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Gene name

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In atlas

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Method

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Expression

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Specificity

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Detectable

Cell line

Detectable

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Score

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RNF6
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:60.8TPM
GTEx:14.6RPKM
FANTOM5:34.6Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Not detected
Leydig cells:Low
 

Antibody staining

Antibody HPA039343

 

Antibody HPA040048

 

Cells in seminiferous ducts

High   Not detected  

Leydig cells

Medium   Low  
   
   
   

TESTIS - HPA RNA-seq

Average TPM

60.8

overview Male, age 56
Sample 1
TPM: 48.2
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 57.3
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 67.3
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 37.7
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 64.4
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 62.8
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 49.8
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 92.0
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 58.7
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 69.4
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

14.6

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 14.6
Samples: 172

Max RPKM: 24.3
Min RPKM: 7.8
Std RPKM: 3
Median RPKM: 14.5
GTEX-ZPU1-2126-SM-57WED 24.3
GTEX-ZV7C-2026-SM-5NQ8F 21.9
GTEX-ZQUD-2026-SM-51MSM 21.6
GTEX-ZDYS-1326-SM-5IJFF 20.8
GTEX-132QS-1226-SM-5P9GD 20.7
GTEX-ZTSS-1526-SM-51MTC 20.6
GTEX-145MO-0126-SM-5S2QU 20.5
GTEX-11EQ9-1926-SM-5PNVV 20.4
GTEX-111VG-1926-SM-5GIDO 20.2
GTEX-REY6-0126-SM-48FDT 19.5
GTEX-WK11-0326-SM-4OOS6 19.3
GTEX-ZYT6-2726-SM-5GICP 19.3
GTEX-111YS-2026-SM-5EGGL 19.2
GTEX-ZZ64-1126-SM-5GZXY 19.2
GTEX-OXRL-2126-SM-3NM98 18.8
GTEX-144GL-0726-SM-5LU4P 18.7
GTEX-11GS4-2026-SM-5N9CP 18.4
GTEX-139TS-1726-SM-5IJG5 18.3
GTEX-ZT9W-2226-SM-57WFU 18.3
GTEX-13OVL-0426-SM-5IFG6 18.2
GTEX-XBEC-0126-SM-4GIDT 18.1
GTEX-YFCO-1726-SM-4W21S 18.1
GTEX-14ABY-0626-SM-5Q5C9 18.0
GTEX-ZUA1-2726-SM-59HLJ 17.9
GTEX-144GM-0426-SM-5Q5C8 17.8
GTEX-XGQ4-2026-SM-4AT6G 17.7
GTEX-13N1W-2626-SM-5IJEP 17.5
GTEX-WHSB-2126-SM-4M1XF 17.5
GTEX-ZVZP-2226-SM-57WBF 17.5
GTEX-11DXZ-2126-SM-59881 17.4
GTEX-1212Z-0326-SM-5FQSJ 17.4
GTEX-139TT-2226-SM-5LZWO 17.4
GTEX-XBED-2026-SM-4AT5D 17.4
GTEX-117YW-1526-SM-5EGGP 17.3
GTEX-Q2AI-1226-SM-48U14 17.3
GTEX-TKQ2-1526-SM-4DXUN 17.2
GTEX-111CU-1726-SM-5EGHM 17.1
GTEX-U4B1-1526-SM-4DXSL 16.9
GTEX-12ZZY-0126-SM-5LZV2 16.8
GTEX-13O61-2026-SM-5J2M6 16.8
GTEX-13VXU-0726-SM-5J2O7 16.8
GTEX-11ZUS-2726-SM-5FQUA 16.7
GTEX-145LT-0426-SM-5LUAP 16.7
GTEX-11TT1-2226-SM-5GU6B 16.6
GTEX-11P82-1526-SM-5BC5M 16.5
GTEX-S7PM-0626-SM-4AD4Q 16.4
GTEX-11LCK-2326-SM-5HL53 16.3
GTEX-13NZB-2026-SM-5MR4M 16.3
GTEX-R55C-1426-SM-48FED 16.2
GTEX-ZAB5-2426-SM-5CVMW 16.2
GTEX-13FHP-2826-SM-5IJFW 16.0
GTEX-ZTX8-1126-SM-51MRM 16.0
GTEX-13112-0226-SM-5P9IV 15.9
GTEX-RM2N-1326-SM-48FCW 15.9
GTEX-TKQ1-0926-SM-4DXU2 15.9
GTEX-11WQC-2326-SM-5EQKE 15.8
GTEX-12WSL-2326-SM-5DUXQ 15.8
GTEX-OOBK-2126-SM-3LK5T 15.8
GTEX-YEC4-1526-SM-4W1YU 15.8
GTEX-ZA64-1626-SM-5CVME 15.8
GTEX-11NV4-1726-SM-5N9FC 15.7
GTEX-12WSH-0326-SM-5GCNH 15.7
GTEX-OIZH-2126-SM-3NB1P 15.7
GTEX-R55E-0726-SM-48FCZ 15.7
GTEX-QLQ7-1426-SM-4R1JX 15.6
GTEX-ZVTK-0126-SM-57WDG 15.6
GTEX-111FC-1926-SM-5GZYC 15.5
GTEX-117XS-2026-SM-5GID1 15.5
GTEX-145MH-2326-SM-5O9AW 15.5
GTEX-YB5E-1926-SM-5IFIG 15.4
GTEX-147JS-0126-SM-5S2TW 15.3
GTEX-WFG8-1926-SM-4LVM1 15.3
GTEX-Y111-2426-SM-4TT23 15.3
GTEX-SNMC-1026-SM-4DM7K 15.2
GTEX-11TUW-2226-SM-5EQL9 15.1
GTEX-SNOS-1126-SM-4DM67 15.1
GTEX-U3ZM-1626-SM-4DXSK 15.1
GTEX-11NSD-1026-SM-5N9BE 15.0
GTEX-13111-1526-SM-5EGJX 15.0
GTEX-V1D1-2126-SM-4JBH4 15.0
GTEX-1399R-1626-SM-5P9GG 14.8
GTEX-S33H-0126-SM-4AD62 14.8
GTEX-S3XE-1526-SM-4AD5A 14.7
GTEX-S7SE-0326-SM-4AT5Q 14.7
GTEX-11NUK-2626-SM-5A5MB 14.6
GTEX-QV31-1126-SM-4R1K4 14.5
GTEX-T8EM-0126-SM-4DM5R 14.5
GTEX-13O21-1226-SM-5J2MK 14.4
GTEX-QLQW-1026-SM-447A9 14.4
GTEX-Y5V6-1726-SM-4VDSZ 14.4
GTEX-12C56-1426-SM-5FQSW 14.3
GTEX-131XE-0426-SM-5IJF4 14.3
GTEX-X3Y1-2626-SM-4PQZI 14.1
GTEX-XMK1-2026-SM-4B65K 14.1
GTEX-11P7K-1026-SM-5HL6Y 14.0
GTEX-12WSI-2126-SM-5GCMV 14.0
GTEX-YEC3-1726-SM-5IFIK 14.0
GTEX-ZYFC-0126-SM-5GIEH 14.0
GTEX-11EQ8-1426-SM-5EGJR 13.8
GTEX-U3ZH-1526-SM-4DXV1 13.8
GTEX-139T6-1226-SM-5IFFC 13.7
GTEX-S4Q7-1226-SM-4AD5I 13.7
GTEX-VJYA-1426-SM-4KL1Y 13.7
GTEX-X5EB-2026-SM-4E3KA 13.6
GTEX-Z93S-1726-SM-5HL8G 13.6
GTEX-O5YT-2126-SM-3MJGD 13.5
GTEX-Q2AH-1526-SM-48TZG 13.5
GTEX-11OF3-1826-SM-5987N 13.4
GTEX-T6MN-2026-SM-4DM7L 13.4
GTEX-13FLW-2126-SM-5N9FD 13.3
GTEX-N7MS-0126-SM-3TW8O 13.3
GTEX-WH7G-1926-SM-4LVMM 13.3
GTEX-Y9LG-1726-SM-4VBQE 13.3
GTEX-11EI6-2226-SM-5EGJM 13.2
GTEX-12WSM-1326-SM-5GCP9 13.2
GTEX-13OW5-2526-SM-5L3I1 13.2
GTEX-WZTO-0326-SM-4PQYZ 13.1
GTEX-X261-2326-SM-4PQYU 13.1
GTEX-YF7O-2026-SM-4W1YE 13.1
GTEX-12696-0226-SM-5EGL3 13.0
GTEX-QEG4-0126-SM-48TZE 12.9
GTEX-RN64-2326-SM-48FDW 12.9
GTEX-RUSQ-2126-SM-47JXK 12.9
GTEX-13FTW-1326-SM-5LZZD 12.7
GTEX-13N2G-0126-SM-5N9DV 12.7
GTEX-XAJ8-1326-SM-47JYT 12.7
GTEX-OHPM-2126-SM-3LK75 12.6
GTEX-OOBJ-2126-SM-3NB1N 12.5
GTEX-R55D-0126-SM-48FEL 12.5
GTEX-ZDTT-2026-SM-5K7TY 12.5
GTEX-1339X-1926-SM-5PNVP 12.2
GTEX-XPT6-1626-SM-4B655 12.1
GTEX-Y8E4-2226-SM-5LU94 12.1
GTEX-11O72-0726-SM-5P9GO 12.0
GTEX-13NZA-2526-SM-5IJFX 12.0
GTEX-WFON-2026-SM-4LVMW 12.0
GTEX-XQ3S-2726-SM-4BOP2 12.0
GTEX-RWSA-2426-SM-47JXR 11.9
GTEX-U8XE-0126-SM-4E3I3 11.9
GTEX-13NYB-2226-SM-5MR58 11.8
GTEX-P4QS-2126-SM-3NMCF 11.8
GTEX-11WQK-2826-SM-5EQKH 11.7
GTEX-13OW6-0126-SM-5IJGM 11.7
GTEX-14753-0626-SM-5Q5CY 11.7
GTEX-YJ89-0626-SM-4TT3Z 11.7
GTEX-QMRM-1526-SM-4R1K6 11.6
GTEX-OIZI-0126-SM-3NB13 11.5
GTEX-WVLH-2626-SM-4MVNV 11.5
GTEX-QV44-1726-SM-4R1KG 11.4
GTEX-144GN-1626-SM-5Q5BU 11.3
GTEX-WOFM-1126-SM-4OOSB 11.3
GTEX-V955-1926-SM-4KL1L 11.2
GTEX-SUCS-1326-SM-4DM5T 11.1
GTEX-UPJH-0126-SM-4IHLL 11.1
GTEX-PW2O-1426-SM-48TCD 11.0
GTEX-S95S-1126-SM-4B64E 10.6
GTEX-QEG5-0126-SM-4R1JR 10.3
GTEX-ZT9X-1426-SM-5DUX1 10.3
GTEX-XPVG-2226-SM-4B65U 10.2
GTEX-11ONC-2226-SM-5HL6D 10.1
GTEX-1399Q-2826-SM-5IJEZ 10.1
GTEX-PLZ5-1526-SM-3P5ZX 10.1
GTEX-14A6H-2326-SM-5Q5B5 10.0
GTEX-XLM4-1526-SM-4AT6D 9.8
GTEX-P4QR-0226-SM-3NMCH 9.7
GTEX-13O1R-0726-SM-5IJEI 9.3
GTEX-NFK9-0126-SM-3LK5H 9.1
GTEX-U8T8-1126-SM-4DXUE 9.1
GTEX-13OVH-0726-SM-5N9BU 8.3
GTEX-ZAB4-0126-SM-5CVMG 8.3
GTEX-147F4-0626-SM-5LUAK 8.0
GTEX-T5JC-0726-SM-4DM55 7.8
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

34.6

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 34.6
FF:10026-101D8 34,53,86 years, male 38.2
FF:10096-102C6 14-64 years, male 31.1

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