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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:22.9RPKM
FANTOM5:153.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA058412

 

Antibody CAB004415

 

Glial cells

Not detected   Not detected  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

22.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 22.9
Samples: 117

Max RPKM: 65.7
Min RPKM: 1.6
Std RPKM: 14.3
Median RPKM: 20.9
GTEX-T2IS-0011-R5A-SM-32QP4 65.7
GTEX-PVOW-0011-R5A-SM-32PL7 53.9
GTEX-WZTO-0011-R5B-SM-3NMC5 51.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50.4
GTEX-14ABY-0011-R5b-SM-5SI7B 46.4
GTEX-139TT-0011-R5b-SM-5K7W8 45.8
GTEX-WVLH-0011-R5A-SM-3MJFW 45.8
GTEX-131YS-0011-R5b-SM-5K7YB 44.7
GTEX-145MH-0011-R5a-SM-5P9JT 44.7
GTEX-12WSC-0011-R5b-SM-5CVNS 44.5
GTEX-WL46-0011-R5A-SM-3LK6V 43.3
GTEX-UTHO-0011-R5A-SM-3GIJD 42.6
GTEX-1399T-0011-R5b-SM-5IJDK 41.8
GTEX-11NV4-0011-R5a-SM-5NQ88 41.7
GTEX-1313W-0011-R5b-SM-5L3EP 41.6
GTEX-X585-0011-R5A-SM-46MVI 41.6
GTEX-Z93S-0011-R5b-SM-4RGNI 41.6
GTEX-13G51-0011-R5a-SM-5L3EB 41.4
GTEX-13VXU-0011-R5a-SM-5O9D7 39.1
GTEX-S7SE-0011-R5A-SM-2XCDA 37.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 37.5
GTEX-QVJO-0011-R5A-SM-2S1QM 37.2
GTEX-14BIM-0011-R5b-SM-5S2RM 36.9
GTEX-N7MS-0011-R5a-SM-2HMK8 36.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 35.6
GTEX-13OW6-0011-R5a-SM-5O9BK 35.4
GTEX-13FLW-0011-R5a-SM-5LZX6 34.3
GTEX-TSE9-0011-R5A-SM-3DB7J 34.0
GTEX-13FXS-0011-R5b-SM-5LZYE 33.9
GTEX-P44H-0011-R5A-SM-2XCEX 33.3
GTEX-13SLX-0011-R5a-SM-5O9BV 33.1
GTEX-T5JC-0011-R5A-SM-32PLK 33.0
GTEX-WWYW-0011-R5A-SM-3NB3E 32.9
GTEX-145LS-0011-R5a-SM-5SI65 32.6
GTEX-13OVL-0011-R5b-SM-5L3FU 32.1
GTEX-T6MN-0011-R5A-SM-32QPD 31.1
GTEX-11OF3-0011-R5a-SM-57WB4 30.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 30.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 30.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 29.5
GTEX-ZUA1-0011-R5b-SM-51MTG 28.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 28.5
GTEX-13O3O-0011-R5b-SM-5KM44 27.6
GTEX-N7MT-0011-R5a-SM-2I3G6 27.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 27.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 27.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 26.7
GTEX-R55E-0011-R5A-SM-2TC5N 26.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 26.1
GTEX-11H98-0011-R5b-SM-57WCF 25.9
GTEX-12WSF-0011-R5a-SM-5HL8K 25.4
GTEX-11GSP-0011-R5a-SM-57WBE 24.8
GTEX-12ZZX-0011-R5a-SM-5HL89 24.8
GTEX-132Q8-0011-R5a-SM-5IJDM 23.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 22.9
GTEX-13NYB-0011-R5a-SM-5MR45 22.5
GTEX-13X6K-0011-R5b-SM-5PNUE 22.3
GTEX-13X6I-0011-R5a-SM-5PNWW 21.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 20.9
GTEX-13OW7-0011-R5b-SM-5O9DM 20.4
GTEX-QMR6-0011-R5A-SM-32PKT 20.4
GTEX-NL3H-0011-R5a-SM-2I3GB 20.3
GTEX-13S7M-0011-R5b-SM-5P9HS 20.1
GTEX-12WSD-0011-R5b-SM-5CVNG 19.8
GTEX-YFC4-0011-R5a-SM-4RGLR 19.4
GTEX-13JUV-0011-R5a-SM-5LZY5 19.0
GTEX-13NYS-0011-R5a-SM-5MR4D 18.9
GTEX-RVPU-0011-R5A-SM-2XCAD 18.7
GTEX-13FLV-0011-R5a-SM-5LZWT 18.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 18.4
GTEX-13CZV-0011-R5a-SM-5K7XA 18.1
GTEX-RU72-0011-R5A-SM-2TF6U 17.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 17.5
GTEX-RVPV-0011-R5A-SM-2TF69 16.5
GTEX-13OW5-0011-R5b-SM-5L3FR 16.3
GTEX-12WSB-0011-R5b-SM-5GU67 16.0
GTEX-13OVH-0011-R5b-SM-5KM4L 15.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 15.1
GTEX-14BIN-0011-R5b-SM-5SI78 14.5
GTEX-NL4W-0011-R5a-SM-2I3GD 14.5
GTEX-ZXG5-0011-R5b-SM-57WBN 13.3
GTEX-ZE7O-0011-R5a-SM-57WBO 12.2
GTEX-OHPN-0011-R5A-SM-2I5FF 11.9
GTEX-XOTO-0011-R5A-SM-4B657 11.1
GTEX-XMD1-0011-R5A-SM-4AT47 10.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 9.9
GTEX-OXRN-0011-R5A-SM-2I5EF 9.2
GTEX-YJ89-0011-R5a-SM-4V6GM 9.2
GTEX-12WSH-0011-R5b-SM-5P9F3 9.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 9.1
GTEX-X261-0011-R5A-SM-3NMB4 8.7
GTEX-11WQC-0011-R5a-SM-5BC74 8.3
GTEX-12WSA-0011-R5b-SM-5GU5I 8.3
GTEX-X4XX-0011-R5A-SM-46MWN 7.6
GTEX-139TS-0011-R5b-SM-5J2MZ 7.5
GTEX-13112-0011-R5b-SM-5DUV8 7.4
GTEX-13CIG-0011-R5b-SM-5L3F2 7.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 6.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 6.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 6.5
GTEX-NPJ7-0011-R5a-SM-33HBK 6.4
GTEX-13JVG-0011-R5a-SM-5MR4O 6.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 6.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 5.7
GTEX-ZVT3-0011-R5a-SM-51MSI 5.6
GTEX-144GL-0011-R5b-SM-5PNUJ 5.4
GTEX-144GO-0011-R5a-SM-5PNUR 5.2
GTEX-13FHP-0011-R5b-SM-5LZY2 3.9
GTEX-ZV68-0011-R5a-SM-4YCDW 3.5
GTEX-13CF2-0011-R5a-SM-5LZWS 2.6
GTEX-1445S-0011-R5a-SM-5PNUS 2.6
GTEX-13NZA-0011-R5b-SM-5KM4K 2.5
GTEX-1477Z-0011-R5b-SM-5PNUO 2.4
GTEX-S7PM-0011-R5A-SM-3NM8G 2.4
GTEX-139T8-0011-R5b-SM-5J1MO 2.2
GTEX-145MG-0011-R5b-SM-5S2VU 1.7
GTEX-11UD1-0011-R5b-SM-5P9FP 1.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

153.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 153.7
FF:10379-105H1 89 years, female 180.3
FF:10164-103B2 76 years, female 127.1

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