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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA026678

 

Antibody CAB004399

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA026678   sc-28325  

Host species

Rabbit   Mouse  

Clonality

pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

   

Released in version

5   2  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA026678

 

Antibody CAB004399

 
Immunocytochemistry

Approved    
Immunohistochemistry

Approved   Approved  
Western blot

Supported   Supported  
Protein array

Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA026678

 

Antibody CAB004399

 

Standard validation

Approved    

   

Figure description

Immunofluorescent staining of human cell line SiHa shows localization to microtubule ends.    

Antibody dilution

1:54    

Literature conformity

The subcellular location is partly supported by literature or no literature is available.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA026678

 

Antibody CAB004399

 

Standard validation

Approved   Approved  

   

Figure description

Immunohistochemical staining of human placenta shows strong cytoplasmic positivity in trophoblastic cells.   Immunohistochemical staining of human prostate shows strong cytoplasmic and nuclear positivity in glandular cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 69 cell types
  RNA: detected in 37 tissues
Protein: detected in 55 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:450   1:75  

Literature conformity

Partly consistent with extensive gene/protein characterization data.   Partly consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA026678

 

Antibody CAB004399

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).
 

   

Figure description

Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 229, 112, 83.5, 47.9, 32.3, 26.5, 17.2
Lane 2: U-251 MG
Lane 3: Human Plasma
Lane 4: Liver
Lane 5: Tonsil
Lane 6: RT4
 

Target mass (kDa)

162.2, 161, 156.8, 148.1, 116.3   162.2, 161, 156.8, 148.1, 116.3, 89.6, 46.2, 13.5, 11.5, 8.9  

Antibody dilution

1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA026678

 

Antibody CAB004399

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA026678

 

Antibody CAB004399

 

Antigen

Recombinant protein fragment   Recombinant protein  

Length (aa)

150    

Antigen sequence

KNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVDLQRKN
QDLKMKVEMMSEAALNGNGDDLNNYDSDDQEKQSKKKPRLFCDICDCFDL
HDTEDCPTQAQMSEDPPHSTHHGSRGEERPYCEICEMFGHWATNCNDDET
   

Matching transcripts

CLIP1-001 - ENSP00000303585 [100%]
CLIP1-002 - ENSP00000445531 [100%]
CLIP1-003 - ENSP00000439093 [100%]
CLIP1-007 - ENSP00000355314 [100%]
CLIP1-008 - ENSP00000438743 [100%]
CLIP1-201 - ENSP00000351665 [100%]
CLIP1-202 - ENSP00000479322 [100%]
   

Other gene match

   
ANTIGEN VIEW
CLIP1-001
CLIP1-002
CLIP1-003
CLIP1-007
CLIP1-008
CLIP1-201
CLIP1-202
 

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