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GAD1
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:75.5TPM
GTEx:22.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA058412

 

Antibody CAB004415

 

Endothelial cells

Not detected   Not detected  

Glial cells

Low   Not detected  

Neuronal cells

Medium   Medium  

Neuropil

Medium   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

75.5

N/A Male, age 5
Sample 1
TPM: 44.3
overview Female, age 40
Sample 2
TPM: 72.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 110.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

22.3

GTEx sample id

RPKM

12.318.124.22.041.60510152025303540
 
12.318.124.22.041.60510152025303540

Brain - Cortex

Brain - Cortex
RPKM: 18.6
Samples: 114

Max RPKM: 41.6
Min RPKM: 2
Std RPKM: 8.2
Median RPKM: 18.1
GTEX-T2IS-3026-SM-32QPM 41.6
GTEX-PVOW-2526-SM-2XCF7 40.7
GTEX-ZUA1-3026-SM-59HJC 35.7
GTEX-RNOR-2326-SM-2TF4I 33.4
GTEX-131YS-3126-SM-5KLYT 32.5
GTEX-TSE9-3026-SM-3DB76 32.0
GTEX-Y111-2726-SM-4TT3N 32.0
GTEX-11NUK-2926-SM-5A5MD 31.7
GTEX-WZTO-2926-SM-3NM9I 30.2
GTEX-145MH-3026-SM-5Q5DZ 29.4
GTEX-13NYC-2826-SM-5K7WR 29.1
GTEX-144GL-3026-SM-5Q5CW 29.0
GTEX-13X6J-3026-SM-5Q5CU 28.8
GTEX-12126-1026-SM-5P9JJ 28.6
GTEX-WVLH-3026-SM-3MJG9 28.3
GTEX-13FXS-3126-SM-5J2NN 27.3
GTEX-11DXY-3226-SM-5GIDE 26.7
GTEX-13X6K-2926-SM-5Q5D5 26.6
GTEX-12ZZZ-3026-SM-5BC67 26.4
GTEX-13JUV-2926-SM-5LZX7 25.7
GTEX-14BMV-3026-SM-5S2PQ 25.7
GTEX-117XS-3026-SM-5N9CA 25.6
GTEX-14ASI-3026-SM-5S2PN 25.5
GTEX-ZAK1-3026-SM-5S2MJ 25.5
GTEX-WHSE-3026-SM-3P5ZH 25.2
GTEX-13O3Q-2926-SM-5KM45 25.1
GTEX-11GSO-2926-SM-5HL73 25.0
GTEX-13OVH-3026-SM-5MR4N 24.8
GTEX-ZE7O-3126-SM-5HL5X 24.3
GTEX-13VXU-2926-SM-5LU5C 24.0
GTEX-12WSC-3026-SM-5GCNF 23.7
GTEX-11PRG-2926-SM-5987A 23.6
GTEX-Y8DK-0826-SM-4TT3T 23.6
GTEX-WL46-2926-SM-3LK82 23.3
GTEX-XOTO-3026-SM-4B65M 23.3
GTEX-YFC4-3126-SM-5PNV6 23.2
GTEX-ZYFD-3026-SM-5E44C 23.2
GTEX-111FC-3126-SM-5GZZ2 23.1
GTEX-11ZUS-2926-SM-5FQSL 23.1
GTEX-145MG-3026-SM-5RQJA 22.7
GTEX-13OW6-3026-SM-5J2MI 22.1
GTEX-11OC5-0726-SM-5P9JK 21.9
GTEX-QMR6-1426-SM-32PLA 21.7
GTEX-YJ89-3026-SM-5IFJI 21.6
GTEX-QVJO-1426-SM-2S1QY 20.8
GTEX-Q2AG-2926-SM-2HMJ3 20.7
GTEX-X585-3026-SM-46MWF 20.7
GTEX-13SLX-3126-SM-5S2Q5 20.6
GTEX-T5JC-2426-SM-3NMDB 19.8
GTEX-T6MN-2626-SM-32PMQ 19.8
GTEX-1399T-3026-SM-5KLZC 19.4
GTEX-R55F-1326-SM-5S2V4 19.2
GTEX-1128S-2726-SM-5H12C 18.9
GTEX-12ZZX-2926-SM-5GCOQ 18.7
GTEX-WWYW-3126-SM-3NB39 18.7
GTEX-14A5I-2926-SM-5Q5CQ 18.4
GTEX-11O72-2926-SM-5BC4V 18.2
GTEX-12ZZY-3026-SM-5GCOU 18.0
GTEX-11EMC-3226-SM-5EGKW 17.9
GTEX-147GR-3026-SM-5S2ML 17.9
GTEX-12WSH-3026-SM-5CVNI 17.8
GTEX-13FHO-3026-SM-5J1O9 17.4
GTEX-1313W-3126-SM-5LZUI 17.3
GTEX-11DXW-1126-SM-5H12Q 17.2
GTEX-X4XX-3026-SM-3NMB2 17.2
GTEX-13S7M-3126-SM-5RQJQ 17.1
GTEX-UTHO-3026-SM-3GAFB 17.0
GTEX-145MF-2726-SM-5O995 16.7
GTEX-13FLW-1426-SM-5K7YE 16.5
GTEX-12WSD-3126-SM-5HL7P 16.4
GTEX-13FHP-3026-SM-5IJBS 16.4
GTEX-Z93S-2926-SM-57WB9 16.4
GTEX-11OF3-2926-SM-5HL78 15.9
GTEX-XLM4-3026-SM-4AT6L 15.9
GTEX-11EI6-3026-SM-5GZZO 14.7
GTEX-13NYB-3026-SM-5IJD7 14.7
GTEX-13QIC-2926-SM-5J2NF 14.6
GTEX-11WQK-3026-SM-5EQL6 14.4
GTEX-13O3O-3126-SM-5KM3H 14.0
GTEX-131XW-3126-SM-5LZUC 13.7
GTEX-OXRN-2426-SM-2I5EQ 13.6
GTEX-145LS-3126-SM-5Q5BY 13.2
GTEX-11ONC-2926-SM-5P9JM 13.0
GTEX-13OW8-2826-SM-5L3GC 13.0
GTEX-11NV4-2126-SM-5N9DS 12.3
GTEX-13PL6-3126-SM-5LUAR 12.3
GTEX-13OW7-3026-SM-5L3GY 12.0
GTEX-ZVT3-3026-SM-5E43N 11.7
GTEX-QVUS-2826-SM-3GADB 11.5
GTEX-RU72-3026-SM-5SI7Y 11.5
GTEX-139T8-1026-SM-5J2MC 10.5
GTEX-11GS4-3126-SM-5A5LH 10.0
GTEX-13NYS-3126-SM-5KLYV 10.0
GTEX-NPJ7-2726-SM-2I3FT 9.5
GTEX-132Q8-3026-SM-5PNVG 9.4
GTEX-ZAJG-3126-SM-5HL9J 9.2
GTEX-12ZZW-2926-SM-5LZUP 8.9
GTEX-13PVQ-3026-SM-5SI93 8.9
GTEX-QDT8-2926-SM-32PKC 8.9
GTEX-13OVJ-2826-SM-5L3GW 8.8
GTEX-NPJ8-1526-SM-2D7VU 8.8
GTEX-144FL-3026-SM-5O99C 8.1
GTEX-1192X-3126-SM-5N9BY 7.7
GTEX-ZZPT-3026-SM-5GZXH 7.7
GTEX-N7MT-1126-SM-5SI7V 7.4
GTEX-13JVG-3126-SM-5L3FH 6.7
GTEX-11GSP-3226-SM-5986O 5.6
GTEX-13G51-3026-SM-5IJB8 5.5
GTEX-1117F-3226-SM-5N9CT 5.3
GTEX-PWO3-0926-SM-2I5EY 5.3
GTEX-11TTK-2926-SM-5PNYP 5.0
GTEX-13IVO-2926-SM-5L3CZ 4.8
GTEX-1445S-3026-SM-5O9BR 3.2
GTEX-12WSA-2926-SM-5EQ4D 2.0
Show all
14.226.336.22.758.20510152025303540455055
 
14.226.336.22.758.20510152025303540455055

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 26.2
Samples: 108

Max RPKM: 58.2
Min RPKM: 2.7
Std RPKM: 14.2
Median RPKM: 26.3
GTEX-12126-0011-R10b-SM-5BC6T 58.2
GTEX-131YS-0011-R10b-SM-5EQ5N 57.9
GTEX-ZUA1-0011-R10a-SM-51MT6 55.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 52.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 50.4
GTEX-13X6J-0011-R10b-SM-5PNWA 49.2
GTEX-145MH-0011-R10b-SM-5PNUK 48.8
GTEX-S7SE-0011-R10A-SM-2XCDF 48.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 45.8
GTEX-WL46-0011-R10A-SM-3MJFQ 45.2
GTEX-13O3Q-0011-R10b-SM-5KM39 45.1
GTEX-12WSE-0011-R10b-SM-5P9JV 44.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 43.9
GTEX-14BIN-0011-R10a-SM-5S2UA 43.7
GTEX-12WSM-0011-R10a-SM-5DUWV 43.5
GTEX-WVLH-0011-R10A-SM-3MJFM 43.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 43.1
GTEX-13OVL-0011-R10a-SM-5L3GS 42.3
GTEX-N7MS-0011-R10A-SM-2HMJK 40.9
GTEX-YJ89-0011-R10a-SM-4SOK9 40.3
GTEX-T6MN-0011-R10A-SM-32QP7 39.0
GTEX-13FXS-0011-R10a-SM-5J2MA 38.9
GTEX-1313W-0011-R10b-SM-5DUXA 38.8
GTEX-P44H-0011-R10A-SM-2XCEK 38.2
GTEX-12WSC-0011-R10a-SM-5GU57 37.3
GTEX-X585-0011-R10A-SM-46MUY 36.7
GTEX-131XH-0011-R10a-SM-5EGLJ 36.4
GTEX-YFC4-0011-R10a-SM-4SOK5 36.1
GTEX-WZTO-0011-R10B-SM-4E3KB 35.7
GTEX-13G51-0011-R10b-SM-5LZYF 35.5
GTEX-13JUV-0011-R10b-SM-5LZXR 35.5
GTEX-147GR-0011-R10b-SM-5S2UM 35.3
GTEX-11ZUS-0011-R10b-SM-5BC79 35.2
GTEX-13SLX-0011-R10a-SM-5P9HV 35.1
GTEX-12WSF-0011-R10a-SM-5LZVH 34.9
GTEX-TSE9-0011-R10A-SM-3DB7O 34.7
GTEX-13OW8-0011-R10a-SM-5L3H6 34.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 33.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 33.0
GTEX-Z93S-0011-R10a-SM-4RGNM 32.9
GTEX-13NYB-0011-R10a-SM-5KM43 32.8
GTEX-T5JC-0011-R10A-SM-32PM2 32.5
GTEX-QMR6-0011-R10A-SM-32PKO 32.3
GTEX-QVUS-0011-R10A-SM-3GIK3 31.9
GTEX-13OW6-0011-R10a-SM-5L3HE 31.7
GTEX-145MG-0011-R10a-SM-5PNWG 30.1
GTEX-WWYW-0011-R10A-SM-3NB35 29.2
GTEX-13O3O-0011-R10a-SM-5LUA9 28.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 27.9
GTEX-13OW7-0011-R10a-SM-5L3H3 27.8
GTEX-13X6K-0011-R10a-SM-5P9JR 27.7
GTEX-13FLW-0011-R10b-SM-5LZZF 27.6
GTEX-N7MT-0011-R10A-SM-2I3E1 27.6
GTEX-13S7M-0011-R10b-SM-5PNZB 26.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 25.7
GTEX-XLM4-0011-R10A-SM-4AT5P 24.8
GTEX-11H98-0011-R10b-SM-5NQ98 24.6
GTEX-X4XX-0011-R10B-SM-46MWO 23.5
GTEX-145LS-0011-R10a-SM-5PNUQ 23.2
GTEX-NL3H-0011-R10A-SM-2I3E9 23.1
GTEX-13QIC-0011-R10a-SM-5O9C7 22.9
GTEX-X4EP-0011-R10B-SM-4QASJ 22.9
GTEX-12WSH-0011-R10a-SM-5LZUS 22.2
GTEX-13RTJ-0011-R10b-SM-5O9CW 21.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 20.4
GTEX-13CZV-0011-R10b-SM-5LZYD 19.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 19.2
GTEX-139TS-0011-R10a-SM-5K7TU 18.0
GTEX-NL4W-0011-R10A-SM-2I3DY 17.8
GTEX-147F4-0011-R10b-SM-5S2WC 17.7
GTEX-13N1W-0011-R10b-SM-5MR4H 17.6
GTEX-14BIL-0011-R10a-SM-5SI75 17.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 17.3
GTEX-145LU-0011-R10a-SM-5PNWJ 17.0
GTEX-ZVT3-0011-R10b-SM-57WB6 16.7
GTEX-13NZA-0011-R10b-SM-5KM54 16.4
GTEX-OXRO-0011-R10A-SM-2I5EH 16.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 15.9
GTEX-QDT8-0011-R10A-SM-32PKG 15.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 14.7
GTEX-11WQK-0011-R10a-SM-5BC6R 14.2
GTEX-OXRN-0011-R10A-SM-2I5GC 14.2
GTEX-13FHO-0011-R10b-SM-5J2MM 14.1
GTEX-13NYS-0011-R10a-SM-5MR4S 13.6
GTEX-RVPU-0011-R10A-SM-2XCAH 13.6
GTEX-ZF28-0011-R10a-SM-4WWEH 13.5
GTEX-11WQC-0011-R10a-SM-57WCT 13.2
GTEX-ZXG5-0011-R10a-SM-57WDD 12.3
GTEX-13X6I-0011-R10a-SM-5PNWI 11.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 11.4
GTEX-12WSD-0011-R10b-SM-5GU79 11.3
GTEX-13QJC-0011-R10a-SM-5SI63 9.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 8.4
GTEX-X261-0011-R10B-SM-4E3JT 8.3
GTEX-13N2G-0011-R10a-SM-5MR34 8.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 7.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 6.6
GTEX-14753-0011-R10b-SM-5S2WE 6.3
GTEX-13JVG-0011-R10b-SM-5KM2P 6.1
GTEX-1477Z-0011-R10b-SM-5S2RF 5.4
GTEX-13SLW-0011-R10a-SM-5S2UI 4.7
GTEX-13IVO-0011-R10a-SM-5LZY3 4.6
GTEX-131XW-0011-R10a-SM-5DUVA 4.3
GTEX-XMD1-0011-R10A-SM-4AT4A 4.0
GTEX-1445S-0011-R10a-SM-5PNWB 3.3
GTEX-ZV68-0011-R10a-SM-51MT7 2.8
GTEX-12WSA-0011-R10b-SM-5P9ET 2.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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