32 55.4
GTEX-11UD1-0011-R1b-SM-5BC7D 54.9
GTEX-1212Z-0011-R1b-SM-5BC72 54.7
GTEX-13X6I-0011-R1b-SM-5PNZC 54.3
GTEX-13OW8-0011-R1a-SM-5L3HI 54.1
GTEX-14ASI-0011-R1b-SM-5S2TY 54.1
GTEX-131YS-0011-R1a-SM-5DUXC 53.4
GTEX-T5JC-0011-R1A-SM-32PM6 53.0
GTEX-WL46-0011-R1A-SM-3LK6M 52.8
GTEX-YFC4-0011-R1a-SM-4V6EH 50.3
GTEX-RNOR-0011-R1A-SM-5SI8F 49.4
GTEX-NPJ7-0011-R1a-SM-3GACT 48.2
GTEX-13NZA-0011-R1b-SM-5LUAF 46.4
GTEX-139TT-0011-R1a-SM-5LZVD 46.4
GTEX-145MH-0011-R1b-SM-5PNWY 45.2
GTEX-S7SE-0011-R1A-SM-2XCDE 44.8
GTEX-11ONC-0011-R1a-SM-57WD4 44.2
GTEX-TSE9-0011-R1A-SM-3DB7E 44.1
GTEX-144GL-0011-R1a-SM-5PNZ5 43.5
GTEX-12WSD-0011-R1b-SM-5LZVY 43.2
GTEX-13SLW-0011-R1a-SM-5S2W7 43.1
GTEX-13FLW-0011-R1b-SM-5LZX2 41.8
GTEX-132Q8-0011-R1a-SM-5EGLK 41.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40.8
GTEX-13FXS-0011-R1a-SM-5K7U6 40.7
GTEX-13OW7-0011-R1b-SM-5L3HF 39.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 39.2
GTEX-12WSM-0011-R1a-SM-5LZW6 39.1
GTEX-1399T-0011-R1b-SM-5DUWN 36.8
GTEX-12WSE-0011-R1b-SM-5GU4V 36.6
GTEX-WVLH-0011-R1A-SM-4MVOK 36.5
GTEX-145LU-0011-R1a-SM-5Q5CE 34.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 33.7
GTEX-YJ89-0011-R1a-SM-4RGLS 33.5
GTEX-13112-0011-R1b-SM-5HL7K 33.3
GTEX-12WSB-0011-R1b-SM-5P9EY 33.3
GTEX-13PDP-0011-R1a-SM-5PNX5 33.0
GTEX-NL3H-0011-R1a-SM-48TDJ 30.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 30.2
GTEX-13CF2-0011-R1a-SM-5LZY1 27.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 25.1
GTEX-139T8-0011-R1a-SM-5HL75 24.4
GTEX-144GO-0011-R1a-SM-5PNWO 24.0
GTEX-ZF28-0011-R1a-SM-4WWD1 22.5
GTEX-13FHP-0011-R1b-SM-5K7XL 20.5
GTEX-ZE7O-0011-R1a-SM-57WDM 17.2
GTEX-13FTY-0011-R1a-SM-5LZXE 16.7
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

405.2

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 405.2
FF:10153-102I9 76 years, female 518.4
FF:10169-103B7 60 years, female 373.7
FF:10374-105G5 89 years, female 323.6

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by the Knut & Alice Wallenberg foundation.