Tissue expression of RNF6 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	20.4	TPM
GTEx:	8.1	RPKM
FANTOM5:	25.6	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA039343	Antibody HPA040048
Squamous epithelial cells	Medium	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	20.4

Female, age 70

Sample 1
TPM: 17.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 21.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 22.3

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	8.1

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 8.1

Samples: 286

Max RPKM: 12.5
Min RPKM: 3.8
Std RPKM: 1.6
Median RPKM: 8

GTEX-13O1R-1326-SM-5IJF5

12.5

GTEX-ZY6K-0626-SM-59HJL

12.4

GTEX-133LE-0626-SM-5IFFJ

12.1

GTEX-RU72-0726-SM-46MUW

12.0

GTEX-13S86-0826-SM-5SI6J

11.9

GTEX-VJYA-0726-SM-4KL1T

11.8

GTEX-131XF-0826-SM-5GICG

11.6

GTEX-131XG-1026-SM-5GCMX

11.6

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	25.6

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 25.6

FF:10015-101C6

68,74,75 years, mixed

25.6