Tissue expression of RNF6 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	21.2	TPM
GTEx:	7.5	RPKM
FANTOM5:	26.0	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Low

Antibody staining	Antibody HPA039343	Antibody HPA040048
Adipocytes	High	Not detected
Fibroblasts	High	Not detected
Peripheral nerve	Medium	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA039343	Antibody HPA040048
Adipocytes	Not detected	Not detected
Fibroblasts	Medium	Not detected
Peripheral nerve	Medium	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	21.2

Female, age 80

Sample 1
TPM: 18.7

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 18.4

Female, age 57

Sample 3
TPM: 18.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 24.0

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 26.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.5

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 7.4

Samples: 350

Max RPKM: 11.2
Min RPKM: 4.2
Std RPKM: 1.2
Median RPKM: 7.3

GTEX-12WSA-0326-SM-5BC6I

11.2

GTEX-WEY5-1926-SM-3GIL8

11.0

GTEX-REY6-0326-SM-2TF5A

10.9

GTEX-Y3IK-2526-SM-4WWDM

10.8

GTEX-13O1R-0226-SM-5K7U5

10.7

GTEX-ZDTT-2626-SM-5S2OP

10.5

GTEX-11TUW-2626-SM-5EQKZ

10.4

GTEX-QESD-1526-SM-2S1QT

10.4

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 7.6

Samples: 227

Max RPKM: 12.4
Min RPKM: 3.6
Std RPKM: 1.5
Median RPKM: 7.4

GTEX-11WQK-1526-SM-5EGKN

12.4

GTEX-ZTSS-1026-SM-5985N

11.8

GTEX-ZLV1-0926-SM-5S2MR

11.5

GTEX-ZTX8-0726-SM-59HL9

11.5

GTEX-13IVO-2426-SM-5K7V9

11.4

GTEX-13S86-0926-SM-5SI6I

11.4

GTEX-ZF29-0826-SM-5S2NP

11.4

GTEX-ZEX8-1226-SM-5S2OK

11.3

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	26.0

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 26.0

FF:10010-101C1

65,65,76 years, mixed

26.0