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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.2TPM
GTEx:22.9RPKM
FANTOM5:18.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA038135

 

Antibody HPA038136

 

Antibody CAB017187

 

Adipocytes

Not detected   Not detected   Low  

Glandular cells

Medium   Medium   Medium  

Myoepithelial cells

Low   Medium   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

7.2

overview Female, age 52
Sample 1
TPM: 8.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 9.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 7.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 3.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

22.9

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 22.9
Samples: 214

Max RPKM: 73.9
Min RPKM: 5.6
Std RPKM: 8.7
Median RPKM: 21.9
GTEX-XUZC-1626-SM-4BRVP 73.9
GTEX-XOT4-0726-SM-4GIAW 51.9
GTEX-132Q8-1426-SM-5EGK7 49.4
GTEX-ZWKS-2826-SM-5NQ74 49.2
GTEX-XQ8I-2426-SM-4WAXY 46.7
GTEX-1117F-2826-SM-5GZXL 45.3
GTEX-X15G-1626-SM-3NMB3 43.9
GTEX-131YS-0626-SM-5EGKL 39.8
GTEX-SIU7-1626-SM-4BRUK 38.6
GTEX-131XW-0726-SM-5EGK3 37.9
GTEX-13FTY-2226-SM-5J1ND 37.5
GTEX-T2IS-1526-SM-32QPR 37.4
GTEX-QVJO-1826-SM-447C9 37.3
GTEX-1269C-2426-SM-5FQSN 36.1
GTEX-WXYG-2226-SM-4E3IM 36.0
GTEX-XMD1-0826-SM-4AT52 34.8
GTEX-XMD2-0926-SM-4WWEF 34.3
GTEX-ZVE2-1226-SM-5NQ8R 34.1
GTEX-133LE-1726-SM-5K7VQ 33.7
GTEX-ZLV1-1426-SM-4WWES 33.6
GTEX-S32W-2026-SM-4AD6E 33.4
GTEX-WYBS-0926-SM-3NM94 33.4
GTEX-RU72-0626-SM-46MUI 33.2
GTEX-XUW1-2326-SM-4BOO5 32.8
GTEX-S341-1526-SM-4AD6K 32.2
GTEX-11NV4-2026-SM-5N9DG 31.9
GTEX-11EMC-2026-SM-5A5JV 31.8
GTEX-13QIC-2326-SM-5LU5N 31.8
GTEX-145MO-0826-SM-5NQBL 31.6
GTEX-REY6-2426-SM-48FF5 31.3
GTEX-U3ZN-1926-SM-4DXSG 31.1
GTEX-117XS-1926-SM-5GICO 30.3
GTEX-11GSO-1926-SM-5A5K3 30.1
GTEX-11LCK-2426-SM-5HL5F 30.1
GTEX-Y8LW-1626-SM-5IFHX 30.0
GTEX-ZAB4-2526-SM-5HL8M 30.0
GTEX-111YS-1926-SM-5GICC 29.6
GTEX-12WSB-0626-SM-59HJO 29.5
GTEX-ZZPU-0626-SM-5E43T 29.5
GTEX-T2YK-2226-SM-32QPT 29.0
GTEX-WYVS-1726-SM-3NMAY 28.9
GTEX-1192X-2326-SM-5987X 28.5
GTEX-13113-1726-SM-5GCOO 28.2
GTEX-13N11-1726-SM-5J1OJ 27.9
GTEX-R3RS-0626-SM-48FE1 27.7
GTEX-U3ZH-1426-SM-4DXSR 27.7
GTEX-S4Q7-1126-SM-4AD6R 27.6
GTEX-139TU-0626-SM-5KM3X 27.5
GTEX-Q2AG-0326-SM-48U1O 27.3
GTEX-ZF29-1926-SM-5S2P1 27.2
GTEX-12WSM-1726-SM-5BC6J 27.1
GTEX-11EM3-1326-SM-5N9C6 26.8
GTEX-13PL6-2926-SM-5L3I2 26.8
GTEX-11DZ1-0326-SM-5N9BN 26.7
GTEX-WOFL-0826-SM-3MJG1 26.7
GTEX-YFC4-1426-SM-5IFJG 26.6
GTEX-UJHI-1426-SM-3DB9C 26.4
GTEX-Y111-2026-SM-4SOJA 26.4
GTEX-11P7K-0726-SM-5EGKX 26.2
GTEX-12WSN-1326-SM-5GCNT 26.2
GTEX-139T8-0826-SM-5L3DE 26.2
GTEX-XUJ4-1926-SM-4BOOV 26.2
GTEX-S4P3-1326-SM-4AD6V 26.0
GTEX-ZF2S-2026-SM-5E461 26.0
GTEX-T6MO-0326-SM-32QOK 25.9
GTEX-12ZZX-1126-SM-5EGKB 25.8
GTEX-ZUA1-1526-SM-59HLS 25.7
GTEX-13D11-1026-SM-5IJFB 25.6
GTEX-X4EP-2926-SM-3P5YQ 25.5
GTEX-11PRG-0826-SM-5EQ6A 25.4
GTEX-ZC5H-2626-SM-5J2MG 25.4
GTEX-1399U-1826-SM-5PNZ1 25.2
GTEX-WY7C-2726-SM-3NB3P 25.1
GTEX-WYJK-1326-SM-3NB2T 25.1
GTEX-13OW5-2226-SM-5L3HC 24.8
GTEX-13OW8-0226-SM-5K7UP 24.8
GTEX-13CF2-2026-SM-5K7VI 24.7
GTEX-PSDG-1626-SM-48TCQ 24.6
GTEX-R53T-1526-SM-48FEK 24.3
GTEX-XGQ4-0926-SM-4AT4U 24.3
GTEX-ZV7C-1826-SM-5NQ83 24.3
GTEX-TKQ1-0226-SM-33HB5 24.2
GTEX-X261-0626-SM-3NMD9 24.1
GTEX-11GS4-2126-SM-5A5KR 24.0
GTEX-ZY6K-1626-SM-5GZWV 24.0
GTEX-145ME-1526-SM-5Q5F2 23.9
GTEX-RUSQ-2026-SM-4GIAK 23.9
GTEX-145MN-1926-SM-5SIAI 23.6
GTEX-Y3IK-2326-SM-4WWDT 23.6
GTEX-ZV6S-1826-SM-5NQ8D 23.6
GTEX-T5JC-2126-SM-32PMO 23.5
GTEX-ZXES-0826-SM-5E43C 23.4
GTEX-11EI6-0626-SM-5985T 23.2
GTEX-14AS3-1626-SM-5S2OY 23.2
GTEX-11ZUS-0826-SM-5FQUY 22.9
GTEX-XQ3S-1326-SM-4BOPQ 22.9
GTEX-S4UY-0726-SM-4AD6X 22.7
GTEX-ZVT4-1026-SM-57WC4 22.6
GTEX-11WQC-1726-SM-5GU4W 22.5
GTEX-11DXY-2326-SM-5GICW 22.3
GTEX-ZDYS-1126-SM-5K7UB 22.3
GTEX-ZVZQ-0826-SM-51MRF 22.3
GTEX-UPK5-2326-SM-3P5Z8 22.2
GTEX-XBED-1626-SM-47JYN 22.2
GTEX-13W3W-1226-SM-5LU4H 22.0
GTEX-TML8-1226-SM-32QON 22.0
GTEX-ZF3C-2326-SM-5S2MZ 22.0
GTEX-QDT8-0626-SM-48TYW 21.9
GTEX-11EQ9-1826-SM-5Q5AJ 21.7
GTEX-11NSD-0926-SM-5N9DR 21.7
GTEX-WRHU-0326-SM-3MJFY 21.7
GTEX-ZVT2-1826-SM-5NQ8W 21.7
GTEX-QEL4-2126-SM-447AE 21.6
GTEX-ZZ64-1226-SM-5E43R 21.6
GTEX-13NZ8-0126-SM-5IJCT 21.5
GTEX-T5JW-2026-SM-4DM63 21.5
GTEX-YEC3-1026-SM-5IFI5 21.1
GTEX-RWS6-1926-SM-47JXY 21.0
GTEX-S7SE-0826-SM-4AT4D 20.9
GTEX-12WSK-2226-SM-5GCO5 20.7
GTEX-Y9LG-1426-SM-5IFJZ 20.7
GTEX-YFCO-1826-SM-4W1YH 20.7
GTEX-1122O-1226-SM-5H113 20.6
GTEX-WI4N-1426-SM-3LK7H 20.5
GTEX-ZVTK-0326-SM-51MRR 20.5
GTEX-ZYT6-0126-SM-5E45J 20.5
GTEX-11I78-2226-SM-5PNYA 20.1
GTEX-R55F-1726-SM-2TF4R 20.1
GTEX-U412-1826-SM-4DXTJ 20.1
GTEX-11OF3-1926-SM-59889 20.0
GTEX-13CF3-2126-SM-5IFJP 19.9
GTEX-UTHO-1026-SM-3GAF7 19.9
GTEX-ZQG8-0726-SM-5P9H9 19.9
GTEX-SE5C-2126-SM-4BRUJ 19.8
GTEX-Y5LM-1726-SM-4VDSX 19.8
GTEX-ZAJG-0626-SM-5HL8X 19.7
GTEX-ZYFC-0826-SM-5E44K 19.5
GTEX-TMMY-0726-SM-33HBE 19.2
GTEX-XV7Q-2326-SM-4BRVZ 19.2
GTEX-ZDTT-2126-SM-5S2OJ 19.1
GTEX-Y5V5-2126-SM-4WWFO 18.9
GTEX-YB5E-1726-SM-5IFJ3 18.8
GTEX-Y114-2026-SM-4TT7L 18.6
GTEX-Y5V6-2126-SM-4WWFX 18.6
GTEX-13NZ9-1026-SM-5MR5K 18.5
GTEX-QMRM-1626-SM-4R1KV 18.4
GTEX-ZYW4-0826-SM-5GIDG 18.4
GTEX-13FHO-0826-SM-5L3E8 18.3
GTEX-ZTX8-1226-SM-4YCE9 18.3
GTEX-13NZB-2126-SM-5MR4Y 18.2
GTEX-13O61-1826-SM-5KM4I 18.2
GTEX-11P82-1326-SM-5HL62 18.0
GTEX-11P81-1926-SM-5BC53 17.9
GTEX-VJWN-0726-SM-3GIJ8 17.9
GTEX-12KS4-0126-SM-5Q5A5 17.8
GTEX-R55D-0826-SM-48FEA 17.8
GTEX-T6MN-0726-SM-32PML 17.6
GTEX-13FTX-1126-SM-5N9EN 17.4
GTEX-146FH-0826-SM-5SI8T 17.3
GTEX-YJ8O-2226-SM-5IFHW 17.3
GTEX-ZQUD-1926-SM-51MSA 17.3
GTEX-14E6E-1326-SM-5S2NR 17.1
GTEX-ZT9W-2026-SM-51MRA 16.9
GTEX-13O3Q-2226-SM-5KM4O 16.7
GTEX-145LT-0726-SM-5S2VM 16.3
GTEX-11O72-2126-SM-5N9FO 16.2
GTEX-13O3O-0826-SM-5K7WE 16.2
GTEX-144GL-2026-SM-5LU3O 16.2
GTEX-ZEX8-2226-SM-57WC6 16.2
GTEX-14ABY-2126-SM-5QGQZ 16.0
GTEX-11ONC-2126-SM-5HL6E 15.9
GTEX-11ZTT-2326-SM-5EQLG 15.9
GTEX-ZPIC-1126-SM-5BC7F 15.9
GTEX-14753-2426-SM-5LU8U 15.8
GTEX-ZYWO-2326-SM-5GZY4 15.8
GTEX-VUSG-2226-SM-4KKZO 15.7
GTEX-XYKS-1326-SM-4BRUN 15.7
GTEX-13W46-0826-SM-5LU3H 15.6
GTEX-11TT1-2126-SM-5GU5Y 15.3
GTEX-QEG5-0726-SM-4R1JQ 15.3
GTEX-147F4-2826-SM-5NQBN 15.2
GTEX-11DXW-0626-SM-5N9ER 15.1
GTEX-12BJ1-1826-SM-5HL9N 15.1
GTEX-11DXZ-1926-SM-5GZZL 15.0
GTEX-1313W-0826-SM-5EQ4T 15.0
GTEX-1314G-1226-SM-5BC6D 14.9
GTEX-1211K-1926-SM-5EQLB 14.7
GTEX-139T6-1626-SM-5PNYZ 14.7
GTEX-Y3I4-1526-SM-4TT7K 14.7
GTEX-ZU9S-1926-SM-5NQBP 14.6
GTEX-13FTW-1426-SM-5LZWZ 14.5
GTEX-13S86-1226-SM-5S2OA 14.3
GTEX-132NY-0826-SM-5K7Y7 14.2
GTEX-13O3P-0826-SM-5L3DH 14.1
GTEX-WFON-1826-SM-3GILG 14.1
GTEX-ZA64-1526-SM-5CVMD 14.1
GTEX-ZLFU-2126-SM-4WWEV 14.1
GTEX-117YX-1426-SM-5H12H 13.6
GTEX-YB5K-1626-SM-5IFIN 13.6
GTEX-ZTTD-1026-SM-51MRD 13.4
GTEX-Y8E4-1626-SM-5S2MW 11.8
GTEX-XMK1-1126-SM-4IHJ8 11.7
GTEX-S33H-0326-SM-4AD6N 11.5
GTEX-132AR-0826-SM-5EGK6 11.3
GTEX-X4XY-0926-SM-4E3JD 10.9
GTEX-ZDXO-0126-SM-5S2ND 9.9
GTEX-11WQK-2426-SM-5GU5C 9.6
GTEX-TKQ2-1826-SM-33HB2 8.7
GTEX-11TUW-1826-SM-5BC5D 7.9
GTEX-W5X1-2326-SM-3GIL6 7.7
GTEX-13N1W-0626-SM-5MR4U 7.6
GTEX-13PVQ-1026-SM-5KM3M 7.4
GTEX-144GM-0926-SM-5O994 6.1
GTEX-U8XE-0826-SM-4E3J1 5.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

18.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 18.9
FF:10080-102A8 77 years, female 18.9

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