Tissue expression of CPSF3L - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	25.8	TPM
GTEx:	19.6	RPKM
FANTOM5:	48.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Medium
Fibroblasts:	Low
Peripheral nerve:	Not available

Antibody staining	Antibody HPA028379	Antibody HPA029025
Adipocytes	Medium	Low
Chondrocytes	Medium	Medium
Fibroblasts	Medium	Low
Peripheral nerve	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Medium
Fibroblasts:	Low
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA028379	Antibody HPA029025
Adipocytes	Medium	Low
Chondrocytes	Medium	Medium
Fibroblasts	Medium	Low
Peripheral nerve	Low	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	25.8

Female, age 80

Sample 1
TPM: 26.6

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 21.9

Female, age 57

Sample 3
TPM: 24.0

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 32.1

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 24.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	19.6

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 19.5

Samples: 350

Max RPKM: 40
Min RPKM: 8.9
Std RPKM: 3.7
Median RPKM: 19.4

GTEX-UTHO-0426-SM-5SI7N

40.0

GTEX-X638-0226-SM-47JZ9

31.5

GTEX-XQ8I-0526-SM-4BOPS

30.2

GTEX-13111-1726-SM-5EGJZ

29.2

GTEX-WVJS-0226-SM-4MVOU

29.2

GTEX-NFK9-0326-SM-3MJGV

29.0

GTEX-11EQ8-0226-SM-5EQ5G

28.8

GTEX-NPJ8-0226-SM-48TBN

28.5

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 19.6

Samples: 227

Max RPKM: 34
Min RPKM: 9.1
Std RPKM: 4.9
Median RPKM: 19

GTEX-WWTW-1326-SM-4MVNT

34.0

GTEX-13S7M-0826-SM-5QGQX

32.1

GTEX-14DAQ-2526-SM-5RQIO

30.9

GTEX-13OW7-1126-SM-5K7V6

30.8

GTEX-139D8-1626-SM-5IJFZ

30.1

GTEX-YJ89-1926-SM-5IFJ6

29.8

GTEX-ZAJG-1626-SM-5HL7I

29.7

GTEX-X585-2526-SM-4QAS1

29.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	48.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 48.3

FF:10010-101C1

65,65,76 years, mixed

48.3