We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CNN1
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:84.5TPM
GTEx:38.4RPKM
FANTOM5:58.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA014263

 

Antibody CAB000007

 

Adipocytes

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Myoepithelial cells

Medium   High  
   
   

BREAST - HPA RNA-seq

Average TPM

84.5

overview Female, age 52
Sample 1
TPM: 67.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 131.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 61.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 77.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

38.4

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 38.4
Samples: 214

Max RPKM: 166.4
Min RPKM: 1
Std RPKM: 32
Median RPKM: 27.2
GTEX-YJ8O-2226-SM-5IFHW 166.4
GTEX-12WSK-2226-SM-5GCO5 159.7
GTEX-XOT4-0726-SM-4GIAW 144.4
GTEX-11P7K-0726-SM-5EGKX 121.5
GTEX-13O3O-0826-SM-5K7WE 102.1
GTEX-T2IS-1526-SM-32QPR 101.6
GTEX-11WQC-1726-SM-5GU4W 99.1
GTEX-ZVT2-1826-SM-5NQ8W 99.1
GTEX-R3RS-0626-SM-48FE1 97.2
GTEX-13CF2-2026-SM-5K7VI 95.9
GTEX-QDT8-0626-SM-48TYW 95.2
GTEX-Y111-2026-SM-4SOJA 94.3
GTEX-ZU9S-1926-SM-5NQBP 93.9
GTEX-SE5C-2126-SM-4BRUJ 92.9
GTEX-RU72-0626-SM-46MUI 90.4
GTEX-11GS4-2126-SM-5A5KR 90.0
GTEX-13PL6-2926-SM-5L3I2 89.8
GTEX-W5X1-2326-SM-3GIL6 89.8
GTEX-144GL-2026-SM-5LU3O 89.4
GTEX-11WQK-2426-SM-5GU5C 88.8
GTEX-147F4-2826-SM-5NQBN 88.1
GTEX-QVJO-1826-SM-447C9 88.1
GTEX-Y5LM-1726-SM-4VDSX 86.5
GTEX-14ABY-2126-SM-5QGQZ 84.3
GTEX-12WSM-1726-SM-5BC6J 83.7
GTEX-X4EP-2926-SM-3P5YQ 82.5
GTEX-131YS-0626-SM-5EGKL 79.9
GTEX-WXYG-2226-SM-4E3IM 79.8
GTEX-WI4N-1426-SM-3LK7H 78.0
GTEX-Y5V5-2126-SM-4WWFO 77.1
GTEX-WYBS-0926-SM-3NM94 76.1
GTEX-145MN-1926-SM-5SIAI 75.3
GTEX-11PRG-0826-SM-5EQ6A 74.8
GTEX-ZEX8-2226-SM-57WC6 72.9
GTEX-VJWN-0726-SM-3GIJ8 71.9
GTEX-TML8-1226-SM-32QON 71.2
GTEX-ZLV1-1426-SM-4WWES 71.0
GTEX-Y3I4-1526-SM-4TT7K 70.7
GTEX-11DXW-0626-SM-5N9ER 69.4
GTEX-X15G-1626-SM-3NMB3 69.2
GTEX-T5JC-2126-SM-32PMO 66.9
GTEX-Q2AG-0326-SM-48U1O 66.6
GTEX-14AS3-1626-SM-5S2OY 65.7
GTEX-13113-1726-SM-5GCOO 64.1
GTEX-ZF29-1926-SM-5S2P1 63.3
GTEX-YFC4-1426-SM-5IFJG 63.1
GTEX-ZZPU-0626-SM-5E43T 62.9
GTEX-ZAJG-0626-SM-5HL8X 62.3
GTEX-XMD2-0926-SM-4WWEF 62.0
GTEX-XYKS-1326-SM-4BRUN 61.8
GTEX-13W3W-1226-SM-5LU4H 60.6
GTEX-WRHU-0326-SM-3MJFY 60.5
GTEX-13FTY-2226-SM-5J1ND 60.1
GTEX-S4P3-1326-SM-4AD6V 59.1
GTEX-ZF3C-2326-SM-5S2MZ 58.9
GTEX-11EI6-0626-SM-5985T 57.0
GTEX-WYJK-1326-SM-3NB2T 56.9
GTEX-RWS6-1926-SM-47JXY 55.8
GTEX-13OW5-2226-SM-5L3HC 55.7
GTEX-WYVS-1726-SM-3NMAY 55.1
GTEX-ZXES-0826-SM-5E43C 54.3
GTEX-UJHI-1426-SM-3DB9C 52.9
GTEX-13W46-0826-SM-5LU3H 52.8
GTEX-1314G-1226-SM-5BC6D 52.6
GTEX-ZY6K-1626-SM-5GZWV 52.3
GTEX-12ZZX-1126-SM-5EGKB 52.2
GTEX-Y8E4-1626-SM-5S2MW 51.6
GTEX-13NZ9-1026-SM-5MR5K 51.5
GTEX-Y3IK-2326-SM-4WWDT 50.1
GTEX-ZVTK-0326-SM-51MRR 50.1
GTEX-13NZ8-0126-SM-5IJCT 49.3
GTEX-1399U-1826-SM-5PNZ1 48.5
GTEX-ZV7C-1826-SM-5NQ83 48.2
GTEX-XUZC-1626-SM-4BRVP 46.7
GTEX-11TT1-2126-SM-5GU5Y 46.4
GTEX-ZVT4-1026-SM-57WC4 46.3
GTEX-ZF2S-2026-SM-5E461 46.0
GTEX-1313W-0826-SM-5EQ4T 44.2
GTEX-VUSG-2226-SM-4KKZO 43.7
GTEX-XUJ4-1926-SM-4BOOV 43.0
GTEX-ZVZQ-0826-SM-51MRF 42.8
GTEX-XBED-1626-SM-47JYN 42.2
GTEX-11EQ9-1826-SM-5Q5AJ 41.1
GTEX-13D11-1026-SM-5IJFB 41.0
GTEX-ZTTD-1026-SM-51MRD 40.0
GTEX-1122O-1226-SM-5H113 39.8
GTEX-13NZB-2126-SM-5MR4Y 39.6
GTEX-UPK5-2326-SM-3P5Z8 38.8
GTEX-145LT-0726-SM-5S2VM 37.9
GTEX-11P81-1926-SM-5BC53 37.8
GTEX-T6MN-0726-SM-32PML 37.8
GTEX-1269C-2426-SM-5FQSN 36.8
GTEX-ZC5H-2626-SM-5J2MG 36.4
GTEX-131XW-0726-SM-5EGK3 36.2
GTEX-SIU7-1626-SM-4BRUK 35.3
GTEX-ZYWO-2326-SM-5GZY4 34.5
GTEX-R55F-1726-SM-2TF4R 34.4
GTEX-TMMY-0726-SM-33HBE 33.9
GTEX-ZWKS-2826-SM-5NQ74 33.2
GTEX-13QIC-2326-SM-5LU5N 32.7
GTEX-133LE-1726-SM-5K7VQ 30.7
GTEX-11EMC-2026-SM-5A5JV 30.6
GTEX-T5JW-2026-SM-4DM63 30.5
GTEX-139TU-0626-SM-5KM3X 28.5
GTEX-13O3Q-2226-SM-5KM4O 28.5
GTEX-13OW8-0226-SM-5K7UP 28.5
GTEX-1117F-2826-SM-5GZXL 27.9
GTEX-U3ZH-1426-SM-4DXSR 26.5
GTEX-12WSB-0626-SM-59HJO 26.4
GTEX-XUW1-2326-SM-4BOO5 25.9
GTEX-13N11-1726-SM-5J1OJ 25.6
GTEX-145MO-0826-SM-5NQBL 25.6
GTEX-WOFL-0826-SM-3MJG1 25.2
GTEX-ZPIC-1126-SM-5BC7F 25.2
GTEX-ZUA1-1526-SM-59HLS 25.2
GTEX-ZYT6-0126-SM-5E45J 25.0
GTEX-11NV4-2026-SM-5N9DG 24.5
GTEX-Y8LW-1626-SM-5IFHX 24.5
GTEX-14753-2426-SM-5LU8U 24.4
GTEX-QEL4-2126-SM-447AE 24.0
GTEX-ZTX8-1226-SM-4YCE9 23.9
GTEX-139T8-0826-SM-5L3DE 23.5
GTEX-S7SE-0826-SM-4AT4D 22.9
GTEX-ZYW4-0826-SM-5GIDG 22.9
GTEX-11DXY-2326-SM-5GICW 22.4
GTEX-U412-1826-SM-4DXTJ 22.4
GTEX-13S86-1226-SM-5S2OA 22.1
GTEX-146FH-0826-SM-5SI8T 22.1
GTEX-T6MO-0326-SM-32QOK 22.0
GTEX-YB5E-1726-SM-5IFJ3 21.5
GTEX-117YX-1426-SM-5H12H 21.1
GTEX-11LCK-2426-SM-5HL5F 21.1
GTEX-XQ8I-2426-SM-4WAXY 20.8
GTEX-QEG5-0726-SM-4R1JQ 20.6
GTEX-ZVE2-1226-SM-5NQ8R 20.5
GTEX-13O3P-0826-SM-5L3DH 20.4
GTEX-XMD1-0826-SM-4AT52 20.4
GTEX-X4XY-0926-SM-4E3JD 20.0
GTEX-S32W-2026-SM-4AD6E 19.8
GTEX-R53T-1526-SM-48FEK 19.7
GTEX-11I78-2226-SM-5PNYA 19.3
GTEX-11EM3-1326-SM-5N9C6 19.0
GTEX-S341-1526-SM-4AD6K 18.9
GTEX-12KS4-0126-SM-5Q5A5 18.1
GTEX-111YS-1926-SM-5GICC 17.9
GTEX-11OF3-1926-SM-59889 17.5
GTEX-T2YK-2226-SM-32QPT 16.7
GTEX-ZQUD-1926-SM-51MSA 16.2
GTEX-Y114-2026-SM-4TT7L 15.8
GTEX-11O72-2126-SM-5N9FO 15.3
GTEX-X261-0626-SM-3NMD9 15.3
GTEX-S4UY-0726-SM-4AD6X 15.1
GTEX-1192X-2326-SM-5987X 14.3
GTEX-11ZUS-0826-SM-5FQUY 14.2
GTEX-ZYFC-0826-SM-5E44K 14.2
GTEX-XQ3S-1326-SM-4BOPQ 14.1
GTEX-U3ZN-1926-SM-4DXSG 13.9
GTEX-14E6E-1326-SM-5S2NR 13.6
GTEX-TKQ2-1826-SM-33HB2 13.5
GTEX-ZDTT-2126-SM-5S2OJ 12.6
GTEX-ZV6S-1826-SM-5NQ8D 12.5
GTEX-R55D-0826-SM-48FEA 12.2
GTEX-ZZ64-1226-SM-5E43R 11.9
GTEX-13FHO-0826-SM-5L3E8 11.8
GTEX-S4Q7-1126-SM-4AD6R 11.8
GTEX-YEC3-1026-SM-5IFI5 11.8
GTEX-11DXZ-1926-SM-5GZZL 11.4
GTEX-13N1W-0626-SM-5MR4U 11.2
GTEX-132Q8-1426-SM-5EGK7 10.7
GTEX-13FTX-1126-SM-5N9EN 10.4
GTEX-13O61-1826-SM-5KM4I 9.8
GTEX-13FTW-1426-SM-5LZWZ 9.2
GTEX-XV7Q-2326-SM-4BRVZ 8.9
GTEX-Y9LG-1426-SM-5IFJZ 8.6
GTEX-11GSO-1926-SM-5A5K3 8.1
GTEX-139T6-1626-SM-5PNYZ 8.1
GTEX-1211K-1926-SM-5EQLB 7.9
GTEX-132NY-0826-SM-5K7Y7 7.9
GTEX-QMRM-1626-SM-4R1KV 7.6
GTEX-ZAB4-2526-SM-5HL8M 7.6
GTEX-11ONC-2126-SM-5HL6E 7.0
GTEX-13PVQ-1026-SM-5KM3M 6.9
GTEX-11NSD-0926-SM-5N9DR 6.8
GTEX-S33H-0326-SM-4AD6N 6.5
GTEX-12BJ1-1826-SM-5HL9N 6.4
GTEX-ZA64-1526-SM-5CVMD 6.3
GTEX-WY7C-2726-SM-3NB3P 6.2
GTEX-ZDXO-0126-SM-5S2ND 5.6
GTEX-11TUW-1826-SM-5BC5D 5.5
GTEX-ZLFU-2126-SM-4WWEV 5.0
GTEX-11P82-1326-SM-5HL62 4.8
GTEX-REY6-2426-SM-48FF5 4.7
GTEX-12WSN-1326-SM-5GCNT 4.5
GTEX-YFCO-1826-SM-4W1YH 4.5
GTEX-ZT9W-2026-SM-51MRA 4.5
GTEX-RUSQ-2026-SM-4GIAK 4.4
GTEX-YB5K-1626-SM-5IFIN 4.4
GTEX-11DZ1-0326-SM-5N9BN 3.7
GTEX-ZQG8-0726-SM-5P9H9 3.6
GTEX-145ME-1526-SM-5Q5F2 2.9
GTEX-117XS-1926-SM-5GICO 2.8
GTEX-UTHO-1026-SM-3GAF7 2.6
GTEX-WFON-1826-SM-3GILG 2.5
GTEX-Y5V6-2126-SM-4WWFX 2.4
GTEX-ZDYS-1126-SM-5K7UB 2.3
GTEX-144GM-0926-SM-5O994 2.1
GTEX-XGQ4-0926-SM-4AT4U 2.1
GTEX-11ZTT-2326-SM-5EQLG 2.0
GTEX-U8XE-0826-SM-4E3J1 1.7
GTEX-132AR-0826-SM-5EGK6 1.4
GTEX-PSDG-1626-SM-48TCQ 1.4
GTEX-TKQ1-0226-SM-33HB5 1.4
GTEX-XMK1-1126-SM-4IHJ8 1.1
GTEX-13CF3-2126-SM-5IFJP 1.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

58.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 58.7
FF:10080-102A8 77 years, female 58.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.